RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 ITGAEP38570 1179 aa13.26□□□□□ -0.29
RNU1-28P-201ENST00000383861 CAMSAP2Q08AD1 1489 aa13.26□□□□□ -0.29
RNU1-28P-201ENST00000383861 TTC37Q6PGP7 1564 aa13.26□□□□□ -0.29
RNU1-28P-201ENST00000383861 ABCA9Q8IUA7 1624 aa13.26□□□□□ -0.29
RNU1-28P-201ENST00000383861 MYO5CQ9NQX4 1742 aa13.26□□□□□ -0.29
RNU1-28P-201ENST00000383861 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
RNU1-28P-201ENST00000383861 ARHGAP5Q13017 1502 aa13.25□□□□□ -0.29
RNU1-28P-201ENST00000383861 DNAJC5Q9H3Z4 198 aa13.24□□□□□ -0.29
RNU1-28P-201ENST00000383861 KIAA1107Q9UPP5 1409 aa13.23□□□□□ -0.29
RNU1-28P-201ENST00000383861 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
RNU1-28P-201ENST00000383861 DAPK1P53355 1430 aa13.22□□□□□ -0.29
RNU1-28P-201ENST00000383861 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
RNU1-28P-201ENST00000383861 HRCP23327 699 aa13.22□□□□□ -0.29
RNU1-28P-201ENST00000383861 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
RNU1-28P-201ENST00000383861 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
RNU1-28P-201ENST00000383861 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
RNU1-28P-201ENST00000383861 GLI2P10070 1586 aa13.21□□□□□ -0.29
RNU1-28P-201ENST00000383861 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
RNU1-28P-201ENST00000383861 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
RNU1-28P-201ENST00000383861 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
RNU1-28P-201ENST00000383861 TSPY4P0CV99 314 aa13.2□□□□□ -0.3
RNU1-28P-201ENST00000383861 TSPY10P0CW01 314 aa13.2□□□□□ -0.3
RNU1-28P-201ENST00000383861 ABCC5O15440 1437 aa13.2□□□□□ -0.3
RNU1-28P-201ENST00000383861 SETD5Q9C0A6 1442 aa13.2□□□□□ -0.3
RNU1-28P-201ENST00000383861 SAMD9LQ8IVG5 1584 aa13.19□□□□□ -0.3
RNU1-28P-201ENST00000383861 FANCAO15360 1455 aa13.18□□□□□ -0.3
RNU1-28P-201ENST00000383861 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
RNU1-28P-201ENST00000383861 HFM1A2PYH4 1435 aa13.18□□□□□ -0.3
RNU1-28P-201ENST00000383861 CFAP74Q9C0B2 1584 aa13.18□□□□□ -0.3
RNU1-28P-201ENST00000383861 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
RNU1-28P-201ENST00000383861 PTPRKQ15262 1439 aa13.17□□□□□ -0.3
RNU1-28P-201ENST00000383861 HNRNPMP52272 730 aaKnown RBP eCLIP13.17□□□□□ -0.3
RNU1-28P-201ENST00000383861 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
RNU1-28P-201ENST00000383861 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
RNU1-28P-201ENST00000383861 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
RNU1-28P-201ENST00000383861 ADGRL2O95490 1459 aa13.15□□□□□ -0.3
RNU1-28P-201ENST00000383861 NEO1Q92859 1461 aa13.15□□□□□ -0.3
RNU1-28P-201ENST00000383861 ABCC1P33527 1531 aa13.14□□□□□ -0.31
RNU1-28P-201ENST00000383861 CHIC2Q9UKJ5 165 aa13.14□□□□□ -0.31
RNU1-28P-201ENST00000383861 DIP2BQ9P265 1576 aa13.14□□□□□ -0.31
RNU1-28P-201ENST00000383861 NAIPQ13075 1403 aa13.13□□□□□ -0.31
RNU1-28P-201ENST00000383861 C9orf84Q5VXU9 1444 aa13.13□□□□□ -0.31
RNU1-28P-201ENST00000383861 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
RNU1-28P-201ENST00000383861 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
RNU1-28P-201ENST00000383861 CROCC2H7BZ55 1655 aa13.13□□□□□ -0.31
RNU1-28P-201ENST00000383861 RAB3GAP2Q9H2M9 1393 aa13.13□□□□□ -0.31
RNU1-28P-201ENST00000383861 ADGRL1O94910 1474 aa13.12□□□□□ -0.31
RNU1-28P-201ENST00000383861 NCOA1Q15788 1441 aa13.12□□□□□ -0.31
RNU1-28P-201ENST00000383861 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
RNU1-28P-201ENST00000383861 TEX14Q8IWB6 1497 aa13.11□□□□□ -0.31
RNU1-28P-201ENST00000383861 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
RNU1-28P-201ENST00000383861 RRP7BPQ9NSQ0 103 aa13.11□□□□□ -0.31
RNU1-28P-201ENST00000383861 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
RNU1-28P-201ENST00000383861 SCAPERQ9BY12 1400 aa13.11□□□□□ -0.31
RNU1-28P-201ENST00000383861 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
RNU1-28P-201ENST00000383861 ZEB1P37275 1124 aaPredicted RBP13.1□□□□□ -0.31
RNU1-28P-201ENST00000383861 ARHGEF12Q9NZN5 1544 aa13.09□□□□□ -0.31
RNU1-28P-201ENST00000383861 GCC2Q8IWJ2 1684 aa13.09□□□□□ -0.31
RNU1-28P-201ENST00000383861 SPAG9O60271 1321 aaKnown RBP13.09□□□□□ -0.31
RNU1-28P-201ENST00000383861 ZNF518AQ6AHZ1 1483 aa13.08□□□□□ -0.32
RNU1-28P-201ENST00000383861 CLSPNQ9HAW4 1339 aa13.08□□□□□ -0.32
RNU1-28P-201ENST00000383861 TRAPPC8Q9Y2L5 1435 aa13.07□□□□□ -0.32
RNU1-28P-201ENST00000383861 DENND4BO75064 1496 aaPredicted RBP13.06□□□□□ -0.32
RNU1-28P-201ENST00000383861 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
RNU1-28P-201ENST00000383861 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
RNU1-28P-201ENST00000383861 PLXNC1O60486 1568 aa13.05□□□□□ -0.32
RNU1-28P-201ENST00000383861 POGZQ7Z3K3 1410 aa13.05□□□□□ -0.32
RNU1-28P-201ENST00000383861 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
RNU1-28P-201ENST00000383861 DHX57Q6P158 1386 aaKnown RBP13.03□□□□□ -0.32
RNU1-28P-201ENST00000383861 MYT1LQ9UL68 1186 aa13.02□□□□□ -0.33
RNU1-28P-201ENST00000383861 MLH3Q9UHC1 1453 aa13.02□□□□□ -0.33
RNU1-28P-201ENST00000383861 DUOX2Q9NRD8 1548 aa13.02□□□□□ -0.33
RNU1-28P-201ENST00000383861 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
RNU1-28P-201ENST00000383861 ERBINQ96RT1 1412 aa13.01□□□□□ -0.33
RNU1-28P-201ENST00000383861 ATP7AQ04656 1500 aa13.01□□□□□ -0.33
RNU1-28P-201ENST00000383861 KDM5CP41229 1560 aa13.01□□□□□ -0.33
RNU1-28P-201ENST00000383861 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
RNU1-28P-201ENST00000383861 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
RNU1-28P-201ENST00000383861 INO80Q9ULG1 1556 aaPredicted RBP12.99□□□□□ -0.33
RNU1-28P-201ENST00000383861 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
RNU1-28P-201ENST00000383861 PPRC1Q5VV67 1664 aaKnown RBP12.98□□□□□ -0.33
RNU1-28P-201ENST00000383861 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
RNU1-28P-201ENST00000383861 HECW2Q9P2P5 1572 aa12.97□□□□□ -0.33
RNU1-28P-201ENST00000383861 DHX29Q7Z478 1369 aaKnown RBP12.96□□□□□ -0.33
RNU1-28P-201ENST00000383861 RAPGEF3O95398 923 aa12.96□□□□□ -0.33
RNU1-28P-201ENST00000383861 KDM6BO15054 1643 aa12.95□□□□□ -0.34
RNU1-28P-201ENST00000383861 TSPOAP1O95153 1857 aa12.95□□□□□ -0.34
RNU1-28P-201ENST00000383861 MPHOSPH9Q99550 1183 aa12.95□□□□□ -0.34
RNU1-28P-201ENST00000383861 ZMYM4Q5VZL5 1548 aa12.94□□□□□ -0.34
RNU1-28P-201ENST00000383861 RICTORQ6R327 1708 aa12.94□□□□□ -0.34
RNU1-28P-201ENST00000383861 KIDINS220Q9ULH0 1771 aa12.94□□□□□ -0.34
RNU1-28P-201ENST00000383861 NUP155O75694 1391 aa12.94□□□□□ -0.34
RNU1-28P-201ENST00000383861 A2MP01023 1474 aa12.93□□□□□ -0.34
RNU1-28P-201ENST00000383861 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
RNU1-28P-201ENST00000383861 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
RNU1-28P-201ENST00000383861 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
RNU1-28P-201ENST00000383861 KANK1Q14678 1352 aa12.91□□□□□ -0.34
RNU1-28P-201ENST00000383861 UNC13BO14795 1591 aa12.9□□□□□ -0.34
RNU1-28P-201ENST00000383861 FRMPD1Q5SYB0 1578 aa12.9□□□□□ -0.34
RNU1-28P-201ENST00000383861 KIF3BO15066 747 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms