RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 CEP162Q5TB80 1403 aa29.37■■■□□ 2.29
CD9-204ENST00000382519 CDC42BPBQ9Y5S2 1711 aa29.36■■■□□ 2.29
CD9-204ENST00000382519 POGZQ7Z3K3 1410 aa29.36■■■□□ 2.29
CD9-204ENST00000382519 ZFYVE16Q7Z3T8 1539 aa29.35■■■□□ 2.29
CD9-204ENST00000382519 PREX2Q70Z35 1606 aa29.34■■■□□ 2.29
CD9-204ENST00000382519 BCORL1Q5H9F3 1711 aa29.31■■■□□ 2.28
CD9-204ENST00000382519 ARID4BQ4LE39 1312 aaPredicted RBP29.31■■■□□ 2.28
CD9-204ENST00000382519 ADAMTSL3P82987 1691 aa29.31■■■□□ 2.28
CD9-204ENST00000382519 CDC42BPAQ5VT25 1732 aa29.3■■■□□ 2.28
CD9-204ENST00000382519 MAGI2Q86UL8 1455 aa29.29■■■□□ 2.28
CD9-204ENST00000382519 YEATS2Q9ULM3 1422 aa29.28■■■□□ 2.28
CD9-204ENST00000382519 MADDQ8WXG6 1647 aa29.23■■■□□ 2.27
CD9-204ENST00000382519 ZNF518AQ6AHZ1 1483 aa29.23■■■□□ 2.27
CD9-204ENST00000382519 SIGLEC1Q9BZZ2 1709 aa29.23■■■□□ 2.27
CD9-204ENST00000382519 ITSN2Q9NZM3 1697 aa29.21■■■□□ 2.27
CD9-204ENST00000382519 ABCC1P33527 1531 aa29.2■■■□□ 2.27
CD9-204ENST00000382519 KDM5CP41229 1560 aa29.2■■■□□ 2.26
CD9-204ENST00000382519 MTUS2Q5JR59 1369 aa29.18■■■□□ 2.26
CD9-204ENST00000382519 HECW2Q9P2P5 1572 aa29.18■■■□□ 2.26
CD9-204ENST00000382519 PTPRMP28827 1452 aa29.17■■■□□ 2.26
CD9-204ENST00000382519 LOC105371045A0A1W2PR82 267 aa29.17■■■□□ 2.26
CD9-204ENST00000382519 RIMS1Q86UR5 1692 aaKnown RBP29.16■■■□□ 2.26
CD9-204ENST00000382519 EHBP1L1Q8N3D4 1523 aa29.14■■■□□ 2.25
CD9-204ENST00000382519 AFAP1Q8N556 730 aa29.13■■■□□ 2.25
CD9-204ENST00000382519 C9orf84Q5VXU9 1444 aa29.12■■■□□ 2.25
CD9-204ENST00000382519 ATP10AO60312 1499 aa29.12■■■□□ 2.25
CD9-204ENST00000382519 ARHGEF12Q9NZN5 1544 aa29.12■■■□□ 2.25
CD9-204ENST00000382519 GPATCH8Q9UKJ3 1502 aaKnown RBP29.12■■■□□ 2.25
CD9-204ENST00000382519 MYT1LQ9UL68 1186 aa29.12■■■□□ 2.25
CD9-204ENST00000382519 SAMD9LQ8IVG5 1584 aa29.12■■■□□ 2.25
CD9-204ENST00000382519 TRAPPC8Q9Y2L5 1435 aa29.1■■■□□ 2.25
CD9-204ENST00000382519 ZNF777Q9ULD5 760 aaPredicted RBP29.09■■■□□ 2.25
CD9-204ENST00000382519 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
CD9-204ENST00000382519 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
CD9-204ENST00000382519 FER1L4A9Z1Z3 1794 aa29.08■■■□□ 2.25
CD9-204ENST00000382519 ABCA6Q8N139 1617 aa29.08■■■□□ 2.25
CD9-204ENST00000382519 SYCP2Q9BX26 1530 aa29.06■■■□□ 2.24
CD9-204ENST00000382519 MLECQ14165 292 aa29.05■■■□□ 2.24
CD9-204ENST00000382519 TIAM1Q13009 1591 aa29.05■■■□□ 2.24
CD9-204ENST00000382519 MLH3Q9UHC1 1453 aa29.04■■■□□ 2.24
CD9-204ENST00000382519 VPS8Q8N3P4 1428 aa29.03■■■□□ 2.24
CD9-204ENST00000382519 CFDP1Q9UEE9 299 aaPredicted RBP29.02■■■□□ 2.24
CD9-204ENST00000382519 KIDINS220Q9ULH0 1771 aa29.01■■■□□ 2.23
CD9-204ENST00000382519 REREQ9P2R6 1566 aa29■■■□□ 2.23
CD9-204ENST00000382519 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
CD9-204ENST00000382519 PLEKHH2Q8IVE3 1493 aa28.98■■■□□ 2.23
CD9-204ENST00000382519 PLPPR3Q6T4P5 718 aa28.96■■■□□ 2.23
CD9-204ENST00000382519 HNRNPMP52272 730 aaKnown RBP eCLIP28.94■■■□□ 2.22
CD9-204ENST00000382519 KIAA1107Q9UPP5 1409 aa28.94■■■□□ 2.22
CD9-204ENST00000382519 NCOA2Q15596 1464 aa28.92■■■□□ 2.22
CD9-204ENST00000382519 ATP7AQ04656 1500 aa28.9■■■□□ 2.22
CD9-204ENST00000382519 SPAG9O60271 1321 aaKnown RBP28.9■■■□□ 2.22
CD9-204ENST00000382519 INO80Q9ULG1 1556 aaPredicted RBP28.89■■■□□ 2.22
CD9-204ENST00000382519 AGLP35573 1532 aa28.88■■■□□ 2.21
CD9-204ENST00000382519 LRRC9Q6ZRR7 1453 aa28.85■■■□□ 2.21
CD9-204ENST00000382519 ZNF644Q9H582 1327 aaPredicted RBP28.85■■■□□ 2.21
CD9-204ENST00000382519 LMTK3Q96Q04 1460 aa28.85■■■□□ 2.21
CD9-204ENST00000382519 MAP3K1Q13233 1512 aa28.81■■■□□ 2.2
CD9-204ENST00000382519 CAMSAP2Q08AD1 1489 aa28.8■■■□□ 2.2
CD9-204ENST00000382519 MBD5Q9P267 1494 aa28.78■■■□□ 2.2
CD9-204ENST00000382519 ADGBQ8N7X0 1667 aa28.78■■■□□ 2.2
CD9-204ENST00000382519 PLXNC1O60486 1568 aa28.75■■■□□ 2.19
CD9-204ENST00000382519 PREX1Q8TCU6 1659 aa28.75■■■□□ 2.19
CD9-204ENST00000382519 ESF1Q9H501 851 aaKnown RBP28.75■■■□□ 2.19
CD9-204ENST00000382519 C3P01024 1663 aa28.74■■■□□ 2.19
CD9-204ENST00000382519 A2MP01023 1474 aa28.74■■■□□ 2.19
CD9-204ENST00000382519 CEBPAP49715 358 aaPredicted RBP28.74■■■□□ 2.19
CD9-204ENST00000382519 CCDC141Q6ZP82 1450 aa28.73■■■□□ 2.19
CD9-204ENST00000382519 KANK4Q5T7N3 995 aaPredicted RBP28.72■■■□□ 2.19
CD9-204ENST00000382519 HSPA2P54652 639 aa28.68■■■□□ 2.18
CD9-204ENST00000382519 RTEL1-TNFRSF6BF6WH68 1400 aa28.68■■■□□ 2.18
CD9-204ENST00000382519 CNTLNQ9NXG0 1405 aa28.68■■■□□ 2.18
CD9-204ENST00000382519 ARHGEF5Q12774 1597 aa28.67■■■□□ 2.18
CD9-204ENST00000382519 APLP2Q06481 763 aa28.67■■■□□ 2.18
CD9-204ENST00000382519 MROH2AA6NES4 1674 aa28.66■■■□□ 2.18
CD9-204ENST00000382519 MYOM3Q5VTT5 1437 aa28.64■■■□□ 2.18
CD9-204ENST00000382519 CLTCQ00610 1675 aaKnown RBP28.64■■■□□ 2.17
CD9-204ENST00000382519 SETD1BQ9UPS6 1966 aaKnown RBP28.62■■■□□ 2.17
CD9-204ENST00000382519 RSPH4AQ5TD94 716 aa28.61■■■□□ 2.17
CD9-204ENST00000382519 UHRF1BP1Q6BDS2 1440 aa28.6■■■□□ 2.17
CD9-204ENST00000382519 MIA2Q96PC5 1412 aa28.58■■■□□ 2.17
CD9-204ENST00000382519 GGT6Q6P531 493 aa28.57■■■□□ 2.16
CD9-204ENST00000382519 DHX29Q7Z478 1369 aaKnown RBP28.55■■■□□ 2.16
CD9-204ENST00000382519 TSPY4P0CV99 314 aa28.54■■■□□ 2.16
CD9-204ENST00000382519 TSPY10P0CW01 314 aa28.54■■■□□ 2.16
CD9-204ENST00000382519 MAST1Q9Y2H9 1570 aa28.53■■■□□ 2.16
CD9-204ENST00000382519 ZMYM3Q14202 1370 aa28.51■■■□□ 2.16
CD9-204ENST00000382519 PTPN23Q9H3S7 1636 aa28.51■■■□□ 2.15
CD9-204ENST00000382519 NPATQ14207 1427 aa28.48■■■□□ 2.15
CD9-204ENST00000382519 KIF3BO15066 747 aa28.47■■■□□ 2.15
CD9-204ENST00000382519 CROCC2H7BZ55 1655 aa28.47■■■□□ 2.15
CD9-204ENST00000382519 ILDR1Q86SU0 546 aaPredicted RBP28.46■■■□□ 2.15
CD9-204ENST00000382519 PPP6R1Q9UPN7 881 aa28.45■■■□□ 2.14
CD9-204ENST00000382519 STRCQ7RTU9 1775 aa28.45■■■□□ 2.14
CD9-204ENST00000382519 MYO3AQ8NEV4 1616 aa28.43■■■□□ 2.14
CD9-204ENST00000382519 KDM5DQ9BY66 1539 aa28.43■■■□□ 2.14
CD9-204ENST00000382519 FGD6Q6ZV73 1430 aa28.42■■■□□ 2.14
CD9-204ENST00000382519 FAM135AQ9P2D6 1515 aa28.41■■■□□ 2.14
CD9-204ENST00000382519 PTPRKQ15262 1439 aa28.41■■■□□ 2.14
CD9-204ENST00000382519 EIF2AK4Q9P2K8 1649 aaKnown RBP28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms