RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 FANCAO15360 1455 aa23.96■■□□□ 1.43
PDGFB-202ENST00000381551 CDC42BPBQ9Y5S2 1711 aa23.95■■□□□ 1.42
PDGFB-202ENST00000381551 NEO1Q92859 1461 aa23.94■■□□□ 1.42
PDGFB-202ENST00000381551 PHLDB1Q86UU1 1377 aa23.94■■□□□ 1.42
PDGFB-202ENST00000381551 ARHGAP5Q13017 1502 aa23.94■■□□□ 1.42
PDGFB-202ENST00000381551 PREX2Q70Z35 1606 aa23.93■■□□□ 1.42
PDGFB-202ENST00000381551 AKNAQ7Z591 1439 aa23.93■■□□□ 1.42
PDGFB-202ENST00000381551 ZNF777Q9ULD5 760 aaPredicted RBP23.91■■□□□ 1.42
PDGFB-202ENST00000381551 MYOM3Q5VTT5 1437 aa23.9■■□□□ 1.42
PDGFB-202ENST00000381551 ZNF644Q9H582 1327 aaPredicted RBP23.87■■□□□ 1.41
PDGFB-202ENST00000381551 ITSN2Q9NZM3 1697 aa23.87■■□□□ 1.41
PDGFB-202ENST00000381551 COL17A1Q9UMD9 1497 aaPredicted RBP23.87■■□□□ 1.41
PDGFB-202ENST00000381551 MIA2Q96PC5 1412 aa23.86■■□□□ 1.41
PDGFB-202ENST00000381551 CFAP74Q9C0B2 1584 aa23.86■■□□□ 1.41
PDGFB-202ENST00000381551 SCAPERQ9BY12 1400 aa23.84■■□□□ 1.41
PDGFB-202ENST00000381551 ADGRL1O94910 1474 aa23.83■■□□□ 1.41
PDGFB-202ENST00000381551 RAPGEF3O95398 923 aa23.81■■□□□ 1.4
PDGFB-202ENST00000381551 HNRNPMP52272 730 aaKnown RBP eCLIP23.81■■□□□ 1.4
PDGFB-202ENST00000381551 SAMD9LQ8IVG5 1584 aa23.81■■□□□ 1.4
PDGFB-202ENST00000381551 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
PDGFB-202ENST00000381551 KIAA1107Q9UPP5 1409 aa23.8■■□□□ 1.4
PDGFB-202ENST00000381551 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
PDGFB-202ENST00000381551 DENND4BO75064 1496 aaPredicted RBP23.78■■□□□ 1.4
PDGFB-202ENST00000381551 PLEKHH2Q8IVE3 1493 aa23.78■■□□□ 1.4
PDGFB-202ENST00000381551 KDM6BO15054 1643 aa23.77■■□□□ 1.4
PDGFB-202ENST00000381551 ABCC1P33527 1531 aa23.76■■□□□ 1.39
PDGFB-202ENST00000381551 AFAP1Q8N556 730 aa23.76■■□□□ 1.39
PDGFB-202ENST00000381551 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
PDGFB-202ENST00000381551 TRAPPC8Q9Y2L5 1435 aa23.74■■□□□ 1.39
PDGFB-202ENST00000381551 MBD5Q9P267 1494 aa23.74■■□□□ 1.39
PDGFB-202ENST00000381551 RSPH4AQ5TD94 716 aa23.73■■□□□ 1.39
PDGFB-202ENST00000381551 TCOF1Q13428 1488 aaKnown RBP23.73■■□□□ 1.39
PDGFB-202ENST00000381551 PTPN23Q9H3S7 1636 aa23.73■■□□□ 1.39
PDGFB-202ENST00000381551 POGZQ7Z3K3 1410 aa23.72■■□□□ 1.39
PDGFB-202ENST00000381551 SYCP2Q9BX26 1530 aa23.72■■□□□ 1.39
PDGFB-202ENST00000381551 FAM50AQ14320 339 aaKnown RBP23.7■■□□□ 1.38
PDGFB-202ENST00000381551 RICTORQ6R327 1708 aa23.69■■□□□ 1.38
PDGFB-202ENST00000381551 ZNF518AQ6AHZ1 1483 aa23.68■■□□□ 1.38
PDGFB-202ENST00000381551 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
PDGFB-202ENST00000381551 FRMPD1Q5SYB0 1578 aa23.67■■□□□ 1.38
PDGFB-202ENST00000381551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.65■■□□□ 1.38
PDGFB-202ENST00000381551 ARHGEF5Q12774 1597 aa23.64■■□□□ 1.37
PDGFB-202ENST00000381551 TSPY4P0CV99 314 aa23.63■■□□□ 1.37
PDGFB-202ENST00000381551 TSPY10P0CW01 314 aa23.63■■□□□ 1.37
PDGFB-202ENST00000381551 KDM5CP41229 1560 aa23.63■■□□□ 1.37
PDGFB-202ENST00000381551 CCDC141Q6ZP82 1450 aa23.62■■□□□ 1.37
PDGFB-202ENST00000381551 SPAG9O60271 1321 aaKnown RBP23.62■■□□□ 1.37
PDGFB-202ENST00000381551 ABCC5O15440 1437 aa23.61■■□□□ 1.37
PDGFB-202ENST00000381551 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
PDGFB-202ENST00000381551 MAGI2Q86UL8 1455 aa23.61■■□□□ 1.37
PDGFB-202ENST00000381551 MLH3Q9UHC1 1453 aa23.61■■□□□ 1.37
PDGFB-202ENST00000381551 MYT1LQ9UL68 1186 aa23.59■■□□□ 1.37
PDGFB-202ENST00000381551 DAPK1P53355 1430 aa23.58■■□□□ 1.36
PDGFB-202ENST00000381551 RTEL1-TNFRSF6BF6WH68 1400 aa23.56■■□□□ 1.36
PDGFB-202ENST00000381551 DNMT1P26358 1616 aaKnown RBP23.55■■□□□ 1.36
PDGFB-202ENST00000381551 YEATS2Q9ULM3 1422 aa23.55■■□□□ 1.36
PDGFB-202ENST00000381551 ITGAEP38570 1179 aa23.54■■□□□ 1.36
PDGFB-202ENST00000381551 HECW2Q9P2P5 1572 aa23.53■■□□□ 1.36
PDGFB-202ENST00000381551 KIDINS220Q9ULH0 1771 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 C9orf84Q5VXU9 1444 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 CHIC2Q9UKJ5 165 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 ZFYVE16Q7Z3T8 1539 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 ATP7AQ04656 1500 aa23.51■■□□□ 1.35
PDGFB-202ENST00000381551 SHANK2Q9UPX8 1470 aa23.5■■□□□ 1.35
PDGFB-202ENST00000381551 INO80Q9ULG1 1556 aaPredicted RBP23.5■■□□□ 1.35
PDGFB-202ENST00000381551 MAST1Q9Y2H9 1570 aa23.5■■□□□ 1.35
PDGFB-202ENST00000381551 ATP10AO60312 1499 aa23.49■■□□□ 1.35
PDGFB-202ENST00000381551 CROCC2H7BZ55 1655 aa23.47■■□□□ 1.35
PDGFB-202ENST00000381551 DIP2CQ9Y2E4 1556 aa23.45■■□□□ 1.34
PDGFB-202ENST00000381551 ARHGEF40Q8TER5 1519 aa23.45■■□□□ 1.34
PDGFB-202ENST00000381551 NCOA1Q15788 1441 aa23.45■■□□□ 1.34
PDGFB-202ENST00000381551 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
PDGFB-202ENST00000381551 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
PDGFB-202ENST00000381551 RRP7BPQ9NSQ0 103 aa23.44■■□□□ 1.34
PDGFB-202ENST00000381551 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
PDGFB-202ENST00000381551 DHX29Q7Z478 1369 aaKnown RBP23.41■■□□□ 1.34
PDGFB-202ENST00000381551 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
PDGFB-202ENST00000381551 A2MP01023 1474 aa23.4■■□□□ 1.34
PDGFB-202ENST00000381551 PLXNC1O60486 1568 aa23.39■■□□□ 1.33
PDGFB-202ENST00000381551 KIF15Q9NS87 1388 aa23.39■■□□□ 1.33
PDGFB-202ENST00000381551 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
PDGFB-202ENST00000381551 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
PDGFB-202ENST00000381551 ARID4BQ4LE39 1312 aaPredicted RBP23.36■■□□□ 1.33
PDGFB-202ENST00000381551 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
PDGFB-202ENST00000381551 DUOX2Q9NRD8 1548 aa23.33■■□□□ 1.33
PDGFB-202ENST00000381551 SIGLEC1Q9BZZ2 1709 aa23.33■■□□□ 1.33
PDGFB-202ENST00000381551 AGLP35573 1532 aa23.33■■□□□ 1.32
PDGFB-202ENST00000381551 KIF3BO15066 747 aa23.31■■□□□ 1.32
PDGFB-202ENST00000381551 ANKRD50Q9ULJ7 1429 aa23.28■■□□□ 1.32
PDGFB-202ENST00000381551 NAIPQ13075 1403 aa23.27■■□□□ 1.32
PDGFB-202ENST00000381551 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
PDGFB-202ENST00000381551 MLECQ14165 292 aa23.27■■□□□ 1.32
PDGFB-202ENST00000381551 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
PDGFB-202ENST00000381551 GGT6Q6P531 493 aa23.25■■□□□ 1.31
PDGFB-202ENST00000381551 BCORL1Q5H9F3 1711 aa23.22■■□□□ 1.31
PDGFB-202ENST00000381551 PPP6R1Q9UPN7 881 aa23.21■■□□□ 1.31
PDGFB-202ENST00000381551 EIF2AK4Q9P2K8 1649 aaKnown RBP23.21■■□□□ 1.31
PDGFB-202ENST00000381551 KDM4FA0A1W2PPD8 638 aa23.19■■□□□ 1.3
PDGFB-202ENST00000381551 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms