RNA–Protein interactions for RNA: ENST00000381158.3

RAB3C-202, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB3C, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-202ENST00000381158 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
RAB3C-202ENST00000381158 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
RAB3C-202ENST00000381158 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
RAB3C-202ENST00000381158 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
RAB3C-202ENST00000381158 FMN1Q68DA7 1419 aa14.92□□□□□ -0.02
RAB3C-202ENST00000381158 DENND4BO75064 1496 aaPredicted RBP14.91□□□□□ -0.02
RAB3C-202ENST00000381158 KIF14Q15058 1648 aa14.91□□□□□ -0.02
RAB3C-202ENST00000381158 PTPRMP28827 1452 aa14.89□□□□□ -0.03
RAB3C-202ENST00000381158 RIMS1Q86UR5 1692 aaKnown RBP14.87□□□□□ -0.03
RAB3C-202ENST00000381158 PLCH2O75038 1416 aa14.87□□□□□ -0.03
RAB3C-202ENST00000381158 CDC42BPBQ9Y5S2 1711 aa14.86□□□□□ -0.03
RAB3C-202ENST00000381158 ZFYVE16Q7Z3T8 1539 aa14.85□□□□□ -0.03
RAB3C-202ENST00000381158 YEATS2Q9ULM3 1422 aa14.84□□□□□ -0.03
RAB3C-202ENST00000381158 PCF11O94913 1555 aaKnown RBP14.84□□□□□ -0.03
RAB3C-202ENST00000381158 TROQ12816 1431 aaPredicted RBP14.83□□□□□ -0.04
RAB3C-202ENST00000381158 POGZQ7Z3K3 1410 aa14.83□□□□□ -0.04
RAB3C-202ENST00000381158 MAGI2Q86UL8 1455 aa14.82□□□□□ -0.04
RAB3C-202ENST00000381158 ATP1B4Q9UN42 357 aaPredicted RBP14.82□□□□□ -0.04
RAB3C-202ENST00000381158 FER1L4A9Z1Z3 1794 aa14.82□□□□□ -0.04
RAB3C-202ENST00000381158 SCAPERQ9BY12 1400 aa14.82□□□□□ -0.04
RAB3C-202ENST00000381158 ARID4BQ4LE39 1312 aaPredicted RBP14.8□□□□□ -0.04
RAB3C-202ENST00000381158 PREX2Q70Z35 1606 aa14.8□□□□□ -0.04
RAB3C-202ENST00000381158 CDC42BPAQ5VT25 1732 aa14.8□□□□□ -0.04
RAB3C-202ENST00000381158 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
RAB3C-202ENST00000381158 ILDR1Q86SU0 546 aaPredicted RBP14.79□□□□□ -0.04
RAB3C-202ENST00000381158 KDM5CP41229 1560 aa14.78□□□□□ -0.04
RAB3C-202ENST00000381158 CASKIN1Q8WXD9 1431 aa14.78□□□□□ -0.04
RAB3C-202ENST00000381158 DMRT2Q9Y5R5 561 aa14.78□□□□□ -0.04
RAB3C-202ENST00000381158 ARHGAP5Q13017 1502 aa14.77□□□□□ -0.04
RAB3C-202ENST00000381158 LMTK3Q96Q04 1460 aa14.77□□□□□ -0.04
RAB3C-202ENST00000381158 CDK11AQ9UQ88 783 aaPredicted RBP14.77□□□□□ -0.05
RAB3C-202ENST00000381158 ITSN2Q9NZM3 1697 aa14.77□□□□□ -0.05
RAB3C-202ENST00000381158 CLIP1P30622 1438 aa14.76□□□□□ -0.05
RAB3C-202ENST00000381158 EFCAB2Q5VUJ9 269 aa14.76□□□□□ -0.05
RAB3C-202ENST00000381158 CCDC18Q5T9S5 1454 aa14.76□□□□□ -0.05
RAB3C-202ENST00000381158 ATP10AO60312 1499 aa14.75□□□□□ -0.05
RAB3C-202ENST00000381158 ARHGEF12Q9NZN5 1544 aa14.74□□□□□ -0.05
RAB3C-202ENST00000381158 ZNF518AQ6AHZ1 1483 aa14.74□□□□□ -0.05
RAB3C-202ENST00000381158 DIP2CQ9Y2E4 1556 aa14.73□□□□□ -0.05
RAB3C-202ENST00000381158 FYCO1Q9BQS8 1478 aa14.73□□□□□ -0.05
RAB3C-202ENST00000381158 C9orf84Q5VXU9 1444 aa14.73□□□□□ -0.05
RAB3C-202ENST00000381158 ABCA6Q8N139 1617 aa14.73□□□□□ -0.05
RAB3C-202ENST00000381158 ABCC1P33527 1531 aa14.72□□□□□ -0.05
RAB3C-202ENST00000381158 REREQ9P2R6 1566 aa14.71□□□□□ -0.05
RAB3C-202ENST00000381158 KIDINS220Q9ULH0 1771 aa14.7□□□□□ -0.06
RAB3C-202ENST00000381158 AFAP1Q8N556 730 aa14.69□□□□□ -0.06
RAB3C-202ENST00000381158 PREX1Q8TCU6 1659 aa14.68□□□□□ -0.06
RAB3C-202ENST00000381158 MLECQ14165 292 aa14.68□□□□□ -0.06
RAB3C-202ENST00000381158 MLH3Q9UHC1 1453 aa14.68□□□□□ -0.06
RAB3C-202ENST00000381158 SAMD9LQ8IVG5 1584 aa14.68□□□□□ -0.06
RAB3C-202ENST00000381158 TRAPPC8Q9Y2L5 1435 aa14.67□□□□□ -0.06
RAB3C-202ENST00000381158 C3P01024 1663 aa14.65□□□□□ -0.06
RAB3C-202ENST00000381158 AGLP35573 1532 aa14.63□□□□□ -0.07
RAB3C-202ENST00000381158 GPATCH8Q9UKJ3 1502 aaKnown RBP14.63□□□□□ -0.07
RAB3C-202ENST00000381158 RNF216Q9NWF9 866 aaPredicted RBP14.63□□□□□ -0.07
RAB3C-202ENST00000381158 SETD1BQ9UPS6 1966 aaKnown RBP14.63□□□□□ -0.07
RAB3C-202ENST00000381158 HSPA2P54652 639 aa14.62□□□□□ -0.07
RAB3C-202ENST00000381158 SYCP2Q9BX26 1530 aa14.61□□□□□ -0.07
RAB3C-202ENST00000381158 STRCQ7RTU9 1775 aa14.61□□□□□ -0.07
RAB3C-202ENST00000381158 SUPT6HQ7KZ85 1726 aaKnown RBP14.59□□□□□ -0.07
RAB3C-202ENST00000381158 CEBPAP49715 358 aaPredicted RBP14.59□□□□□ -0.07
RAB3C-202ENST00000381158 INO80Q9ULG1 1556 aaPredicted RBP14.59□□□□□ -0.07
RAB3C-202ENST00000381158 TIAM1Q13009 1591 aa14.57□□□□□ -0.08
RAB3C-202ENST00000381158 MYT1LQ9UL68 1186 aa14.57□□□□□ -0.08
RAB3C-202ENST00000381158 MROH2AA6NES4 1674 aa14.57□□□□□ -0.08
RAB3C-202ENST00000381158 FBXO41Q8TF61 875 aa14.56□□□□□ -0.08
RAB3C-202ENST00000381158 ATP7AQ04656 1500 aa14.56□□□□□ -0.08
RAB3C-202ENST00000381158 KIAA1107Q9UPP5 1409 aa14.55□□□□□ -0.08
RAB3C-202ENST00000381158 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
RAB3C-202ENST00000381158 PLXNC1O60486 1568 aa14.55□□□□□ -0.08
RAB3C-202ENST00000381158 ZNF777Q9ULD5 760 aaPredicted RBP14.54□□□□□ -0.08
RAB3C-202ENST00000381158 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
RAB3C-202ENST00000381158 ADGBQ8N7X0 1667 aa14.54□□□□□ -0.08
RAB3C-202ENST00000381158 PLEKHH2Q8IVE3 1493 aa14.53□□□□□ -0.08
RAB3C-202ENST00000381158 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.08
RAB3C-202ENST00000381158 CLTCQ00610 1675 aaKnown RBP14.52□□□□□ -0.08
RAB3C-202ENST00000381158 MTUS2Q5JR59 1369 aa14.52□□□□□ -0.08
RAB3C-202ENST00000381158 CCNB3Q8WWL7 1395 aa14.52□□□□□ -0.08
RAB3C-202ENST00000381158 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
RAB3C-202ENST00000381158 UHRF1BP1Q6BDS2 1440 aa14.5□□□□□ -0.09
RAB3C-202ENST00000381158 SPAG9O60271 1321 aaKnown RBP14.5□□□□□ -0.09
RAB3C-202ENST00000381158 CFDP1Q9UEE9 299 aaPredicted RBP14.5□□□□□ -0.09
RAB3C-202ENST00000381158 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
RAB3C-202ENST00000381158 MBD5Q9P267 1494 aa14.49□□□□□ -0.09
RAB3C-202ENST00000381158 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
RAB3C-202ENST00000381158 A2MP01023 1474 aa14.48□□□□□ -0.09
RAB3C-202ENST00000381158 ZNF644Q9H582 1327 aaPredicted RBP14.47□□□□□ -0.09
RAB3C-202ENST00000381158 ZNF142P52746 1687 aaPredicted RBP14.46□□□□□ -0.1
RAB3C-202ENST00000381158 NCOA2Q15596 1464 aa14.44□□□□□ -0.1
RAB3C-202ENST00000381158 NPATQ14207 1427 aa14.44□□□□□ -0.1
RAB3C-202ENST00000381158 ESF1Q9H501 851 aaKnown RBP14.44□□□□□ -0.1
RAB3C-202ENST00000381158 MYO3AQ8NEV4 1616 aa14.44□□□□□ -0.1
RAB3C-202ENST00000381158 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
RAB3C-202ENST00000381158 ZMYM3Q14202 1370 aa14.43□□□□□ -0.1
RAB3C-202ENST00000381158 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
RAB3C-202ENST00000381158 RTEL1-TNFRSF6BF6WH68 1400 aa14.42□□□□□ -0.1
RAB3C-202ENST00000381158 PTPRTO14522 1441 aa14.41□□□□□ -0.1
RAB3C-202ENST00000381158 CAMSAP1Q5T5Y3 1602 aa14.41□□□□□ -0.1
RAB3C-202ENST00000381158 NCOA1Q15788 1441 aa14.41□□□□□ -0.1
RAB3C-202ENST00000381158 ARHGEF5Q12774 1597 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms