RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 PREX2Q70Z35 1606 aa31.34■■■□□ 2.61
CDPF1-202ENST00000381037 CDC42BPAQ5VT25 1732 aa31.33■■■□□ 2.61
CDPF1-202ENST00000381037 CDC42BPBQ9Y5S2 1711 aa31.33■■■□□ 2.61
CDPF1-202ENST00000381037 CFAP74Q9C0B2 1584 aa31.32■■■□□ 2.6
CDPF1-202ENST00000381037 SUPT6HQ7KZ85 1726 aaKnown RBP31.31■■■□□ 2.6
CDPF1-202ENST00000381037 CCNB3Q8WWL7 1395 aa31.31■■■□□ 2.6
CDPF1-202ENST00000381037 ARHGAP5Q13017 1502 aa31.3■■■□□ 2.6
CDPF1-202ENST00000381037 ADGRL1O94910 1474 aa31.23■■■□□ 2.59
CDPF1-202ENST00000381037 RAPGEF3O95398 923 aa31.23■■■□□ 2.59
CDPF1-202ENST00000381037 CFDP1Q9UEE9 299 aaPredicted RBP31.22■■■□□ 2.59
CDPF1-202ENST00000381037 DENND4BO75064 1496 aaPredicted RBP31.21■■■□□ 2.59
CDPF1-202ENST00000381037 SCAPERQ9BY12 1400 aa31.21■■■□□ 2.59
CDPF1-202ENST00000381037 FRMPD1Q5SYB0 1578 aa31.19■■■□□ 2.58
CDPF1-202ENST00000381037 ITSN2Q9NZM3 1697 aa31.16■■■□□ 2.58
CDPF1-202ENST00000381037 SAMD9LQ8IVG5 1584 aa31.16■■■□□ 2.58
CDPF1-202ENST00000381037 ARHGEF12Q9NZN5 1544 aa31.15■■■□□ 2.58
CDPF1-202ENST00000381037 RICTORQ6R327 1708 aa31.15■■■□□ 2.58
CDPF1-202ENST00000381037 ABCC1P33527 1531 aa31.15■■■□□ 2.58
CDPF1-202ENST00000381037 POGZQ7Z3K3 1410 aa31.14■■■□□ 2.58
CDPF1-202ENST00000381037 ZNF777Q9ULD5 760 aaPredicted RBP31.13■■■□□ 2.57
CDPF1-202ENST00000381037 ZNF644Q9H582 1327 aaPredicted RBP31.11■■■□□ 2.57
CDPF1-202ENST00000381037 MYOM3Q5VTT5 1437 aa31.11■■■□□ 2.57
CDPF1-202ENST00000381037 KIAA1107Q9UPP5 1409 aa31.11■■■□□ 2.57
CDPF1-202ENST00000381037 TRAPPC8Q9Y2L5 1435 aa31.07■■■□□ 2.56
CDPF1-202ENST00000381037 PLEKHH2Q8IVE3 1493 aa31.07■■■□□ 2.56
CDPF1-202ENST00000381037 MIA2Q96PC5 1412 aa31.06■■■□□ 2.56
CDPF1-202ENST00000381037 AFAP1Q8N556 730 aa31.06■■■□□ 2.56
CDPF1-202ENST00000381037 ZNF518AQ6AHZ1 1483 aa31.06■■■□□ 2.56
CDPF1-202ENST00000381037 ZMYM4Q5VZL5 1548 aa31.06■■■□□ 2.56
CDPF1-202ENST00000381037 SYCP2Q9BX26 1530 aa31.04■■■□□ 2.56
CDPF1-202ENST00000381037 HNRNPMP52272 730 aaKnown RBP eCLIP31.04■■■□□ 2.56
CDPF1-202ENST00000381037 MBD5Q9P267 1494 aa31.03■■■□□ 2.56
CDPF1-202ENST00000381037 KDM5CP41229 1560 aa31.03■■■□□ 2.56
CDPF1-202ENST00000381037 CAMSAP2Q08AD1 1489 aa31.01■■■□□ 2.55
CDPF1-202ENST00000381037 MAGI2Q86UL8 1455 aa31■■■□□ 2.55
CDPF1-202ENST00000381037 PPARGC1BQ86YN6 1023 aaKnown RBP30.99■■■□□ 2.55
CDPF1-202ENST00000381037 FGD6Q6ZV73 1430 aa30.96■■■□□ 2.55
CDPF1-202ENST00000381037 MLH3Q9UHC1 1453 aa30.95■■■□□ 2.54
CDPF1-202ENST00000381037 YEATS2Q9ULM3 1422 aa30.95■■■□□ 2.54
CDPF1-202ENST00000381037 ARHGEF40Q8TER5 1519 aa30.91■■■□□ 2.54
CDPF1-202ENST00000381037 ZFYVE16Q7Z3T8 1539 aa30.9■■■□□ 2.54
CDPF1-202ENST00000381037 HECW2Q9P2P5 1572 aa30.89■■■□□ 2.54
CDPF1-202ENST00000381037 TCOF1Q13428 1488 aaKnown RBP30.89■■■□□ 2.54
CDPF1-202ENST00000381037 RSPH4AQ5TD94 716 aa30.89■■■□□ 2.54
CDPF1-202ENST00000381037 ARHGEF5Q12774 1597 aa30.88■■■□□ 2.53
CDPF1-202ENST00000381037 PTPN23Q9H3S7 1636 aa30.88■■■□□ 2.53
CDPF1-202ENST00000381037 CCDC141Q6ZP82 1450 aa30.86■■■□□ 2.53
CDPF1-202ENST00000381037 SPAG9O60271 1321 aaKnown RBP30.86■■■□□ 2.53
CDPF1-202ENST00000381037 KIDINS220Q9ULH0 1771 aa30.85■■■□□ 2.53
CDPF1-202ENST00000381037 ATP10AO60312 1499 aa30.81■■■□□ 2.52
CDPF1-202ENST00000381037 INO80Q9ULG1 1556 aaPredicted RBP30.81■■■□□ 2.52
CDPF1-202ENST00000381037 DIP2CQ9Y2E4 1556 aa30.81■■■□□ 2.52
CDPF1-202ENST00000381037 RTEL1-TNFRSF6BF6WH68 1400 aa30.8■■■□□ 2.52
CDPF1-202ENST00000381037 ATP7AQ04656 1500 aa30.79■■■□□ 2.52
CDPF1-202ENST00000381037 ABCA6Q8N139 1617 aa30.79■■■□□ 2.52
CDPF1-202ENST00000381037 MYT1LQ9UL68 1186 aa30.77■■■□□ 2.52
CDPF1-202ENST00000381037 ABCC5O15440 1437 aa30.76■■■□□ 2.51
CDPF1-202ENST00000381037 C9orf84Q5VXU9 1444 aa30.75■■■□□ 2.51
CDPF1-202ENST00000381037 SIGLEC1Q9BZZ2 1709 aa30.74■■■□□ 2.51
CDPF1-202ENST00000381037 TSPY4P0CV99 314 aa30.73■■■□□ 2.51
CDPF1-202ENST00000381037 TSPY10P0CW01 314 aa30.73■■■□□ 2.51
CDPF1-202ENST00000381037 REREQ9P2R6 1566 aa30.73■■■□□ 2.51
CDPF1-202ENST00000381037 MAST1Q9Y2H9 1570 aa30.71■■■□□ 2.51
CDPF1-202ENST00000381037 DNMT1P26358 1616 aaKnown RBP30.71■■■□□ 2.51
CDPF1-202ENST00000381037 DAPK1P53355 1430 aa30.71■■■□□ 2.51
CDPF1-202ENST00000381037 FAM50AQ14320 339 aaKnown RBP30.7■■■□□ 2.51
CDPF1-202ENST00000381037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.69■■■□□ 2.5
CDPF1-202ENST00000381037 KDM4FA0A1W2PPD8 638 aa30.69■■■□□ 2.5
CDPF1-202ENST00000381037 RRBP1Q9P2E9 1410 aaKnown RBP30.69■■■□□ 2.5
CDPF1-202ENST00000381037 SHANK2Q9UPX8 1470 aa30.67■■■□□ 2.5
CDPF1-202ENST00000381037 ARID4BQ4LE39 1312 aaPredicted RBP30.65■■■□□ 2.5
CDPF1-202ENST00000381037 CROCC2H7BZ55 1655 aa30.64■■■□□ 2.5
CDPF1-202ENST00000381037 AGLP35573 1532 aa30.63■■■□□ 2.49
CDPF1-202ENST00000381037 A2MP01023 1474 aa30.63■■■□□ 2.49
CDPF1-202ENST00000381037 PLXNC1O60486 1568 aa30.63■■■□□ 2.49
CDPF1-202ENST00000381037 ADGBQ8N7X0 1667 aa30.6■■■□□ 2.49
CDPF1-202ENST00000381037 DHX29Q7Z478 1369 aaKnown RBP30.59■■■□□ 2.49
CDPF1-202ENST00000381037 BCORL1Q5H9F3 1711 aa30.59■■■□□ 2.49
CDPF1-202ENST00000381037 PTPRKQ15262 1439 aa30.59■■■□□ 2.49
CDPF1-202ENST00000381037 ADAMTSL3P82987 1691 aa30.56■■■□□ 2.48
CDPF1-202ENST00000381037 CHIC2Q9UKJ5 165 aa30.54■■■□□ 2.48
CDPF1-202ENST00000381037 NCOA1Q15788 1441 aa30.53■■■□□ 2.48
CDPF1-202ENST00000381037 ADGRL2O95490 1459 aa30.53■■■□□ 2.48
CDPF1-202ENST00000381037 MLECQ14165 292 aa30.51■■■□□ 2.47
CDPF1-202ENST00000381037 ANKRD30AQ9BXX3 1397 aa30.49■■■□□ 2.47
CDPF1-202ENST00000381037 KIF15Q9NS87 1388 aa30.49■■■□□ 2.47
CDPF1-202ENST00000381037 RRP7BPQ9NSQ0 103 aa30.48■■■□□ 2.47
CDPF1-202ENST00000381037 DUOX2Q9NRD8 1548 aa30.46■■■□□ 2.47
CDPF1-202ENST00000381037 MADDQ8WXG6 1647 aa30.45■■■□□ 2.46
CDPF1-202ENST00000381037 ITGAEP38570 1179 aa30.44■■■□□ 2.46
CDPF1-202ENST00000381037 ROCK1Q13464 1354 aa30.43■■■□□ 2.46
CDPF1-202ENST00000381037 KIF3BO15066 747 aa30.42■■■□□ 2.46
CDPF1-202ENST00000381037 ERBINQ96RT1 1412 aa30.39■■■□□ 2.46
CDPF1-202ENST00000381037 EIF2AK4Q9P2K8 1649 aaKnown RBP30.37■■■□□ 2.45
CDPF1-202ENST00000381037 GGT6Q6P531 493 aa30.37■■■□□ 2.45
CDPF1-202ENST00000381037 PTPRMP28827 1452 aa30.36■■■□□ 2.45
CDPF1-202ENST00000381037 PPP6R1Q9UPN7 881 aa30.35■■■□□ 2.45
CDPF1-202ENST00000381037 FER1L4A9Z1Z3 1794 aa30.34■■■□□ 2.45
CDPF1-202ENST00000381037 RIMS1Q86UR5 1692 aaKnown RBP30.33■■■□□ 2.45
CDPF1-202ENST00000381037 RNF17Q9BXT8 1623 aaKnown RBP30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms