RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ADAMTSL3P82987 1691 aa14.85□□□□□ -0.03
HMGN1-202ENST00000380747 ABCA9Q8IUA7 1624 aa14.84□□□□□ -0.03
HMGN1-202ENST00000380747 NEO1Q92859 1461 aa14.84□□□□□ -0.03
HMGN1-202ENST00000380747 CEP162Q5TB80 1403 aa14.83□□□□□ -0.04
HMGN1-202ENST00000380747 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
HMGN1-202ENST00000380747 PLEKHD1A6NEE1 506 aa14.81□□□□□ -0.04
HMGN1-202ENST00000380747 CDK13Q14004 1512 aaKnown RBP14.81□□□□□ -0.04
HMGN1-202ENST00000380747 PCF11O94913 1555 aaKnown RBP14.78□□□□□ -0.04
HMGN1-202ENST00000380747 CASKIN1Q8WXD9 1431 aa14.77□□□□□ -0.04
HMGN1-202ENST00000380747 RAPGEF3O95398 923 aa14.77□□□□□ -0.05
HMGN1-202ENST00000380747 BCORL1Q5H9F3 1711 aa14.77□□□□□ -0.05
HMGN1-202ENST00000380747 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
HMGN1-202ENST00000380747 FRMPD1Q5SYB0 1578 aa14.76□□□□□ -0.05
HMGN1-202ENST00000380747 LMTK3Q96Q04 1460 aa14.76□□□□□ -0.05
HMGN1-202ENST00000380747 CDK11AQ9UQ88 783 aaPredicted RBP14.75□□□□□ -0.05
HMGN1-202ENST00000380747 FYCO1Q9BQS8 1478 aa14.74□□□□□ -0.05
HMGN1-202ENST00000380747 MADDQ8WXG6 1647 aa14.74□□□□□ -0.05
HMGN1-202ENST00000380747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.051e-6■■□□□ 12.8
HMGN1-202ENST00000380747 ARHGEF40Q8TER5 1519 aa14.72□□□□□ -0.05
HMGN1-202ENST00000380747 CCDC18Q5T9S5 1454 aa14.72□□□□□ -0.05
HMGN1-202ENST00000380747 DENND4BO75064 1496 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-202ENST00000380747 ARID4BQ4LE39 1312 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-202ENST00000380747 LRRIQ1Q96JM4 1722 aa14.7□□□□□ -0.06
HMGN1-202ENST00000380747 TROQ12816 1431 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-202ENST00000380747 ZMYM4Q5VZL5 1548 aa14.67□□□□□ -0.06
HMGN1-202ENST00000380747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.67□□□□□ -0.061e-6■■■■□ 20.1
HMGN1-202ENST00000380747 POGZQ7Z3K3 1410 aa14.66□□□□□ -0.06
HMGN1-202ENST00000380747 AKNAQ7Z591 1439 aa14.66□□□□□ -0.06
HMGN1-202ENST00000380747 RICTORQ6R327 1708 aa14.66□□□□□ -0.06
HMGN1-202ENST00000380747 FANCAO15360 1455 aa14.66□□□□□ -0.06
HMGN1-202ENST00000380747 TTC37Q6PGP7 1564 aa14.65□□□□□ -0.06
HMGN1-202ENST00000380747 CFAP74Q9C0B2 1584 aa14.65□□□□□ -0.06
HMGN1-202ENST00000380747 MAGI2Q86UL8 1455 aa14.65□□□□□ -0.06
HMGN1-202ENST00000380747 KIF14Q15058 1648 aa14.64□□□□□ -0.07
HMGN1-202ENST00000380747 VPS8Q8N3P4 1428 aa14.64□□□□□ -0.07
HMGN1-202ENST00000380747 RIMS1Q86UR5 1692 aaKnown RBP14.64□□□□□ -0.07
HMGN1-202ENST00000380747 ZFYVE16Q7Z3T8 1539 aa14.61□□□□□ -0.07
HMGN1-202ENST00000380747 MTUS2Q5JR59 1369 aa14.6□□□□□ -0.07
HMGN1-202ENST00000380747 HSPA2P54652 639 aa14.6□□□□□ -0.07
HMGN1-202ENST00000380747 PLCH2O75038 1416 aa14.59□□□□□ -0.07
HMGN1-202ENST00000380747 YEATS2Q9ULM3 1422 aa14.59□□□□□ -0.07
HMGN1-202ENST00000380747 CERKQ8TCT0 537 aa14.59□□□□□ -0.07
HMGN1-202ENST00000380747 ATXN8OSP0DMR3 200 aa14.58□□□□□ -0.08
HMGN1-202ENST00000380747 EFCAB2Q5VUJ9 269 aa14.57□□□□□ -0.08
HMGN1-202ENST00000380747 SIGLEC1Q9BZZ2 1709 aa14.56□□□□□ -0.08
HMGN1-202ENST00000380747 MYO5CQ9NQX4 1742 aa14.56□□□□□ -0.08
HMGN1-202ENST00000380747 ARHGAP5Q13017 1502 aa14.56□□□□□ -0.08
HMGN1-202ENST00000380747 ARHGEF12Q9NZN5 1544 aa14.55□□□□□ -0.08
HMGN1-202ENST00000380747 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-202ENST00000380747 EHBP1L1Q8N3D4 1523 aa14.54□□□□□ -0.08
HMGN1-202ENST00000380747 TIAM1Q13009 1591 aa14.53□□□□□ -0.08
HMGN1-202ENST00000380747 ATP10AO60312 1499 aa14.53□□□□□ -0.08
HMGN1-202ENST00000380747 SCAPERQ9BY12 1400 aa14.53□□□□□ -0.08
HMGN1-202ENST00000380747 FER1L4A9Z1Z3 1794 aa14.52□□□□□ -0.08
HMGN1-202ENST00000380747 C9orf84Q5VXU9 1444 aa14.52□□□□□ -0.08
HMGN1-202ENST00000380747 APLP2Q06481 763 aa14.52□□□□□ -0.09
HMGN1-202ENST00000380747 CCNB3Q8WWL7 1395 aa14.51□□□□□ -0.09
HMGN1-202ENST00000380747 ZNF777Q9ULD5 760 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-202ENST00000380747 PREX2Q70Z35 1606 aa14.5□□□□□ -0.09
HMGN1-202ENST00000380747 PREX1Q8TCU6 1659 aa14.49□□□□□ -0.09
HMGN1-202ENST00000380747 MLECQ14165 292 aa14.49□□□□□ -0.09
HMGN1-202ENST00000380747 GPATCH8Q9UKJ3 1502 aaKnown RBP14.49□□□□□ -0.09
HMGN1-202ENST00000380747 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-202ENST00000380747 LRRC9Q6ZRR7 1453 aa14.48□□□□□ -0.09
HMGN1-202ENST00000380747 MAP3K1Q13233 1512 aa14.47□□□□□ -0.09
HMGN1-202ENST00000380747 CDC42BPAQ5VT25 1732 aa14.47□□□□□ -0.09
HMGN1-202ENST00000380747 CDC42BPBQ9Y5S2 1711 aa14.47□□□□□ -0.09
HMGN1-202ENST00000380747 ZNF518AQ6AHZ1 1483 aa14.47□□□□□ -0.09
HMGN1-202ENST00000380747 KANK4Q5T7N3 995 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-202ENST00000380747 NCOA2Q15596 1464 aa14.46□□□□□ -0.09
HMGN1-202ENST00000380747 SUPT6HQ7KZ85 1726 aaKnown RBP14.46□□□□□ -0.1
HMGN1-202ENST00000380747 KDM5CP41229 1560 aa14.45□□□□□ -0.1
HMGN1-202ENST00000380747 REREQ9P2R6 1566 aa14.44□□□□□ -0.1
HMGN1-202ENST00000380747 UHRF1BP1Q6BDS2 1440 aa14.44□□□□□ -0.1
HMGN1-202ENST00000380747 MYT1LQ9UL68 1186 aa14.44□□□□□ -0.1
HMGN1-202ENST00000380747 SETD1BQ9UPS6 1966 aaKnown RBP14.43□□□□□ -0.1
HMGN1-202ENST00000380747 ABCC1P33527 1531 aa14.43□□□□□ -0.1
HMGN1-202ENST00000380747 AFAP1Q8N556 730 aa14.43□□□□□ -0.1
HMGN1-202ENST00000380747 STRCQ7RTU9 1775 aa14.42□□□□□ -0.1
HMGN1-202ENST00000380747 PTPRTO14522 1441 aa14.42□□□□□ -0.1
HMGN1-202ENST00000380747 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
HMGN1-202ENST00000380747 SAMD9LQ8IVG5 1584 aa14.42□□□□□ -0.1
HMGN1-202ENST00000380747 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
HMGN1-202ENST00000380747 SOCS7O14512 581 aa14.41□□□□□ -0.1
HMGN1-202ENST00000380747 CEBPAP49715 358 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-202ENST00000380747 HNRNPMP52272 730 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGN1-202ENST00000380747 TRAPPC8Q9Y2L5 1435 aa14.41□□□□□ -0.1
HMGN1-202ENST00000380747 MLH3Q9UHC1 1453 aa14.4□□□□□ -0.1
HMGN1-202ENST00000380747 DISP3Q9P2K9 1392 aa14.4□□□□□ -0.1
HMGN1-202ENST00000380747 ILDR2Q71H61 639 aa14.4□□□□□ -0.1
HMGN1-202ENST00000380747 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.1
HMGN1-202ENST00000380747 ZNF644Q9H582 1327 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-202ENST00000380747 PLEKHH2Q8IVE3 1493 aa14.39□□□□□ -0.11
HMGN1-202ENST00000380747 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-202ENST00000380747 AGLP35573 1532 aa14.39□□□□□ -0.11
HMGN1-202ENST00000380747 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
HMGN1-202ENST00000380747 IQSEC2Q5JU85 1478 aa14.38□□□□□ -0.11
HMGN1-202ENST00000380747 KIAA1107Q9UPP5 1409 aa14.37□□□□□ -0.11
HMGN1-202ENST00000380747 SPAG9O60271 1321 aaKnown RBP14.35□□□□□ -0.11
HMGN1-202ENST00000380747 LTBP4Q8N2S1 1624 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms