RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 ARHGAP5Q13017 1502 aa38.48■■■■□ 3.75
CDKN2A-203ENST00000380151 ZFYVE16Q7Z3T8 1539 aa38.44■■■■□ 3.74
CDKN2A-203ENST00000380151 ARID4BQ4LE39 1312 aaPredicted RBP38.42■■■■□ 3.74
CDKN2A-203ENST00000380151 CEP162Q5TB80 1403 aa38.42■■■■□ 3.74
CDKN2A-203ENST00000380151 YEATS2Q9ULM3 1422 aa38.42■■■■□ 3.74
CDKN2A-203ENST00000380151 ADAMTSL3P82987 1691 aa38.4■■■■□ 3.74
CDKN2A-203ENST00000380151 MAGI2Q86UL8 1455 aa38.39■■■■□ 3.74
CDKN2A-203ENST00000380151 BCORL1Q5H9F3 1711 aa38.38■■■■□ 3.74
CDKN2A-203ENST00000380151 PREX2Q70Z35 1606 aa38.38■■■■□ 3.73
CDKN2A-203ENST00000380151 CDC42BPBQ9Y5S2 1711 aa38.37■■■■□ 3.73
CDKN2A-203ENST00000380151 ZNF518AQ6AHZ1 1483 aa38.3■■■■□ 3.72
CDKN2A-203ENST00000380151 MADDQ8WXG6 1647 aa38.3■■■■□ 3.72
CDKN2A-203ENST00000380151 SIGLEC1Q9BZZ2 1709 aa38.29■■■■□ 3.72
CDKN2A-203ENST00000380151 HECW2Q9P2P5 1572 aa38.28■■■■□ 3.72
CDKN2A-203ENST00000380151 PTPRMP28827 1452 aa38.28■■■■□ 3.72
CDKN2A-203ENST00000380151 CDC42BPAQ5VT25 1732 aa38.27■■■■□ 3.72
CDKN2A-203ENST00000380151 ABCC1P33527 1531 aa38.25■■■■□ 3.71
CDKN2A-203ENST00000380151 KDM5CP41229 1560 aa38.25■■■■□ 3.71
CDKN2A-203ENST00000380151 AFAP1Q8N556 730 aa38.23■■■■□ 3.71
CDKN2A-203ENST00000380151 LOC105371045A0A1W2PR82 267 aa38.2■■■■□ 3.71
CDKN2A-203ENST00000380151 MTUS2Q5JR59 1369 aa38.19■■■■□ 3.7
CDKN2A-203ENST00000380151 ARHGEF12Q9NZN5 1544 aa38.19■■■■□ 3.7
CDKN2A-203ENST00000380151 ATP10AO60312 1499 aa38.19■■■■□ 3.7
CDKN2A-203ENST00000380151 C9orf84Q5VXU9 1444 aa38.18■■■■□ 3.7
CDKN2A-203ENST00000380151 ITSN2Q9NZM3 1697 aa38.17■■■■□ 3.7
CDKN2A-203ENST00000380151 GPATCH8Q9UKJ3 1502 aaKnown RBP38.17■■■■□ 3.7
CDKN2A-203ENST00000380151 TRAPPC8Q9Y2L5 1435 aa38.16■■■■□ 3.7
CDKN2A-203ENST00000380151 RIMS1Q86UR5 1692 aaKnown RBP38.16■■■■□ 3.7
CDKN2A-203ENST00000380151 MLECQ14165 292 aa38.11■■■■□ 3.69
CDKN2A-203ENST00000380151 MYT1LQ9UL68 1186 aa38.11■■■■□ 3.69
CDKN2A-203ENST00000380151 EHBP1L1Q8N3D4 1523 aa38.11■■■■□ 3.69
CDKN2A-203ENST00000380151 SAMD9LQ8IVG5 1584 aa38.1■■■■□ 3.69
CDKN2A-203ENST00000380151 ZNF777Q9ULD5 760 aaPredicted RBP38.1■■■■□ 3.69
CDKN2A-203ENST00000380151 DIP2CQ9Y2E4 1556 aa38.1■■■■□ 3.69
CDKN2A-203ENST00000380151 CCNB3Q8WWL7 1395 aa38.09■■■■□ 3.69
CDKN2A-203ENST00000380151 MLH3Q9UHC1 1453 aa38.08■■■■□ 3.69
CDKN2A-203ENST00000380151 ABCA6Q8N139 1617 aa38.06■■■■□ 3.68
CDKN2A-203ENST00000380151 SYCP2Q9BX26 1530 aa38.06■■■■□ 3.68
CDKN2A-203ENST00000380151 FER1L4A9Z1Z3 1794 aa38.02■■■■□ 3.68
CDKN2A-203ENST00000380151 TIAM1Q13009 1591 aa38.02■■■■□ 3.68
CDKN2A-203ENST00000380151 CFDP1Q9UEE9 299 aaPredicted RBP38.01■■■■□ 3.68
CDKN2A-203ENST00000380151 REREQ9P2R6 1566 aa37.98■■■■□ 3.67
CDKN2A-203ENST00000380151 VPS8Q8N3P4 1428 aa37.98■■■■□ 3.67
CDKN2A-203ENST00000380151 PLPPR3Q6T4P5 718 aa37.97■■■■□ 3.67
CDKN2A-203ENST00000380151 KIDINS220Q9ULH0 1771 aa37.96■■■■□ 3.67
CDKN2A-203ENST00000380151 PLEKHH2Q8IVE3 1493 aa37.95■■■■□ 3.67
CDKN2A-203ENST00000380151 HNRNPMP52272 730 aaKnown RBP eCLIP37.94■■■■□ 3.66
CDKN2A-203ENST00000380151 KIAA1107Q9UPP5 1409 aa37.93■■■■□ 3.66
CDKN2A-203ENST00000380151 LMTK3Q96Q04 1460 aa37.87■■■■□ 3.65
CDKN2A-203ENST00000380151 SUPT6HQ7KZ85 1726 aaKnown RBP37.87■■■■□ 3.65
CDKN2A-203ENST00000380151 SPAG9O60271 1321 aaKnown RBP37.87■■■■□ 3.65
CDKN2A-203ENST00000380151 NCOA2Q15596 1464 aa37.86■■■■□ 3.65
CDKN2A-203ENST00000380151 AGLP35573 1532 aa37.86■■■■□ 3.65
CDKN2A-203ENST00000380151 ZNF644Q9H582 1327 aaPredicted RBP37.85■■■■□ 3.65
CDKN2A-203ENST00000380151 ATP7AQ04656 1500 aa37.82■■■■□ 3.65
CDKN2A-203ENST00000380151 INO80Q9ULG1 1556 aaPredicted RBP37.81■■■■□ 3.64
CDKN2A-203ENST00000380151 LRRC9Q6ZRR7 1453 aa37.77■■■■□ 3.64
CDKN2A-203ENST00000380151 MBD5Q9P267 1494 aa37.75■■■■□ 3.63
CDKN2A-203ENST00000380151 CEBPAP49715 358 aaPredicted RBP37.73■■■■□ 3.63
CDKN2A-203ENST00000380151 CAMSAP2Q08AD1 1489 aa37.7■■■■□ 3.63
CDKN2A-203ENST00000380151 MAP3K1Q13233 1512 aa37.69■■■■□ 3.62
CDKN2A-203ENST00000380151 PLXNC1O60486 1568 aa37.68■■■■□ 3.62
CDKN2A-203ENST00000380151 HSPA2P54652 639 aa37.67■■■■□ 3.62
CDKN2A-203ENST00000380151 A2MP01023 1474 aa37.66■■■■□ 3.62
CDKN2A-203ENST00000380151 KANK4Q5T7N3 995 aaPredicted RBP37.64■■■■□ 3.62
CDKN2A-203ENST00000380151 ESF1Q9H501 851 aaKnown RBP37.64■■■■□ 3.62
CDKN2A-203ENST00000380151 CCDC141Q6ZP82 1450 aa37.62■■■■□ 3.61
CDKN2A-203ENST00000380151 C3P01024 1663 aa37.61■■■■□ 3.61
CDKN2A-203ENST00000380151 PREX1Q8TCU6 1659 aa37.61■■■■□ 3.61
CDKN2A-203ENST00000380151 ADGBQ8N7X0 1667 aa37.6■■■■□ 3.61
CDKN2A-203ENST00000380151 RTEL1-TNFRSF6BF6WH68 1400 aa37.58■■■■□ 3.61
CDKN2A-203ENST00000380151 CNTLNQ9NXG0 1405 aa37.58■■■■□ 3.61
CDKN2A-203ENST00000380151 ARHGEF5Q12774 1597 aa37.51■■■■□ 3.6
CDKN2A-203ENST00000380151 UHRF1BP1Q6BDS2 1440 aa37.51■■■■□ 3.59
CDKN2A-203ENST00000380151 MROH2AA6NES4 1674 aa37.48■■■■□ 3.59
CDKN2A-203ENST00000380151 MYOM3Q5VTT5 1437 aa37.48■■■■□ 3.59
CDKN2A-203ENST00000380151 RSPH4AQ5TD94 716 aa37.47■■■■□ 3.59
CDKN2A-203ENST00000380151 GGT6Q6P531 493 aa37.46■■■■□ 3.59
CDKN2A-203ENST00000380151 APLP2Q06481 763 aa37.45■■■■□ 3.59
CDKN2A-203ENST00000380151 ILDR1Q86SU0 546 aaPredicted RBP37.45■■■■□ 3.59
CDKN2A-203ENST00000380151 DHX29Q7Z478 1369 aaKnown RBP37.44■■■■□ 3.58
CDKN2A-203ENST00000380151 CLTCQ00610 1675 aaKnown RBP37.44■■■■□ 3.58
CDKN2A-203ENST00000380151 SETD1BQ9UPS6 1966 aaKnown RBP37.43■■■■□ 3.58
CDKN2A-203ENST00000380151 MIA2Q96PC5 1412 aa37.42■■■■□ 3.58
CDKN2A-203ENST00000380151 ZMYM3Q14202 1370 aa37.42■■■■□ 3.58
CDKN2A-203ENST00000380151 TSPY4P0CV99 314 aa37.37■■■■□ 3.57
CDKN2A-203ENST00000380151 TSPY10P0CW01 314 aa37.37■■■■□ 3.57
CDKN2A-203ENST00000380151 NPATQ14207 1427 aa37.36■■■■□ 3.57
CDKN2A-203ENST00000380151 MAST1Q9Y2H9 1570 aa37.33■■■■□ 3.57
CDKN2A-203ENST00000380151 KIF3BO15066 747 aa37.32■■■■□ 3.56
CDKN2A-203ENST00000380151 PPP6R1Q9UPN7 881 aa37.3■■■■□ 3.56
CDKN2A-203ENST00000380151 PTPRKQ15262 1439 aa37.27■■■■□ 3.56
CDKN2A-203ENST00000380151 STRCQ7RTU9 1775 aa37.26■■■■□ 3.56
CDKN2A-203ENST00000380151 PTPN23Q9H3S7 1636 aa37.25■■■■□ 3.55
CDKN2A-203ENST00000380151 KDM5DQ9BY66 1539 aa37.22■■■■□ 3.55
CDKN2A-203ENST00000380151 MYO3AQ8NEV4 1616 aa37.21■■■■□ 3.55
CDKN2A-203ENST00000380151 FGD6Q6ZV73 1430 aa37.2■■■■□ 3.55
CDKN2A-203ENST00000380151 FAM135AQ9P2D6 1515 aa37.19■■■■□ 3.54
CDKN2A-203ENST00000380151 CROCC2H7BZ55 1655 aa37.16■■■■□ 3.54
CDKN2A-203ENST00000380151 ABCC5O15440 1437 aa37.15■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms