RNA–Protein interactions for RNA: ENST00000379384.9

TM6SF1-203, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 5

Gene TM6SF1, Length 1,808 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-203ENST00000379384 KANK4Q5T7N3 995 aaPredicted RBP28.27■■■□□ 2.12
TM6SF1-203ENST00000379384 PHLDB1Q86UU1 1377 aa28.23■■■□□ 2.11
TM6SF1-203ENST00000379384 AKNAQ7Z591 1439 aa28.22■■■□□ 2.11
TM6SF1-203ENST00000379384 NCOA2Q15596 1464 aa28.21■■■□□ 2.11
TM6SF1-203ENST00000379384 GPATCH8Q9UKJ3 1502 aaKnown RBP28.21■■■□□ 2.11
TM6SF1-203ENST00000379384 CCNB3Q8WWL7 1395 aa28.21■■■□□ 2.11
TM6SF1-203ENST00000379384 EFCAB2Q5VUJ9 269 aa28.2■■■□□ 2.11
TM6SF1-203ENST00000379384 ITSN2Q9NZM3 1697 aa28.2■■■□□ 2.1
TM6SF1-203ENST00000379384 ADGRL1O94910 1474 aa28.17■■■□□ 2.1
TM6SF1-203ENST00000379384 RICTORQ6R327 1708 aa28.14■■■□□ 2.09
TM6SF1-203ENST00000379384 RAPGEF3O95398 923 aa28.12■■■□□ 2.09
TM6SF1-203ENST00000379384 CFDP1Q9UEE9 299 aaPredicted RBP28.11■■■□□ 2.09
TM6SF1-203ENST00000379384 FRMPD1Q5SYB0 1578 aa28.11■■■□□ 2.09
TM6SF1-203ENST00000379384 ZNF777Q9ULD5 760 aaPredicted RBP28.11■■■□□ 2.09
TM6SF1-203ENST00000379384 DENND4BO75064 1496 aaPredicted RBP28.11■■■□□ 2.09
TM6SF1-203ENST00000379384 SCAPERQ9BY12 1400 aa28.1■■■□□ 2.09
TM6SF1-203ENST00000379384 SAMD9LQ8IVG5 1584 aa28.1■■■□□ 2.09
TM6SF1-203ENST00000379384 ABCC1P33527 1531 aa28.08■■■□□ 2.09
TM6SF1-203ENST00000379384 POGZQ7Z3K3 1410 aa28.04■■■□□ 2.08
TM6SF1-203ENST00000379384 ARHGEF12Q9NZN5 1544 aa28.02■■■□□ 2.08
TM6SF1-203ENST00000379384 SYCP2Q9BX26 1530 aa28.01■■■□□ 2.08
TM6SF1-203ENST00000379384 MYOM3Q5VTT5 1437 aa28■■■□□ 2.07
TM6SF1-203ENST00000379384 ZNF644Q9H582 1327 aaPredicted RBP27.99■■■□□ 2.07
TM6SF1-203ENST00000379384 ZNF518AQ6AHZ1 1483 aa27.98■■■□□ 2.07
TM6SF1-203ENST00000379384 PPARGC1BQ86YN6 1023 aaKnown RBP27.98■■■□□ 2.07
TM6SF1-203ENST00000379384 PLEKHH2Q8IVE3 1493 aa27.97■■■□□ 2.07
TM6SF1-203ENST00000379384 ZMYM4Q5VZL5 1548 aa27.97■■■□□ 2.07
TM6SF1-203ENST00000379384 CAMSAP2Q08AD1 1489 aa27.95■■■□□ 2.07
TM6SF1-203ENST00000379384 TRAPPC8Q9Y2L5 1435 aa27.95■■■□□ 2.07
TM6SF1-203ENST00000379384 AFAP1Q8N556 730 aa27.95■■■□□ 2.07
TM6SF1-203ENST00000379384 HNRNPMP52272 730 aaKnown RBP eCLIP27.95■■■□□ 2.06
TM6SF1-203ENST00000379384 KDM5CP41229 1560 aa27.94■■■□□ 2.06
TM6SF1-203ENST00000379384 KIAA1107Q9UPP5 1409 aa27.94■■■□□ 2.06
TM6SF1-203ENST00000379384 MIA2Q96PC5 1412 aa27.92■■■□□ 2.06
TM6SF1-203ENST00000379384 HECW2Q9P2P5 1572 aa27.9■■■□□ 2.06
TM6SF1-203ENST00000379384 ARHGEF40Q8TER5 1519 aa27.89■■■□□ 2.06
TM6SF1-203ENST00000379384 ZFYVE16Q7Z3T8 1539 aa27.89■■■□□ 2.05
TM6SF1-203ENST00000379384 MAGI2Q86UL8 1455 aa27.88■■■□□ 2.05
TM6SF1-203ENST00000379384 PTPN23Q9H3S7 1636 aa27.88■■■□□ 2.05
TM6SF1-203ENST00000379384 MBD5Q9P267 1494 aa27.87■■■□□ 2.05
TM6SF1-203ENST00000379384 FGD6Q6ZV73 1430 aa27.86■■■□□ 2.05
TM6SF1-203ENST00000379384 YEATS2Q9ULM3 1422 aa27.86■■■□□ 2.05
TM6SF1-203ENST00000379384 MYT1LQ9UL68 1186 aa27.85■■■□□ 2.05
TM6SF1-203ENST00000379384 KIDINS220Q9ULH0 1771 aa27.84■■■□□ 2.05
TM6SF1-203ENST00000379384 MLH3Q9UHC1 1453 aa27.83■■■□□ 2.05
TM6SF1-203ENST00000379384 ARHGEF5Q12774 1597 aa27.81■■■□□ 2.04
TM6SF1-203ENST00000379384 CCDC141Q6ZP82 1450 aa27.8■■■□□ 2.04
TM6SF1-203ENST00000379384 ABCA6Q8N139 1617 aa27.8■■■□□ 2.04
TM6SF1-203ENST00000379384 SPAG9O60271 1321 aaKnown RBP27.79■■■□□ 2.04
TM6SF1-203ENST00000379384 INO80Q9ULG1 1556 aaPredicted RBP27.79■■■□□ 2.04
TM6SF1-203ENST00000379384 DIP2CQ9Y2E4 1556 aa27.77■■■□□ 2.04
TM6SF1-203ENST00000379384 ATP7AQ04656 1500 aa27.77■■■□□ 2.04
TM6SF1-203ENST00000379384 TCOF1Q13428 1488 aaKnown RBP27.77■■■□□ 2.04
TM6SF1-203ENST00000379384 RSPH4AQ5TD94 716 aa27.76■■■□□ 2.03
TM6SF1-203ENST00000379384 SIGLEC1Q9BZZ2 1709 aa27.76■■■□□ 2.03
TM6SF1-203ENST00000379384 ATP10AO60312 1499 aa27.74■■■□□ 2.03
TM6SF1-203ENST00000379384 CROCC2H7BZ55 1655 aa27.71■■■□□ 2.03
TM6SF1-203ENST00000379384 C9orf84Q5VXU9 1444 aa27.71■■■□□ 2.03
TM6SF1-203ENST00000379384 FAM50AQ14320 339 aaKnown RBP27.7■■■□□ 2.02
TM6SF1-203ENST00000379384 DNMT1P26358 1616 aaKnown RBP27.7■■■□□ 2.02
TM6SF1-203ENST00000379384 ARID4BQ4LE39 1312 aaPredicted RBP27.69■■■□□ 2.02
TM6SF1-203ENST00000379384 TSPY4P0CV99 314 aa27.69■■■□□ 2.02
TM6SF1-203ENST00000379384 TSPY10P0CW01 314 aa27.69■■■□□ 2.02
TM6SF1-203ENST00000379384 RTEL1-TNFRSF6BF6WH68 1400 aa27.67■■■□□ 2.02
TM6SF1-203ENST00000379384 ADGBQ8N7X0 1667 aa27.67■■■□□ 2.02
TM6SF1-203ENST00000379384 REREQ9P2R6 1566 aa27.66■■■□□ 2.02
TM6SF1-203ENST00000379384 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
TM6SF1-203ENST00000379384 ABCC5O15440 1437 aa27.65■■■□□ 2.02
TM6SF1-203ENST00000379384 DAPK1P53355 1430 aa27.65■■■□□ 2.02
TM6SF1-203ENST00000379384 BCORL1Q5H9F3 1711 aa27.63■■■□□ 2.01
TM6SF1-203ENST00000379384 SHANK2Q9UPX8 1470 aa27.6■■■□□ 2.01
TM6SF1-203ENST00000379384 KDM4FA0A1W2PPD8 638 aa27.6■■■□□ 2.01
TM6SF1-203ENST00000379384 A2MP01023 1474 aa27.59■■■□□ 2.01
TM6SF1-203ENST00000379384 PLXNC1O60486 1568 aa27.58■■■□□ 2.01
TM6SF1-203ENST00000379384 RRBP1Q9P2E9 1410 aaKnown RBP27.57■■■□□ 2
TM6SF1-203ENST00000379384 ADAMTSL3P82987 1691 aa27.56■■■□□ 2
TM6SF1-203ENST00000379384 MLECQ14165 292 aa27.55■■■□□ 2
TM6SF1-203ENST00000379384 AGLP35573 1532 aa27.55■■■□□ 2
TM6SF1-203ENST00000379384 CHIC2Q9UKJ5 165 aa27.53■■■□□ 2
TM6SF1-203ENST00000379384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.53■■■□□ 2
TM6SF1-203ENST00000379384 MADDQ8WXG6 1647 aa27.52■■■□□ 2
TM6SF1-203ENST00000379384 FER1L4A9Z1Z3 1794 aa27.51■■□□□ 1.99
TM6SF1-203ENST00000379384 DHX29Q7Z478 1369 aaKnown RBP27.5■■□□□ 1.99
TM6SF1-203ENST00000379384 ITGAEP38570 1179 aa27.49■■□□□ 1.99
TM6SF1-203ENST00000379384 PTPRKQ15262 1439 aa27.48■■□□□ 1.99
TM6SF1-203ENST00000379384 RRP7BPQ9NSQ0 103 aa27.46■■□□□ 1.99
TM6SF1-203ENST00000379384 RIMS1Q86UR5 1692 aaKnown RBP27.46■■□□□ 1.99
TM6SF1-203ENST00000379384 ANKRD30AQ9BXX3 1397 aa27.46■■□□□ 1.99
TM6SF1-203ENST00000379384 KIF15Q9NS87 1388 aa27.46■■□□□ 1.99
TM6SF1-203ENST00000379384 DUOX2Q9NRD8 1548 aa27.45■■□□□ 1.98
TM6SF1-203ENST00000379384 NCOA1Q15788 1441 aa27.44■■□□□ 1.98
TM6SF1-203ENST00000379384 ADGRL2O95490 1459 aa27.44■■□□□ 1.98
TM6SF1-203ENST00000379384 EIF2AK4Q9P2K8 1649 aaKnown RBP27.41■■□□□ 1.98
TM6SF1-203ENST00000379384 KIF3BO15066 747 aa27.41■■□□□ 1.98
TM6SF1-203ENST00000379384 GGT6Q6P531 493 aa27.39■■□□□ 1.98
TM6SF1-203ENST00000379384 AEBP2Q6ZN18 517 aaPredicted RBP27.39■■□□□ 1.97
TM6SF1-203ENST00000379384 ERBINQ96RT1 1412 aa27.36■■□□□ 1.97
TM6SF1-203ENST00000379384 PTPRMP28827 1452 aa27.36■■□□□ 1.97
TM6SF1-203ENST00000379384 ROCK1Q13464 1354 aa27.34■■□□□ 1.97
TM6SF1-203ENST00000379384 CLTCQ00610 1675 aaKnown RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms