RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 FYCO1Q9BQS8 1478 aa30.76■■■□□ 2.51
TMEM88B-201ENST00000378821 SCAPERQ9BY12 1400 aa30.75■■■□□ 2.51
TMEM88B-201ENST00000378821 POGZQ7Z3K3 1410 aa30.74■■■□□ 2.51
TMEM88B-201ENST00000378821 ZFYVE16Q7Z3T8 1539 aa30.7■■■□□ 2.51
TMEM88B-201ENST00000378821 HECW2Q9P2P5 1572 aa30.69■■■□□ 2.5
TMEM88B-201ENST00000378821 YEATS2Q9ULM3 1422 aa30.68■■■□□ 2.5
TMEM88B-201ENST00000378821 PTPRMP28827 1452 aa30.68■■■□□ 2.5
TMEM88B-201ENST00000378821 CDC42BPBQ9Y5S2 1711 aa30.67■■■□□ 2.5
TMEM88B-201ENST00000378821 ARHGAP5Q13017 1502 aa30.65■■■□□ 2.5
TMEM88B-201ENST00000378821 SIGLEC1Q9BZZ2 1709 aa30.64■■■□□ 2.5
TMEM88B-201ENST00000378821 ARID4BQ4LE39 1312 aaPredicted RBP30.63■■■□□ 2.49
TMEM88B-201ENST00000378821 PREX2Q70Z35 1606 aa30.62■■■□□ 2.49
TMEM88B-201ENST00000378821 MADDQ8WXG6 1647 aa30.62■■■□□ 2.49
TMEM88B-201ENST00000378821 KDM5CP41229 1560 aa30.6■■■□□ 2.49
TMEM88B-201ENST00000378821 ZNF518AQ6AHZ1 1483 aa30.6■■■□□ 2.49
TMEM88B-201ENST00000378821 ATP10AO60312 1499 aa30.57■■■□□ 2.48
TMEM88B-201ENST00000378821 CDC42BPAQ5VT25 1732 aa30.56■■■□□ 2.48
TMEM88B-201ENST00000378821 AFAP1Q8N556 730 aa30.52■■■□□ 2.48
TMEM88B-201ENST00000378821 ABCC1P33527 1531 aa30.52■■■□□ 2.48
TMEM88B-201ENST00000378821 C9orf84Q5VXU9 1444 aa30.51■■■□□ 2.47
TMEM88B-201ENST00000378821 ARHGEF12Q9NZN5 1544 aa30.5■■■□□ 2.47
TMEM88B-201ENST00000378821 RIMS1Q86UR5 1692 aaKnown RBP30.49■■■□□ 2.47
TMEM88B-201ENST00000378821 MLH3Q9UHC1 1453 aa30.49■■■□□ 2.47
TMEM88B-201ENST00000378821 CEP162Q5TB80 1403 aa30.48■■■□□ 2.47
TMEM88B-201ENST00000378821 ITSN2Q9NZM3 1697 aa30.47■■■□□ 2.47
TMEM88B-201ENST00000378821 GPATCH8Q9UKJ3 1502 aaKnown RBP30.47■■■□□ 2.47
TMEM88B-201ENST00000378821 TRAPPC8Q9Y2L5 1435 aa30.45■■■□□ 2.46
TMEM88B-201ENST00000378821 REREQ9P2R6 1566 aa30.45■■■□□ 2.46
TMEM88B-201ENST00000378821 DIP2CQ9Y2E4 1556 aa30.43■■■□□ 2.46
TMEM88B-201ENST00000378821 FER1L4A9Z1Z3 1794 aa30.4■■■□□ 2.46
TMEM88B-201ENST00000378821 SAMD9LQ8IVG5 1584 aa30.4■■■□□ 2.46
TMEM88B-201ENST00000378821 ABCA6Q8N139 1617 aa30.38■■■□□ 2.45
TMEM88B-201ENST00000378821 MTUS2Q5JR59 1369 aa30.36■■■□□ 2.45
TMEM88B-201ENST00000378821 LMTK3Q96Q04 1460 aa30.36■■■□□ 2.45
TMEM88B-201ENST00000378821 KIDINS220Q9ULH0 1771 aa30.36■■■□□ 2.45
TMEM88B-201ENST00000378821 KIAA1107Q9UPP5 1409 aa30.35■■■□□ 2.45
TMEM88B-201ENST00000378821 MLECQ14165 292 aa30.34■■■□□ 2.45
TMEM88B-201ENST00000378821 AGLP35573 1532 aa30.33■■■□□ 2.45
TMEM88B-201ENST00000378821 CCNB3Q8WWL7 1395 aa30.32■■■□□ 2.44
TMEM88B-201ENST00000378821 EHBP1L1Q8N3D4 1523 aa30.32■■■□□ 2.44
TMEM88B-201ENST00000378821 SYCP2Q9BX26 1530 aa30.3■■■□□ 2.44
TMEM88B-201ENST00000378821 PLEKHH2Q8IVE3 1493 aa30.3■■■□□ 2.44
TMEM88B-201ENST00000378821 CFDP1Q9UEE9 299 aaPredicted RBP30.29■■■□□ 2.44
TMEM88B-201ENST00000378821 ZNF777Q9ULD5 760 aaPredicted RBP30.28■■■□□ 2.44
TMEM88B-201ENST00000378821 MYT1LQ9UL68 1186 aa30.27■■■□□ 2.44
TMEM88B-201ENST00000378821 TIAM1Q13009 1591 aa30.27■■■□□ 2.44
TMEM88B-201ENST00000378821 LOC105371045A0A1W2PR82 267 aa30.26■■■□□ 2.43
TMEM88B-201ENST00000378821 HNRNPMP52272 730 aaKnown RBP eCLIP30.25■■■□□ 2.43
TMEM88B-201ENST00000378821 SPAG9O60271 1321 aaKnown RBP30.2■■■□□ 2.42
TMEM88B-201ENST00000378821 INO80Q9ULG1 1556 aaPredicted RBP30.2■■■□□ 2.42
TMEM88B-201ENST00000378821 VPS8Q8N3P4 1428 aa30.19■■■□□ 2.42
TMEM88B-201ENST00000378821 ATP7AQ04656 1500 aa30.17■■■□□ 2.42
TMEM88B-201ENST00000378821 MBD5Q9P267 1494 aa30.17■■■□□ 2.42
TMEM88B-201ENST00000378821 SUPT6HQ7KZ85 1726 aaKnown RBP30.15■■■□□ 2.42
TMEM88B-201ENST00000378821 PLPPR3Q6T4P5 718 aa30.14■■■□□ 2.42
TMEM88B-201ENST00000378821 ZNF644Q9H582 1327 aaPredicted RBP30.14■■■□□ 2.42
TMEM88B-201ENST00000378821 NCOA2Q15596 1464 aa30.13■■■□□ 2.41
TMEM88B-201ENST00000378821 CEBPAP49715 358 aaPredicted RBP30.13■■■□□ 2.41
TMEM88B-201ENST00000378821 ILDR1Q86SU0 546 aaPredicted RBP30.13■■■□□ 2.41
TMEM88B-201ENST00000378821 PREX1Q8TCU6 1659 aa30.13■■■□□ 2.41
TMEM88B-201ENST00000378821 PLXNC1O60486 1568 aa30.12■■■□□ 2.41
TMEM88B-201ENST00000378821 SETD1BQ9UPS6 1966 aaKnown RBP30.12■■■□□ 2.41
TMEM88B-201ENST00000378821 C3P01024 1663 aa30.11■■■□□ 2.41
TMEM88B-201ENST00000378821 MAP3K1Q13233 1512 aa30.1■■■□□ 2.41
TMEM88B-201ENST00000378821 HSPA2P54652 639 aa30.09■■■□□ 2.41
TMEM88B-201ENST00000378821 CNTLNQ9NXG0 1405 aa30.08■■■□□ 2.41
TMEM88B-201ENST00000378821 A2MP01023 1474 aa30.07■■■□□ 2.4
TMEM88B-201ENST00000378821 RTEL1-TNFRSF6BF6WH68 1400 aa30.07■■■□□ 2.4
TMEM88B-201ENST00000378821 LRRC9Q6ZRR7 1453 aa30.06■■■□□ 2.4
TMEM88B-201ENST00000378821 ADGBQ8N7X0 1667 aa30.05■■■□□ 2.4
TMEM88B-201ENST00000378821 MROH2AA6NES4 1674 aa30.04■■■□□ 2.4
TMEM88B-201ENST00000378821 RSPH4AQ5TD94 716 aa30.01■■■□□ 2.39
TMEM88B-201ENST00000378821 ESF1Q9H501 851 aaKnown RBP30.01■■■□□ 2.39
TMEM88B-201ENST00000378821 CAMSAP2Q08AD1 1489 aa30■■■□□ 2.39
TMEM88B-201ENST00000378821 UHRF1BP1Q6BDS2 1440 aa29.98■■■□□ 2.39
TMEM88B-201ENST00000378821 CCDC141Q6ZP82 1450 aa29.97■■■□□ 2.39
TMEM88B-201ENST00000378821 ARHGEF5Q12774 1597 aa29.96■■■□□ 2.39
TMEM88B-201ENST00000378821 PPP6R1Q9UPN7 881 aa29.95■■■□□ 2.39
TMEM88B-201ENST00000378821 ZMYM3Q14202 1370 aa29.94■■■□□ 2.38
TMEM88B-201ENST00000378821 KANK4Q5T7N3 995 aaPredicted RBP29.94■■■□□ 2.38
TMEM88B-201ENST00000378821 NPATQ14207 1427 aa29.94■■■□□ 2.38
TMEM88B-201ENST00000378821 DHX29Q7Z478 1369 aaKnown RBP29.93■■■□□ 2.38
TMEM88B-201ENST00000378821 STRCQ7RTU9 1775 aa29.92■■■□□ 2.38
TMEM88B-201ENST00000378821 CLTCQ00610 1675 aaKnown RBP29.9■■■□□ 2.38
TMEM88B-201ENST00000378821 MIA2Q96PC5 1412 aa29.87■■■□□ 2.37
TMEM88B-201ENST00000378821 FBXO41Q8TF61 875 aa29.86■■■□□ 2.37
TMEM88B-201ENST00000378821 GGT6Q6P531 493 aa29.85■■■□□ 2.37
TMEM88B-201ENST00000378821 MYOM3Q5VTT5 1437 aa29.84■■■□□ 2.37
TMEM88B-201ENST00000378821 PTPRKQ15262 1439 aa29.82■■■□□ 2.36
TMEM88B-201ENST00000378821 MAST1Q9Y2H9 1570 aa29.81■■■□□ 2.36
TMEM88B-201ENST00000378821 DMRT2Q9Y5R5 561 aa29.81■■■□□ 2.36
TMEM88B-201ENST00000378821 TSPY4P0CV99 314 aa29.8■■■□□ 2.36
TMEM88B-201ENST00000378821 TSPY10P0CW01 314 aa29.8■■■□□ 2.36
TMEM88B-201ENST00000378821 FAM135AQ9P2D6 1515 aa29.8■■■□□ 2.36
TMEM88B-201ENST00000378821 PTPRTO14522 1441 aa29.76■■■□□ 2.35
TMEM88B-201ENST00000378821 KIF3BO15066 747 aa29.75■■■□□ 2.35
TMEM88B-201ENST00000378821 NCOA1Q15788 1441 aa29.74■■■□□ 2.35
TMEM88B-201ENST00000378821 ZNF142P52746 1687 aaPredicted RBP29.74■■■□□ 2.35
TMEM88B-201ENST00000378821 MYO3AQ8NEV4 1616 aa29.72■■■□□ 2.35
TMEM88B-201ENST00000378821 KDM5DQ9BY66 1539 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms