RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 FYCO1Q9BQS8 1478 aa30.76■■■□□ 2.51
TMEM88B-201ENST00000378821 SCAPERQ9BY12 1400 aa30.75■■■□□ 2.51
TMEM88B-201ENST00000378821 POGZQ7Z3K3 1410 aa30.74■■■□□ 2.51
TMEM88B-201ENST00000378821 ZFYVE16Q7Z3T8 1539 aa30.7■■■□□ 2.51
TMEM88B-201ENST00000378821 HECW2Q9P2P5 1572 aa30.69■■■□□ 2.5
TMEM88B-201ENST00000378821 YEATS2Q9ULM3 1422 aa30.68■■■□□ 2.5
TMEM88B-201ENST00000378821 PTPRMP28827 1452 aa30.68■■■□□ 2.5
TMEM88B-201ENST00000378821 CDC42BPBQ9Y5S2 1711 aa30.67■■■□□ 2.5
TMEM88B-201ENST00000378821 ARHGAP5Q13017 1502 aa30.65■■■□□ 2.5
TMEM88B-201ENST00000378821 SIGLEC1Q9BZZ2 1709 aa30.64■■■□□ 2.5
TMEM88B-201ENST00000378821 ARID4BQ4LE39 1312 aaPredicted RBP30.63■■■□□ 2.49
TMEM88B-201ENST00000378821 PREX2Q70Z35 1606 aa30.62■■■□□ 2.49
TMEM88B-201ENST00000378821 MADDQ8WXG6 1647 aa30.62■■■□□ 2.49
TMEM88B-201ENST00000378821 KDM5CP41229 1560 aa30.6■■■□□ 2.49
TMEM88B-201ENST00000378821 ZNF518AQ6AHZ1 1483 aa30.6■■■□□ 2.49
TMEM88B-201ENST00000378821 ATP10AO60312 1499 aa30.57■■■□□ 2.48
TMEM88B-201ENST00000378821 CDC42BPAQ5VT25 1732 aa30.56■■■□□ 2.48
TMEM88B-201ENST00000378821 AFAP1Q8N556 730 aa30.52■■■□□ 2.48
TMEM88B-201ENST00000378821 ABCC1P33527 1531 aa30.52■■■□□ 2.48
TMEM88B-201ENST00000378821 C9orf84Q5VXU9 1444 aa30.51■■■□□ 2.47
TMEM88B-201ENST00000378821 ARHGEF12Q9NZN5 1544 aa30.5■■■□□ 2.47
TMEM88B-201ENST00000378821 RIMS1Q86UR5 1692 aaKnown RBP30.49■■■□□ 2.47
TMEM88B-201ENST00000378821 MLH3Q9UHC1 1453 aa30.49■■■□□ 2.47
TMEM88B-201ENST00000378821 CEP162Q5TB80 1403 aa30.48■■■□□ 2.47
TMEM88B-201ENST00000378821 ITSN2Q9NZM3 1697 aa30.47■■■□□ 2.47
TMEM88B-201ENST00000378821 GPATCH8Q9UKJ3 1502 aaKnown RBP30.47■■■□□ 2.47
TMEM88B-201ENST00000378821 TRAPPC8Q9Y2L5 1435 aa30.45■■■□□ 2.46
TMEM88B-201ENST00000378821 REREQ9P2R6 1566 aa30.45■■■□□ 2.46
TMEM88B-201ENST00000378821 DIP2CQ9Y2E4 1556 aa30.43■■■□□ 2.46
TMEM88B-201ENST00000378821 FER1L4A9Z1Z3 1794 aa30.4■■■□□ 2.46
TMEM88B-201ENST00000378821 SAMD9LQ8IVG5 1584 aa30.4■■■□□ 2.46
TMEM88B-201ENST00000378821 ABCA6Q8N139 1617 aa30.38■■■□□ 2.45
TMEM88B-201ENST00000378821 MTUS2Q5JR59 1369 aa30.36■■■□□ 2.45
TMEM88B-201ENST00000378821 LMTK3Q96Q04 1460 aa30.36■■■□□ 2.45
TMEM88B-201ENST00000378821 KIDINS220Q9ULH0 1771 aa30.36■■■□□ 2.45
TMEM88B-201ENST00000378821 KIAA1107Q9UPP5 1409 aa30.35■■■□□ 2.45
TMEM88B-201ENST00000378821 MLECQ14165 292 aa30.34■■■□□ 2.45
TMEM88B-201ENST00000378821 AGLP35573 1532 aa30.33■■■□□ 2.45
TMEM88B-201ENST00000378821 CCNB3Q8WWL7 1395 aa30.32■■■□□ 2.44
TMEM88B-201ENST00000378821 EHBP1L1Q8N3D4 1523 aa30.32■■■□□ 2.44
TMEM88B-201ENST00000378821 SYCP2Q9BX26 1530 aa30.3■■■□□ 2.44
TMEM88B-201ENST00000378821 PLEKHH2Q8IVE3 1493 aa30.3■■■□□ 2.44
TMEM88B-201ENST00000378821 CFDP1Q9UEE9 299 aaPredicted RBP30.29■■■□□ 2.44
TMEM88B-201ENST00000378821 ZNF777Q9ULD5 760 aaPredicted RBP30.28■■■□□ 2.44
TMEM88B-201ENST00000378821 MYT1LQ9UL68 1186 aa30.27■■■□□ 2.44
TMEM88B-201ENST00000378821 TIAM1Q13009 1591 aa30.27■■■□□ 2.44
TMEM88B-201ENST00000378821 LOC105371045A0A1W2PR82 267 aa30.26■■■□□ 2.43
TMEM88B-201ENST00000378821 HNRNPMP52272 730 aaKnown RBP eCLIP30.25■■■□□ 2.43
TMEM88B-201ENST00000378821 SPAG9O60271 1321 aaKnown RBP30.2■■■□□ 2.42
TMEM88B-201ENST00000378821 INO80Q9ULG1 1556 aaPredicted RBP30.2■■■□□ 2.42
TMEM88B-201ENST00000378821 VPS8Q8N3P4 1428 aa30.19■■■□□ 2.42
TMEM88B-201ENST00000378821 ATP7AQ04656 1500 aa30.17■■■□□ 2.42
TMEM88B-201ENST00000378821 MBD5Q9P267 1494 aa30.17■■■□□ 2.42
TMEM88B-201ENST00000378821 SUPT6HQ7KZ85 1726 aaKnown RBP30.15■■■□□ 2.42
TMEM88B-201ENST00000378821 PLPPR3Q6T4P5 718 aa30.14■■■□□ 2.42
TMEM88B-201ENST00000378821 ZNF644Q9H582 1327 aaPredicted RBP30.14■■■□□ 2.42
TMEM88B-201ENST00000378821 NCOA2Q15596 1464 aa30.13■■■□□ 2.41
TMEM88B-201ENST00000378821 CEBPAP49715 358 aaPredicted RBP30.13■■■□□ 2.41
TMEM88B-201ENST00000378821 ILDR1Q86SU0 546 aaPredicted RBP30.13■■■□□ 2.41
TMEM88B-201ENST00000378821 PREX1Q8TCU6 1659 aa30.13■■■□□ 2.41
TMEM88B-201ENST00000378821 PLXNC1O60486 1568 aa30.12■■■□□ 2.41
TMEM88B-201ENST00000378821 SETD1BQ9UPS6 1966 aaKnown RBP30.12■■■□□ 2.41
TMEM88B-201ENST00000378821 C3P01024 1663 aa30.11■■■□□ 2.41
TMEM88B-201ENST00000378821 MAP3K1Q13233 1512 aa30.1■■■□□ 2.41
TMEM88B-201ENST00000378821 HSPA2P54652 639 aa30.09■■■□□ 2.41
TMEM88B-201ENST00000378821 CNTLNQ9NXG0 1405 aa30.08■■■□□ 2.41
TMEM88B-201ENST00000378821 A2MP01023 1474 aa30.07■■■□□ 2.4
TMEM88B-201ENST00000378821 RTEL1-TNFRSF6BF6WH68 1400 aa30.07■■■□□ 2.4
TMEM88B-201ENST00000378821 LRRC9Q6ZRR7 1453 aa30.06■■■□□ 2.4
TMEM88B-201ENST00000378821 ADGBQ8N7X0 1667 aa30.05■■■□□ 2.4
TMEM88B-201ENST00000378821 MROH2AA6NES4 1674 aa30.04■■■□□ 2.4
TMEM88B-201ENST00000378821 RSPH4AQ5TD94 716 aa30.01■■■□□ 2.39
TMEM88B-201ENST00000378821 ESF1Q9H501 851 aaKnown RBP30.01■■■□□ 2.39
TMEM88B-201ENST00000378821 CAMSAP2Q08AD1 1489 aa30■■■□□ 2.39
TMEM88B-201ENST00000378821 UHRF1BP1Q6BDS2 1440 aa29.98■■■□□ 2.39
TMEM88B-201ENST00000378821 CCDC141Q6ZP82 1450 aa29.97■■■□□ 2.39
TMEM88B-201ENST00000378821 ARHGEF5Q12774 1597 aa29.96■■■□□ 2.39
TMEM88B-201ENST00000378821 PPP6R1Q9UPN7 881 aa29.95■■■□□ 2.39
TMEM88B-201ENST00000378821 ZMYM3Q14202 1370 aa29.94■■■□□ 2.38
TMEM88B-201ENST00000378821 KANK4Q5T7N3 995 aaPredicted RBP29.94■■■□□ 2.38
TMEM88B-201ENST00000378821 NPATQ14207 1427 aa29.94■■■□□ 2.38
TMEM88B-201ENST00000378821 DHX29Q7Z478 1369 aaKnown RBP29.93■■■□□ 2.38
TMEM88B-201ENST00000378821 STRCQ7RTU9 1775 aa29.92■■■□□ 2.38
TMEM88B-201ENST00000378821 CLTCQ00610 1675 aaKnown RBP29.9■■■□□ 2.38
TMEM88B-201ENST00000378821 MIA2Q96PC5 1412 aa29.87■■■□□ 2.37
TMEM88B-201ENST00000378821 FBXO41Q8TF61 875 aa29.86■■■□□ 2.37
TMEM88B-201ENST00000378821 GGT6Q6P531 493 aa29.85■■■□□ 2.37
TMEM88B-201ENST00000378821 MYOM3Q5VTT5 1437 aa29.84■■■□□ 2.37
TMEM88B-201ENST00000378821 PTPRKQ15262 1439 aa29.82■■■□□ 2.36
TMEM88B-201ENST00000378821 MAST1Q9Y2H9 1570 aa29.81■■■□□ 2.36
TMEM88B-201ENST00000378821 DMRT2Q9Y5R5 561 aa29.81■■■□□ 2.36
TMEM88B-201ENST00000378821 TSPY4P0CV99 314 aa29.8■■■□□ 2.36
TMEM88B-201ENST00000378821 TSPY10P0CW01 314 aa29.8■■■□□ 2.36
TMEM88B-201ENST00000378821 FAM135AQ9P2D6 1515 aa29.8■■■□□ 2.36
TMEM88B-201ENST00000378821 PTPRTO14522 1441 aa29.76■■■□□ 2.35
TMEM88B-201ENST00000378821 KIF3BO15066 747 aa29.75■■■□□ 2.35
TMEM88B-201ENST00000378821 NCOA1Q15788 1441 aa29.74■■■□□ 2.35
TMEM88B-201ENST00000378821 ZNF142P52746 1687 aaPredicted RBP29.74■■■□□ 2.35
TMEM88B-201ENST00000378821 MYO3AQ8NEV4 1616 aa29.72■■■□□ 2.35
TMEM88B-201ENST00000378821 KDM5DQ9BY66 1539 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms