RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 PHLDB1Q86UU1 1377 aa27.01■■□□□ 1.91
ITM2B-201ENST00000378549 NCOA2Q15596 1464 aa27■■□□□ 1.91
ITM2B-201ENST00000378549 CCNB3Q8WWL7 1395 aa26.98■■□□□ 1.91
ITM2B-201ENST00000378549 KANK4Q5T7N3 995 aaPredicted RBP26.97■■□□□ 1.91
ITM2B-201ENST00000378549 GPATCH8Q9UKJ3 1502 aaKnown RBP26.96■■□□□ 1.91
ITM2B-201ENST00000378549 EFCAB2Q5VUJ9 269 aa26.95■■□□□ 1.9
ITM2B-201ENST00000378549 AKNAQ7Z591 1439 aa26.95■■□□□ 1.9
ITM2B-201ENST00000378549 ADGRL1O94910 1474 aa26.92■■□□□ 1.9
ITM2B-201ENST00000378549 COL17A1Q9UMD9 1497 aaPredicted RBP26.92■■□□□ 1.9
ITM2B-201ENST00000378549 RICTORQ6R327 1708 aa26.9■■□□□ 1.9
ITM2B-201ENST00000378549 SAMD9LQ8IVG5 1584 aa26.87■■□□□ 1.89
ITM2B-201ENST00000378549 ABCC1P33527 1531 aa26.86■■□□□ 1.89
ITM2B-201ENST00000378549 CFDP1Q9UEE9 299 aaPredicted RBP26.86■■□□□ 1.89
ITM2B-201ENST00000378549 DENND4BO75064 1496 aaPredicted RBP26.86■■□□□ 1.89
ITM2B-201ENST00000378549 FRMPD1Q5SYB0 1578 aa26.84■■□□□ 1.89
ITM2B-201ENST00000378549 SCAPERQ9BY12 1400 aa26.83■■□□□ 1.89
ITM2B-201ENST00000378549 ZNF777Q9ULD5 760 aaPredicted RBP26.82■■□□□ 1.88
ITM2B-201ENST00000378549 MYOM3Q5VTT5 1437 aa26.81■■□□□ 1.88
ITM2B-201ENST00000378549 PLEKHH2Q8IVE3 1493 aa26.81■■□□□ 1.88
ITM2B-201ENST00000378549 POGZQ7Z3K3 1410 aa26.8■■□□□ 1.88
ITM2B-201ENST00000378549 SYCP2Q9BX26 1530 aa26.79■■□□□ 1.88
ITM2B-201ENST00000378549 RAPGEF3O95398 923 aa26.78■■□□□ 1.88
ITM2B-201ENST00000378549 ZMYM4Q5VZL5 1548 aa26.76■■□□□ 1.87
ITM2B-201ENST00000378549 ZNF518AQ6AHZ1 1483 aa26.76■■□□□ 1.87
ITM2B-201ENST00000378549 CAMSAP2Q08AD1 1489 aa26.75■■□□□ 1.87
ITM2B-201ENST00000378549 MIA2Q96PC5 1412 aa26.74■■□□□ 1.87
ITM2B-201ENST00000378549 ARHGEF12Q9NZN5 1544 aa26.74■■□□□ 1.87
ITM2B-201ENST00000378549 KIAA1107Q9UPP5 1409 aa26.73■■□□□ 1.87
ITM2B-201ENST00000378549 KDM5CP41229 1560 aa26.73■■□□□ 1.87
ITM2B-201ENST00000378549 PTPN23Q9H3S7 1636 aa26.7■■□□□ 1.86
ITM2B-201ENST00000378549 HECW2Q9P2P5 1572 aa26.7■■□□□ 1.86
ITM2B-201ENST00000378549 ZNF644Q9H582 1327 aaPredicted RBP26.68■■□□□ 1.86
ITM2B-201ENST00000378549 TRAPPC8Q9Y2L5 1435 aa26.68■■□□□ 1.86
ITM2B-201ENST00000378549 ARHGEF40Q8TER5 1519 aa26.68■■□□□ 1.86
ITM2B-201ENST00000378549 FGD6Q6ZV73 1430 aa26.67■■□□□ 1.86
ITM2B-201ENST00000378549 ZFYVE16Q7Z3T8 1539 aa26.67■■□□□ 1.86
ITM2B-201ENST00000378549 PPARGC1BQ86YN6 1023 aaKnown RBP26.67■■□□□ 1.86
ITM2B-201ENST00000378549 MAGI2Q86UL8 1455 aa26.67■■□□□ 1.86
ITM2B-201ENST00000378549 HNRNPMP52272 730 aaKnown RBP eCLIP26.65■■□□□ 1.86
ITM2B-201ENST00000378549 ARHGEF5Q12774 1597 aa26.64■■□□□ 1.86
ITM2B-201ENST00000378549 AFAP1Q8N556 730 aa26.64■■□□□ 1.86
ITM2B-201ENST00000378549 MBD5Q9P267 1494 aa26.62■■□□□ 1.85
ITM2B-201ENST00000378549 CCDC141Q6ZP82 1450 aa26.62■■□□□ 1.85
ITM2B-201ENST00000378549 KIDINS220Q9ULH0 1771 aa26.61■■□□□ 1.85
ITM2B-201ENST00000378549 MYT1LQ9UL68 1186 aa26.6■■□□□ 1.85
ITM2B-201ENST00000378549 TCOF1Q13428 1488 aaKnown RBP26.6■■□□□ 1.85
ITM2B-201ENST00000378549 MLH3Q9UHC1 1453 aa26.6■■□□□ 1.85
ITM2B-201ENST00000378549 INO80Q9ULG1 1556 aaPredicted RBP26.59■■□□□ 1.85
ITM2B-201ENST00000378549 YEATS2Q9ULM3 1422 aa26.57■■□□□ 1.84
ITM2B-201ENST00000378549 CROCC2H7BZ55 1655 aa26.57■■□□□ 1.84
ITM2B-201ENST00000378549 ATP7AQ04656 1500 aa26.57■■□□□ 1.84
ITM2B-201ENST00000378549 ABCA6Q8N139 1617 aa26.57■■□□□ 1.84
ITM2B-201ENST00000378549 RSPH4AQ5TD94 716 aa26.56■■□□□ 1.84
ITM2B-201ENST00000378549 SPAG9O60271 1321 aaKnown RBP26.56■■□□□ 1.84
ITM2B-201ENST00000378549 DIP2CQ9Y2E4 1556 aa26.55■■□□□ 1.84
ITM2B-201ENST00000378549 DNMT1P26358 1616 aaKnown RBP26.54■■□□□ 1.84
ITM2B-201ENST00000378549 ADGBQ8N7X0 1667 aa26.5■■□□□ 1.83
ITM2B-201ENST00000378549 ATP10AO60312 1499 aa26.5■■□□□ 1.83
ITM2B-201ENST00000378549 MAST1Q9Y2H9 1570 aa26.5■■□□□ 1.83
ITM2B-201ENST00000378549 C9orf84Q5VXU9 1444 aa26.49■■□□□ 1.83
ITM2B-201ENST00000378549 FAM50AQ14320 339 aaKnown RBP26.48■■□□□ 1.83
ITM2B-201ENST00000378549 RTEL1-TNFRSF6BF6WH68 1400 aa26.48■■□□□ 1.83
ITM2B-201ENST00000378549 REREQ9P2R6 1566 aa26.47■■□□□ 1.83
ITM2B-201ENST00000378549 TSPY4P0CV99 314 aa26.47■■□□□ 1.83
ITM2B-201ENST00000378549 TSPY10P0CW01 314 aa26.47■■□□□ 1.83
ITM2B-201ENST00000378549 SIGLEC1Q9BZZ2 1709 aa26.47■■□□□ 1.83
ITM2B-201ENST00000378549 SHANK2Q9UPX8 1470 aa26.46■■□□□ 1.83
ITM2B-201ENST00000378549 DAPK1P53355 1430 aa26.46■■□□□ 1.83
ITM2B-201ENST00000378549 ABCC5O15440 1437 aa26.43■■□□□ 1.82
ITM2B-201ENST00000378549 PLXNC1O60486 1568 aa26.41■■□□□ 1.82
ITM2B-201ENST00000378549 RRBP1Q9P2E9 1410 aaKnown RBP26.41■■□□□ 1.82
ITM2B-201ENST00000378549 ARID4BQ4LE39 1312 aaPredicted RBP26.4■■□□□ 1.82
ITM2B-201ENST00000378549 BCORL1Q5H9F3 1711 aa26.4■■□□□ 1.82
ITM2B-201ENST00000378549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.39■■□□□ 1.82
ITM2B-201ENST00000378549 A2MP01023 1474 aa26.37■■□□□ 1.81
ITM2B-201ENST00000378549 AGLP35573 1532 aa26.35■■□□□ 1.81
ITM2B-201ENST00000378549 ADAMTSL3P82987 1691 aa26.31■■□□□ 1.8
ITM2B-201ENST00000378549 FER1L4A9Z1Z3 1794 aa26.31■■□□□ 1.8
ITM2B-201ENST00000378549 ANKRD30AQ9BXX3 1397 aa26.29■■□□□ 1.8
ITM2B-201ENST00000378549 ADGRL2O95490 1459 aa26.29■■□□□ 1.8
ITM2B-201ENST00000378549 DUOX2Q9NRD8 1548 aa26.29■■□□□ 1.8
ITM2B-201ENST00000378549 CHIC2Q9UKJ5 165 aa26.28■■□□□ 1.8
ITM2B-201ENST00000378549 MADDQ8WXG6 1647 aa26.28■■□□□ 1.8
ITM2B-201ENST00000378549 DHX29Q7Z478 1369 aaKnown RBP26.27■■□□□ 1.8
ITM2B-201ENST00000378549 EIF2AK4Q9P2K8 1649 aaKnown RBP26.27■■□□□ 1.8
ITM2B-201ENST00000378549 KIF15Q9NS87 1388 aa26.26■■□□□ 1.79
ITM2B-201ENST00000378549 ITGAEP38570 1179 aa26.25■■□□□ 1.79
ITM2B-201ENST00000378549 MLECQ14165 292 aa26.24■■□□□ 1.79
ITM2B-201ENST00000378549 RIMS1Q86UR5 1692 aaKnown RBP26.24■■□□□ 1.79
ITM2B-201ENST00000378549 PTPRKQ15262 1439 aa26.23■■□□□ 1.79
ITM2B-201ENST00000378549 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
ITM2B-201ENST00000378549 KDM4FA0A1W2PPD8 638 aa26.22■■□□□ 1.79
ITM2B-201ENST00000378549 RRP7BPQ9NSQ0 103 aa26.21■■□□□ 1.79
ITM2B-201ENST00000378549 ERBINQ96RT1 1412 aa26.2■■□□□ 1.78
ITM2B-201ENST00000378549 ROCK1Q13464 1354 aa26.19■■□□□ 1.78
ITM2B-201ENST00000378549 RNF17Q9BXT8 1623 aaKnown RBP26.18■■□□□ 1.78
ITM2B-201ENST00000378549 KIF3BO15066 747 aa26.16■■□□□ 1.78
ITM2B-201ENST00000378549 CLTCQ00610 1675 aaKnown RBP26.13■■□□□ 1.77
ITM2B-201ENST00000378549 GCC2Q8IWJ2 1684 aa26.13■■□□□ 1.77
ITM2B-201ENST00000378549 GGT6Q6P531 493 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms