RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 ITSN2Q9NZM3 1697 aa31.38■■■□□ 2.61
RER1-204ENST00000378518 AKNAQ7Z591 1439 aa31.37■■■□□ 2.61
RER1-204ENST00000378518 CCNB3Q8WWL7 1395 aa31.36■■■□□ 2.61
RER1-204ENST00000378518 EFCAB2Q5VUJ9 269 aa31.36■■■□□ 2.61
RER1-204ENST00000378518 COL17A1Q9UMD9 1497 aaPredicted RBP31.34■■■□□ 2.61
RER1-204ENST00000378518 NCOA2Q15596 1464 aa31.33■■■□□ 2.61
RER1-204ENST00000378518 GPATCH8Q9UKJ3 1502 aaKnown RBP31.32■■■□□ 2.6
RER1-204ENST00000378518 ADGRL1O94910 1474 aa31.3■■■□□ 2.6
RER1-204ENST00000378518 KANK4Q5T7N3 995 aaPredicted RBP31.3■■■□□ 2.6
RER1-204ENST00000378518 DENND4BO75064 1496 aaPredicted RBP31.27■■■□□ 2.6
RER1-204ENST00000378518 RICTORQ6R327 1708 aa31.25■■■□□ 2.59
RER1-204ENST00000378518 CFDP1Q9UEE9 299 aaPredicted RBP31.23■■■□□ 2.59
RER1-204ENST00000378518 SCAPERQ9BY12 1400 aa31.22■■■□□ 2.59
RER1-204ENST00000378518 ABCC1P33527 1531 aa31.21■■■□□ 2.59
RER1-204ENST00000378518 FRMPD1Q5SYB0 1578 aa31.21■■■□□ 2.59
RER1-204ENST00000378518 SAMD9LQ8IVG5 1584 aa31.21■■■□□ 2.59
RER1-204ENST00000378518 ZNF777Q9ULD5 760 aaPredicted RBP31.19■■■□□ 2.58
RER1-204ENST00000378518 RAPGEF3O95398 923 aa31.17■■■□□ 2.58
RER1-204ENST00000378518 POGZQ7Z3K3 1410 aa31.16■■■□□ 2.58
RER1-204ENST00000378518 PLEKHH2Q8IVE3 1493 aa31.16■■■□□ 2.58
RER1-204ENST00000378518 ZNF518AQ6AHZ1 1483 aa31.13■■■□□ 2.57
RER1-204ENST00000378518 ZMYM4Q5VZL5 1548 aa31.12■■■□□ 2.57
RER1-204ENST00000378518 MYOM3Q5VTT5 1437 aa31.11■■■□□ 2.57
RER1-204ENST00000378518 SYCP2Q9BX26 1530 aa31.11■■■□□ 2.57
RER1-204ENST00000378518 KIAA1107Q9UPP5 1409 aa31.07■■■□□ 2.57
RER1-204ENST00000378518 ARHGEF12Q9NZN5 1544 aa31.07■■■□□ 2.56
RER1-204ENST00000378518 KDM5CP41229 1560 aa31.06■■■□□ 2.56
RER1-204ENST00000378518 CAMSAP2Q08AD1 1489 aa31.06■■■□□ 2.56
RER1-204ENST00000378518 MIA2Q96PC5 1412 aa31.06■■■□□ 2.56
RER1-204ENST00000378518 MAGI2Q86UL8 1455 aa31.04■■■□□ 2.56
RER1-204ENST00000378518 ARHGEF40Q8TER5 1519 aa31.03■■■□□ 2.56
RER1-204ENST00000378518 HECW2Q9P2P5 1572 aa31.02■■■□□ 2.56
RER1-204ENST00000378518 TRAPPC8Q9Y2L5 1435 aa31.02■■■□□ 2.56
RER1-204ENST00000378518 ZFYVE16Q7Z3T8 1539 aa31.02■■■□□ 2.56
RER1-204ENST00000378518 ZNF644Q9H582 1327 aaPredicted RBP31■■■□□ 2.55
RER1-204ENST00000378518 AFAP1Q8N556 730 aa31■■■□□ 2.55
RER1-204ENST00000378518 HNRNPMP52272 730 aaKnown RBP eCLIP30.99■■■□□ 2.553e-7■■■□□ 17.8
RER1-204ENST00000378518 PTPN23Q9H3S7 1636 aa30.98■■■□□ 2.55
RER1-204ENST00000378518 MYT1LQ9UL68 1186 aa30.96■■■□□ 2.55
RER1-204ENST00000378518 FGD6Q6ZV73 1430 aa30.95■■■□□ 2.54
RER1-204ENST00000378518 ARHGEF5Q12774 1597 aa30.94■■■□□ 2.54
RER1-204ENST00000378518 MBD5Q9P267 1494 aa30.94■■■□□ 2.54
RER1-204ENST00000378518 MLH3Q9UHC1 1453 aa30.94■■■□□ 2.54
RER1-204ENST00000378518 PPARGC1BQ86YN6 1023 aaKnown RBP30.92■■■□□ 2.54
RER1-204ENST00000378518 CCDC141Q6ZP82 1450 aa30.92■■■□□ 2.54
RER1-204ENST00000378518 YEATS2Q9ULM3 1422 aa30.91■■■□□ 2.54
RER1-204ENST00000378518 RSPH4AQ5TD94 716 aa30.91■■■□□ 2.54
RER1-204ENST00000378518 KIDINS220Q9ULH0 1771 aa30.9■■■□□ 2.54
RER1-204ENST00000378518 SPAG9O60271 1321 aaKnown RBP30.89■■■□□ 2.54
RER1-204ENST00000378518 INO80Q9ULG1 1556 aaPredicted RBP30.88■■■□□ 2.53
RER1-204ENST00000378518 TCOF1Q13428 1488 aaKnown RBP30.88■■■□□ 2.53
RER1-204ENST00000378518 ATP7AQ04656 1500 aa30.88■■■□□ 2.53
RER1-204ENST00000378518 ABCA6Q8N139 1617 aa30.87■■■□□ 2.53
RER1-204ENST00000378518 DIP2CQ9Y2E4 1556 aa30.87■■■□□ 2.53
RER1-204ENST00000378518 ATP10AO60312 1499 aa30.85■■■□□ 2.53
RER1-204ENST00000378518 C9orf84Q5VXU9 1444 aa30.83■■■□□ 2.53
RER1-204ENST00000378518 CROCC2H7BZ55 1655 aa30.81■■■□□ 2.52
RER1-204ENST00000378518 REREQ9P2R6 1566 aa30.79■■■□□ 2.52
RER1-204ENST00000378518 TSPY4P0CV99 314 aa30.79■■■□□ 2.52
RER1-204ENST00000378518 TSPY10P0CW01 314 aa30.79■■■□□ 2.52
RER1-204ENST00000378518 DNMT1P26358 1616 aaKnown RBP30.79■■■□□ 2.52
RER1-204ENST00000378518 RTEL1-TNFRSF6BF6WH68 1400 aa30.79■■■□□ 2.52
RER1-204ENST00000378518 ADGBQ8N7X0 1667 aa30.78■■■□□ 2.52
RER1-204ENST00000378518 ARID4BQ4LE39 1312 aaPredicted RBP30.77■■■□□ 2.52
RER1-204ENST00000378518 MAST1Q9Y2H9 1570 aa30.77■■■□□ 2.52
RER1-204ENST00000378518 FAM50AQ14320 339 aaKnown RBP30.75■■■□□ 2.51
RER1-204ENST00000378518 SIGLEC1Q9BZZ2 1709 aa30.74■■■□□ 2.51
RER1-204ENST00000378518 BCORL1Q5H9F3 1711 aa30.73■■■□□ 2.51
RER1-204ENST00000378518 DAPK1P53355 1430 aa30.72■■■□□ 2.51
RER1-204ENST00000378518 SHANK2Q9UPX8 1470 aa30.71■■■□□ 2.51
RER1-204ENST00000378518 ABCC5O15440 1437 aa30.69■■■□□ 2.5
RER1-204ENST00000378518 A2MP01023 1474 aa30.67■■■□□ 2.5
RER1-204ENST00000378518 PLXNC1O60486 1568 aa30.66■■■□□ 2.5
RER1-204ENST00000378518 AGLP35573 1532 aa30.66■■■□□ 2.5
RER1-204ENST00000378518 ADAMTSL3P82987 1691 aa30.63■■■□□ 2.49
RER1-204ENST00000378518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.63■■■□□ 2.494e-7■■■■□ 23.8
RER1-204ENST00000378518 RRBP1Q9P2E9 1410 aaKnown RBP30.63■■■□□ 2.49
RER1-204ENST00000378518 KDM4FA0A1W2PPD8 638 aa30.61■■■□□ 2.49
RER1-204ENST00000378518 FER1L4A9Z1Z3 1794 aa30.58■■■□□ 2.49
RER1-204ENST00000378518 DHX29Q7Z478 1369 aaKnown RBP30.57■■■□□ 2.48
RER1-204ENST00000378518 MADDQ8WXG6 1647 aa30.57■■■□□ 2.48
RER1-204ENST00000378518 MLECQ14165 292 aa30.56■■■□□ 2.48
RER1-204ENST00000378518 ANKRD30AQ9BXX3 1397 aa30.54■■■□□ 2.48
RER1-204ENST00000378518 DUOX2Q9NRD8 1548 aa30.53■■■□□ 2.48
RER1-204ENST00000378518 RIMS1Q86UR5 1692 aaKnown RBP30.52■■■□□ 2.48
RER1-204ENST00000378518 ADGRL2O95490 1459 aa30.52■■■□□ 2.48
RER1-204ENST00000378518 CHIC2Q9UKJ5 165 aa30.52■■■□□ 2.48
RER1-204ENST00000378518 KIF15Q9NS87 1388 aa30.51■■■□□ 2.47
RER1-204ENST00000378518 EIF2AK4Q9P2K8 1649 aaKnown RBP30.51■■■□□ 2.47
RER1-204ENST00000378518 AEBP2Q6ZN18 517 aaPredicted RBP30.48■■■□□ 2.47
RER1-204ENST00000378518 NCOA1Q15788 1441 aa30.47■■■□□ 2.47
RER1-204ENST00000378518 ITGAEP38570 1179 aa30.46■■■□□ 2.47
RER1-204ENST00000378518 RRP7BPQ9NSQ0 103 aa30.46■■■□□ 2.47
RER1-204ENST00000378518 PTPRKQ15262 1439 aa30.44■■■□□ 2.46
RER1-204ENST00000378518 ERBINQ96RT1 1412 aa30.44■■■□□ 2.46
RER1-204ENST00000378518 ESF1Q9H501 851 aaKnown RBP30.43■■■□□ 2.46
RER1-204ENST00000378518 KIF3BO15066 747 aa30.42■■■□□ 2.46
RER1-204ENST00000378518 ROCK1Q13464 1354 aa30.41■■■□□ 2.46
RER1-204ENST00000378518 RNF17Q9BXT8 1623 aaKnown RBP30.4■■■□□ 2.46
RER1-204ENST00000378518 PTPRMP28827 1452 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms