RNA–Protein interactions for RNA: ENST00000378441.6

CDNF-201, Transcript of cerebral dopamine neurotrophic factor, humanhuman

TSL 2

Gene CDNF, Length 891 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDNF-201ENST00000378441 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.34
CDNF-201ENST00000378441 KIF21BO75037 1637 aa12.95□□□□□ -0.34
CDNF-201ENST00000378441 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
CDNF-201ENST00000378441 RANGAP1P46060 587 aaPredicted RBP12.94□□□□□ -0.34
CDNF-201ENST00000378441 ARAP3Q8WWN8 1544 aa12.93□□□□□ -0.34
CDNF-201ENST00000378441 ADGRL1O94910 1474 aa12.91□□□□□ -0.34
CDNF-201ENST00000378441 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
CDNF-201ENST00000378441 ABCA9Q8IUA7 1624 aa12.91□□□□□ -0.34
CDNF-201ENST00000378441 EFCAB5A4FU69 1503 aa12.9□□□□□ -0.34
CDNF-201ENST00000378441 PLEKHD1A6NEE1 506 aa12.88□□□□□ -0.35
CDNF-201ENST00000378441 UBTFP17480 764 aaKnown RBP12.87□□□□□ -0.35
CDNF-201ENST00000378441 NEO1Q92859 1461 aa12.86□□□□□ -0.35
CDNF-201ENST00000378441 RAPGEF3O95398 923 aa12.85□□□□□ -0.35
CDNF-201ENST00000378441 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
CDNF-201ENST00000378441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDNF-201ENST00000378441 FMN1Q68DA7 1419 aa12.81□□□□□ -0.36
CDNF-201ENST00000378441 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
CDNF-201ENST00000378441 AKNAQ7Z591 1439 aa12.79□□□□□ -0.36
CDNF-201ENST00000378441 FRMPD1Q5SYB0 1578 aa12.78□□□□□ -0.36
CDNF-201ENST00000378441 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
CDNF-201ENST00000378441 PLCH2O75038 1416 aa12.77□□□□□ -0.37
CDNF-201ENST00000378441 FANCAO15360 1455 aa12.77□□□□□ -0.37
CDNF-201ENST00000378441 DENND4BO75064 1496 aaPredicted RBP12.77□□□□□ -0.37
CDNF-201ENST00000378441 TTC37Q6PGP7 1564 aa12.76□□□□□ -0.37
CDNF-201ENST00000378441 CDK11AQ9UQ88 783 aaPredicted RBP12.74□□□□□ -0.37
CDNF-201ENST00000378441 ATP1B4Q9UN42 357 aaPredicted RBP12.73□□□□□ -0.37
CDNF-201ENST00000378441 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
CDNF-201ENST00000378441 TROQ12816 1431 aaPredicted RBP12.72□□□□□ -0.37
CDNF-201ENST00000378441 ADAMTSL3P82987 1691 aa12.71□□□□□ -0.37
CDNF-201ENST00000378441 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
CDNF-201ENST00000378441 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
CDNF-201ENST00000378441 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
CDNF-201ENST00000378441 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.38
CDNF-201ENST00000378441 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
CDNF-201ENST00000378441 ZMYM4Q5VZL5 1548 aa12.7□□□□□ -0.38
CDNF-201ENST00000378441 RICTORQ6R327 1708 aa12.7□□□□□ -0.38
CDNF-201ENST00000378441 CASKIN1Q8WXD9 1431 aa12.7□□□□□ -0.38
CDNF-201ENST00000378441 HECW2Q9P2P5 1572 aa12.69□□□□□ -0.38
CDNF-201ENST00000378441 PTPRMP28827 1452 aa12.69□□□□□ -0.38
CDNF-201ENST00000378441 MAGI2Q86UL8 1455 aa12.69□□□□□ -0.38
CDNF-201ENST00000378441 YEATS2Q9ULM3 1422 aa12.69□□□□□ -0.38
CDNF-201ENST00000378441 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
CDNF-201ENST00000378441 ARHGEF40Q8TER5 1519 aa12.68□□□□□ -0.38
CDNF-201ENST00000378441 POTEHQ6S545 545 aa12.68□□□□□ -0.38
CDNF-201ENST00000378441 POGZQ7Z3K3 1410 aa12.68□□□□□ -0.38
CDNF-201ENST00000378441 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
CDNF-201ENST00000378441 KIF14Q15058 1648 aa12.66□□□□□ -0.38
CDNF-201ENST00000378441 ARID4BQ4LE39 1312 aaPredicted RBP12.66□□□□□ -0.38
CDNF-201ENST00000378441 BCORL1Q5H9F3 1711 aa12.66□□□□□ -0.38
CDNF-201ENST00000378441 LRRIQ1Q96JM4 1722 aa12.65□□□□□ -0.38
CDNF-201ENST00000378441 CLIP1P30622 1438 aa12.65□□□□□ -0.38
CDNF-201ENST00000378441 ZFYVE16Q7Z3T8 1539 aa12.65□□□□□ -0.38
CDNF-201ENST00000378441 SPDYE4A6NLX3 237 aa12.64□□□□□ -0.39
CDNF-201ENST00000378441 AFAP1Q8N556 730 aa12.64□□□□□ -0.39
CDNF-201ENST00000378441 CCDC18Q5T9S5 1454 aa12.64□□□□□ -0.39
CDNF-201ENST00000378441 PCF11O94913 1555 aaKnown RBP12.64□□□□□ -0.39
CDNF-201ENST00000378441 SIGLEC1Q9BZZ2 1709 aa12.62□□□□□ -0.39
CDNF-201ENST00000378441 ATP10AO60312 1499 aa12.62□□□□□ -0.39
CDNF-201ENST00000378441 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
CDNF-201ENST00000378441 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
CDNF-201ENST00000378441 FYCO1Q9BQS8 1478 aa12.61□□□□□ -0.39
CDNF-201ENST00000378441 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
CDNF-201ENST00000378441 MYO5CQ9NQX4 1742 aa12.61□□□□□ -0.39
CDNF-201ENST00000378441 ZNF518AQ6AHZ1 1483 aa12.6□□□□□ -0.39
CDNF-201ENST00000378441 ARHGAP5Q13017 1502 aa12.6□□□□□ -0.39
CDNF-201ENST00000378441 ARHGEF12Q9NZN5 1544 aa12.6□□□□□ -0.39
CDNF-201ENST00000378441 KDM5CP41229 1560 aa12.6□□□□□ -0.39
CDNF-201ENST00000378441 FKBP8Q14318 412 aa12.59□□□□□ -0.39
CDNF-201ENST00000378441 C9orf84Q5VXU9 1444 aa12.59□□□□□ -0.39
CDNF-201ENST00000378441 ILDR1Q86SU0 546 aaPredicted RBP12.58□□□□□ -0.4
CDNF-201ENST00000378441 TRAPPC8Q9Y2L5 1435 aa12.58□□□□□ -0.4
CDNF-201ENST00000378441 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
CDNF-201ENST00000378441 CDC42BPBQ9Y5S2 1711 aa12.57□□□□□ -0.4
CDNF-201ENST00000378441 MLECQ14165 292 aa12.57□□□□□ -0.4
CDNF-201ENST00000378441 LMTK3Q96Q04 1460 aa12.57□□□□□ -0.4
CDNF-201ENST00000378441 PREX2Q70Z35 1606 aa12.55□□□□□ -0.4
CDNF-201ENST00000378441 ABCC1P33527 1531 aa12.55□□□□□ -0.4
CDNF-201ENST00000378441 GPATCH8Q9UKJ3 1502 aaKnown RBP12.55□□□□□ -0.4
CDNF-201ENST00000378441 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
CDNF-201ENST00000378441 REREQ9P2R6 1566 aa12.53□□□□□ -0.4
CDNF-201ENST00000378441 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
CDNF-201ENST00000378441 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.4
CDNF-201ENST00000378441 CEP162Q5TB80 1403 aa12.51□□□□□ -0.41
CDNF-201ENST00000378441 KIAA1107Q9UPP5 1409 aa12.51□□□□□ -0.41
CDNF-201ENST00000378441 AGLP35573 1532 aa12.51□□□□□ -0.41
CDNF-201ENST00000378441 CDC42BPAQ5VT25 1732 aa12.51□□□□□ -0.41
CDNF-201ENST00000378441 CEBPAP49715 358 aaPredicted RBP12.5□□□□□ -0.41
CDNF-201ENST00000378441 HNRNPMP52272 730 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDNF-201ENST00000378441 HSPA2P54652 639 aa12.5□□□□□ -0.41
CDNF-201ENST00000378441 ZNF777Q9ULD5 760 aaPredicted RBP12.5□□□□□ -0.41
CDNF-201ENST00000378441 ABCA6Q8N139 1617 aa12.49□□□□□ -0.41
CDNF-201ENST00000378441 SAMD9LQ8IVG5 1584 aa12.49□□□□□ -0.41
CDNF-201ENST00000378441 MTUS2Q5JR59 1369 aa12.49□□□□□ -0.41
CDNF-201ENST00000378441 CFDP1Q9UEE9 299 aaPredicted RBP12.49□□□□□ -0.41
CDNF-201ENST00000378441 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
CDNF-201ENST00000378441 ITSN2Q9NZM3 1697 aa12.48□□□□□ -0.41
CDNF-201ENST00000378441 CCNB3Q8WWL7 1395 aa12.48□□□□□ -0.41
CDNF-201ENST00000378441 KIDINS220Q9ULH0 1771 aa12.47□□□□□ -0.41
CDNF-201ENST00000378441 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
CDNF-201ENST00000378441 FER1L4A9Z1Z3 1794 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms