RNA–Protein interactions for RNA: ENST00000378389.5

PRDM16-202, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-202ENST00000378389 SIGLEC1Q9BZZ2 1709 aa31.68■■■□□ 2.66
PRDM16-202ENST00000378389 KIF14Q15058 1648 aa31.67■■■□□ 2.66
PRDM16-202ENST00000378389 LRRIQ1Q96JM4 1722 aa31.66■■■□□ 2.66
PRDM16-202ENST00000378389 PCF11O94913 1555 aaKnown RBP31.64■■■□□ 2.65
PRDM16-202ENST00000378389 RIMS1Q86UR5 1692 aaKnown RBP31.64■■■□□ 2.65
PRDM16-202ENST00000378389 EFCAB2Q5VUJ9 269 aa31.63■■■□□ 2.65
PRDM16-202ENST00000378389 EHMT2Q96KQ7 1210 aa31.62■■■□□ 2.65
PRDM16-202ENST00000378389 LMTK3Q96Q04 1460 aa31.61■■■□□ 2.65
PRDM16-202ENST00000378389 CLIP1P30622 1438 aa31.6■■■□□ 2.65
PRDM16-202ENST00000378389 CASKIN1Q8WXD9 1431 aa31.59■■■□□ 2.65
PRDM16-202ENST00000378389 ATP1B4Q9UN42 357 aaPredicted RBP31.58■■■□□ 2.65
PRDM16-202ENST00000378389 KDM5CP41229 1560 aa31.57■■■□□ 2.64
PRDM16-202ENST00000378389 ATP10AO60312 1499 aa31.57■■■□□ 2.64
PRDM16-202ENST00000378389 CCDC18Q5T9S5 1454 aa31.56■■■□□ 2.64
PRDM16-202ENST00000378389 ZNF518AQ6AHZ1 1483 aa31.56■■■□□ 2.64
PRDM16-202ENST00000378389 C9orf84Q5VXU9 1444 aa31.54■■■□□ 2.64
PRDM16-202ENST00000378389 ARHGAP5Q13017 1502 aa31.52■■■□□ 2.64
PRDM16-202ENST00000378389 ARHGEF12Q9NZN5 1544 aa31.52■■■□□ 2.64
PRDM16-202ENST00000378389 CDC42BPBQ9Y5S2 1711 aa31.5■■■□□ 2.63
PRDM16-202ENST00000378389 FER1L4A9Z1Z3 1794 aa31.49■■■□□ 2.63
PRDM16-202ENST00000378389 PREX2Q70Z35 1606 aa31.48■■■□□ 2.63
PRDM16-202ENST00000378389 FYCO1Q9BQS8 1478 aa31.47■■■□□ 2.63
PRDM16-202ENST00000378389 REREQ9P2R6 1566 aa31.47■■■□□ 2.63
PRDM16-202ENST00000378389 MLH3Q9UHC1 1453 aa31.43■■■□□ 2.62
PRDM16-202ENST00000378389 ABCC1P33527 1531 aa31.42■■■□□ 2.62
PRDM16-202ENST00000378389 DIP2CQ9Y2E4 1556 aa31.41■■■□□ 2.62
PRDM16-202ENST00000378389 AFAP1Q8N556 730 aa31.39■■■□□ 2.62
PRDM16-202ENST00000378389 CDC42BPAQ5VT25 1732 aa31.36■■■□□ 2.61
PRDM16-202ENST00000378389 ITSN2Q9NZM3 1697 aa31.36■■■□□ 2.61
PRDM16-202ENST00000378389 ABCA6Q8N139 1617 aa31.35■■■□□ 2.61
PRDM16-202ENST00000378389 MLECQ14165 292 aa31.34■■■□□ 2.61
PRDM16-202ENST00000378389 AGLP35573 1532 aa31.34■■■□□ 2.61
PRDM16-202ENST00000378389 TRAPPC8Q9Y2L5 1435 aa31.32■■■□□ 2.61
PRDM16-202ENST00000378389 FBXO41Q8TF61 875 aa31.32■■■□□ 2.6
PRDM16-202ENST00000378389 PREX1Q8TCU6 1659 aa31.28■■■□□ 2.6
PRDM16-202ENST00000378389 KIDINS220Q9ULH0 1771 aa31.26■■■□□ 2.59
PRDM16-202ENST00000378389 HSPA2P54652 639 aa31.25■■■□□ 2.59
PRDM16-202ENST00000378389 GPATCH8Q9UKJ3 1502 aaKnown RBP31.24■■■□□ 2.59
PRDM16-202ENST00000378389 SAMD9LQ8IVG5 1584 aa31.22■■■□□ 2.59
PRDM16-202ENST00000378389 SETD1BQ9UPS6 1966 aaKnown RBP31.22■■■□□ 2.59
PRDM16-202ENST00000378389 KIAA1107Q9UPP5 1409 aa31.17■■■□□ 2.58
PRDM16-202ENST00000378389 PLPPR3Q6T4P5 718 aa31.17■■■□□ 2.58
PRDM16-202ENST00000378389 SYCP2Q9BX26 1530 aa31.15■■■□□ 2.58
PRDM16-202ENST00000378389 CEBPAP49715 358 aaPredicted RBP31.14■■■□□ 2.58
PRDM16-202ENST00000378389 PLEKHH2Q8IVE3 1493 aa31.14■■■□□ 2.57
PRDM16-202ENST00000378389 C3P01024 1663 aa31.13■■■□□ 2.57
PRDM16-202ENST00000378389 MYT1LQ9UL68 1186 aa31.13■■■□□ 2.57
PRDM16-202ENST00000378389 CNTLNQ9NXG0 1405 aa31.11■■■□□ 2.57
PRDM16-202ENST00000378389 UHRF1BP1Q6BDS2 1440 aa31.1■■■□□ 2.57
PRDM16-202ENST00000378389 INO80Q9ULG1 1556 aaPredicted RBP31.09■■■□□ 2.57
PRDM16-202ENST00000378389 STRCQ7RTU9 1775 aa31.07■■■□□ 2.56
PRDM16-202ENST00000378389 PLXNC1O60486 1568 aa31.06■■■□□ 2.56
PRDM16-202ENST00000378389 ATP7AQ04656 1500 aa31.06■■■□□ 2.56
PRDM16-202ENST00000378389 MTUS2Q5JR59 1369 aa31.05■■■□□ 2.56
PRDM16-202ENST00000378389 CCNB3Q8WWL7 1395 aa31.05■■■□□ 2.56
PRDM16-202ENST00000378389 MROH2AA6NES4 1674 aa31.05■■■□□ 2.56
PRDM16-202ENST00000378389 SPAG9O60271 1321 aaKnown RBP31.04■■■□□ 2.56
PRDM16-202ENST00000378389 EHBP1L1Q8N3D4 1523 aa31.03■■■□□ 2.56
PRDM16-202ENST00000378389 CFDP1Q9UEE9 299 aaPredicted RBP31.03■■■□□ 2.56
PRDM16-202ENST00000378389 TIAM1Q13009 1591 aa31.02■■■□□ 2.56
PRDM16-202ENST00000378389 ZNF777Q9ULD5 760 aaPredicted RBP31.02■■■□□ 2.56
PRDM16-202ENST00000378389 HNRNPMP52272 730 aaKnown RBP eCLIP31.01■■■□□ 2.55
PRDM16-202ENST00000378389 CEP162Q5TB80 1403 aa31■■■□□ 2.55
PRDM16-202ENST00000378389 NPATQ14207 1427 aa30.98■■■□□ 2.55
PRDM16-202ENST00000378389 CERKQ8TCT0 537 aa30.97■■■□□ 2.55
PRDM16-202ENST00000378389 DMRT2Q9Y5R5 561 aa30.97■■■□□ 2.55
PRDM16-202ENST00000378389 A2MP01023 1474 aa30.96■■■□□ 2.55
PRDM16-202ENST00000378389 ESF1Q9H501 851 aaKnown RBP30.96■■■□□ 2.55
PRDM16-202ENST00000378389 MBD5Q9P267 1494 aa30.95■■■□□ 2.55
PRDM16-202ENST00000378389 SUPT6HQ7KZ85 1726 aaKnown RBP30.93■■■□□ 2.54
PRDM16-202ENST00000378389 PTPRTO14522 1441 aa30.93■■■□□ 2.54
PRDM16-202ENST00000378389 ADGBQ8N7X0 1667 aa30.91■■■□□ 2.54
PRDM16-202ENST00000378389 RTEL1-TNFRSF6BF6WH68 1400 aa30.9■■■□□ 2.54
PRDM16-202ENST00000378389 ZMYM3Q14202 1370 aa30.89■■■□□ 2.54
PRDM16-202ENST00000378389 NCOA1Q15788 1441 aa30.87■■■□□ 2.53
PRDM16-202ENST00000378389 PPP6R1Q9UPN7 881 aa30.86■■■□□ 2.53
PRDM16-202ENST00000378389 ZNF644Q9H582 1327 aaPredicted RBP30.85■■■□□ 2.53
PRDM16-202ENST00000378389 CLTCQ00610 1675 aaKnown RBP30.84■■■□□ 2.53
PRDM16-202ENST00000378389 NCOA2Q15596 1464 aa30.81■■■□□ 2.52
PRDM16-202ENST00000378389 ZNF142P52746 1687 aaPredicted RBP30.81■■■□□ 2.52
PRDM16-202ENST00000378389 PTPRKQ15262 1439 aa30.8■■■□□ 2.52
PRDM16-202ENST00000378389 DHX29Q7Z478 1369 aaKnown RBP30.77■■■□□ 2.52
PRDM16-202ENST00000378389 CCDC141Q6ZP82 1450 aa30.76■■■□□ 2.52
PRDM16-202ENST00000378389 MYO3AQ8NEV4 1616 aa30.76■■■□□ 2.51
PRDM16-202ENST00000378389 FAM135AQ9P2D6 1515 aa30.75■■■□□ 2.51
PRDM16-202ENST00000378389 CAMSAP1Q5T5Y3 1602 aa30.75■■■□□ 2.51
PRDM16-202ENST00000378389 LTBP4Q8N2S1 1624 aa30.75■■■□□ 2.51
PRDM16-202ENST00000378389 CAMSAP2Q08AD1 1489 aa30.75■■■□□ 2.51
PRDM16-202ENST00000378389 RSPH4AQ5TD94 716 aa30.74■■■□□ 2.51
PRDM16-202ENST00000378389 PLA2R1Q13018 1463 aa30.73■■■□□ 2.51
PRDM16-202ENST00000378389 ARHGEF5Q12774 1597 aa30.72■■■□□ 2.51
PRDM16-202ENST00000378389 VPS8Q8N3P4 1428 aa30.71■■■□□ 2.51
PRDM16-202ENST00000378389 CEP170BQ9Y4F5 1589 aaPredicted RBP30.71■■■□□ 2.51
PRDM16-202ENST00000378389 IQSEC2Q5JU85 1478 aa30.7■■■□□ 2.51
PRDM16-202ENST00000378389 GGT6Q6P531 493 aa30.7■■■□□ 2.51
PRDM16-202ENST00000378389 MAP3K1Q13233 1512 aa30.68■■■□□ 2.5
PRDM16-202ENST00000378389 TCOF1Q13428 1488 aaKnown RBP30.67■■■□□ 2.5
PRDM16-202ENST00000378389 LRRC9Q6ZRR7 1453 aa30.67■■■□□ 2.5
PRDM16-202ENST00000378389 KDM5DQ9BY66 1539 aa30.62■■■□□ 2.49
PRDM16-202ENST00000378389 A2ML1A8K2U0 1454 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms