RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 FRMPD1Q5SYB0 1578 aa32.45■■■□□ 2.79
TRIM13-203ENST00000378183 RAPGEF3O95398 923 aa32.44■■■□□ 2.78
TRIM13-203ENST00000378183 RICTORQ6R327 1708 aa32.43■■■□□ 2.78
TRIM13-203ENST00000378183 GPATCH8Q9UKJ3 1502 aaKnown RBP32.42■■■□□ 2.78
TRIM13-203ENST00000378183 LRRC9Q6ZRR7 1453 aa32.42■■■□□ 2.78
TRIM13-203ENST00000378183 ADGRL1O94910 1474 aa32.41■■■□□ 2.78
TRIM13-203ENST00000378183 DENND4BO75064 1496 aaPredicted RBP32.4■■■□□ 2.78
TRIM13-203ENST00000378183 KANK4Q5T7N3 995 aaPredicted RBP32.39■■■□□ 2.78
TRIM13-203ENST00000378183 SUPT6HQ7KZ85 1726 aaKnown RBP32.38■■■□□ 2.77
TRIM13-203ENST00000378183 SCAPERQ9BY12 1400 aa32.37■■■□□ 2.77
TRIM13-203ENST00000378183 CCNB3Q8WWL7 1395 aa32.35■■■□□ 2.77
TRIM13-203ENST00000378183 NCOA2Q15596 1464 aa32.35■■■□□ 2.77
TRIM13-203ENST00000378183 POGZQ7Z3K3 1410 aa32.3■■■□□ 2.76
TRIM13-203ENST00000378183 SAMD9LQ8IVG5 1584 aa32.29■■■□□ 2.76
TRIM13-203ENST00000378183 ITSN2Q9NZM3 1697 aa32.29■■■□□ 2.76
TRIM13-203ENST00000378183 ABCC1P33527 1531 aa32.29■■■□□ 2.76
TRIM13-203ENST00000378183 ARHGEF12Q9NZN5 1544 aa32.28■■■□□ 2.76
TRIM13-203ENST00000378183 APLP2Q06481 763 aa32.28■■■□□ 2.76
TRIM13-203ENST00000378183 ZMYM4Q5VZL5 1548 aa32.26■■■□□ 2.76
TRIM13-203ENST00000378183 CFDP1Q9UEE9 299 aaPredicted RBP32.26■■■□□ 2.75
TRIM13-203ENST00000378183 ZNF777Q9ULD5 760 aaPredicted RBP32.24■■■□□ 2.75
TRIM13-203ENST00000378183 TRAPPC8Q9Y2L5 1435 aa32.19■■■□□ 2.74
TRIM13-203ENST00000378183 ZNF518AQ6AHZ1 1483 aa32.19■■■□□ 2.74
TRIM13-203ENST00000378183 AFAP1Q8N556 730 aa32.19■■■□□ 2.74
TRIM13-203ENST00000378183 KDM5CP41229 1560 aa32.19■■■□□ 2.74
TRIM13-203ENST00000378183 ARHGEF40Q8TER5 1519 aa32.17■■■□□ 2.74
TRIM13-203ENST00000378183 SYCP2Q9BX26 1530 aa32.17■■■□□ 2.74
TRIM13-203ENST00000378183 ZNF644Q9H582 1327 aaPredicted RBP32.16■■■□□ 2.74
TRIM13-203ENST00000378183 MAGI2Q86UL8 1455 aa32.16■■■□□ 2.74
TRIM13-203ENST00000378183 YEATS2Q9ULM3 1422 aa32.15■■■□□ 2.74
TRIM13-203ENST00000378183 KIAA1107Q9UPP5 1409 aa32.14■■■□□ 2.74
TRIM13-203ENST00000378183 ZFYVE16Q7Z3T8 1539 aa32.14■■■□□ 2.74
TRIM13-203ENST00000378183 HNRNPMP52272 730 aaKnown RBP eCLIP32.13■■■□□ 2.73
TRIM13-203ENST00000378183 PLEKHH2Q8IVE3 1493 aa32.13■■■□□ 2.73
TRIM13-203ENST00000378183 KDM4FA0A1W2PPD8 638 aa32.09■■■□□ 2.73
TRIM13-203ENST00000378183 HECW2Q9P2P5 1572 aa32.09■■■□□ 2.73
TRIM13-203ENST00000378183 MYOM3Q5VTT5 1437 aa32.07■■■□□ 2.72
TRIM13-203ENST00000378183 CAMSAP2Q08AD1 1489 aa32.06■■■□□ 2.72
TRIM13-203ENST00000378183 MBD5Q9P267 1494 aa32.06■■■□□ 2.72
TRIM13-203ENST00000378183 MLH3Q9UHC1 1453 aa32.06■■■□□ 2.72
TRIM13-203ENST00000378183 SIGLEC1Q9BZZ2 1709 aa32.05■■■□□ 2.72
TRIM13-203ENST00000378183 KIDINS220Q9ULH0 1771 aa32.04■■■□□ 2.72
TRIM13-203ENST00000378183 MIA2Q96PC5 1412 aa32■■■□□ 2.71
TRIM13-203ENST00000378183 ABCA6Q8N139 1617 aa32■■■□□ 2.71
TRIM13-203ENST00000378183 DIP2CQ9Y2E4 1556 aa32■■■□□ 2.71
TRIM13-203ENST00000378183 ATP10AO60312 1499 aa32■■■□□ 2.71
TRIM13-203ENST00000378183 MYT1LQ9UL68 1186 aa31.97■■■□□ 2.71
TRIM13-203ENST00000378183 INO80Q9ULG1 1556 aaPredicted RBP31.95■■■□□ 2.71
TRIM13-203ENST00000378183 SPAG9O60271 1321 aaKnown RBP31.95■■■□□ 2.7
TRIM13-203ENST00000378183 C9orf84Q5VXU9 1444 aa31.94■■■□□ 2.7
TRIM13-203ENST00000378183 BCORL1Q5H9F3 1711 aa31.93■■■□□ 2.7
TRIM13-203ENST00000378183 ARHGEF5Q12774 1597 aa31.93■■■□□ 2.7
TRIM13-203ENST00000378183 ATP7AQ04656 1500 aa31.92■■■□□ 2.7
TRIM13-203ENST00000378183 CCDC141Q6ZP82 1450 aa31.91■■■□□ 2.7
TRIM13-203ENST00000378183 PTPN23Q9H3S7 1636 aa31.91■■■□□ 2.7
TRIM13-203ENST00000378183 ARID4BQ4LE39 1312 aaPredicted RBP31.91■■■□□ 2.7
TRIM13-203ENST00000378183 FGD6Q6ZV73 1430 aa31.9■■■□□ 2.7
TRIM13-203ENST00000378183 REREQ9P2R6 1566 aa31.9■■■□□ 2.7
TRIM13-203ENST00000378183 ADAMTSL3P82987 1691 aa31.89■■■□□ 2.7
TRIM13-203ENST00000378183 RSPH4AQ5TD94 716 aa31.88■■■□□ 2.69
TRIM13-203ENST00000378183 PPARGC1BQ86YN6 1023 aaKnown RBP31.88■■■□□ 2.69
TRIM13-203ENST00000378183 AEBP2Q6ZN18 517 aaPredicted RBP31.85■■■□□ 2.69
TRIM13-203ENST00000378183 TCOF1Q13428 1488 aaKnown RBP31.84■■■□□ 2.69
TRIM13-203ENST00000378183 RTEL1-TNFRSF6BF6WH68 1400 aa31.83■■■□□ 2.69
TRIM13-203ENST00000378183 MADDQ8WXG6 1647 aa31.78■■■□□ 2.68
TRIM13-203ENST00000378183 ADGBQ8N7X0 1667 aa31.78■■■□□ 2.68
TRIM13-203ENST00000378183 AGLP35573 1532 aa31.78■■■□□ 2.68
TRIM13-203ENST00000378183 MAST1Q9Y2H9 1570 aa31.77■■■□□ 2.68
TRIM13-203ENST00000378183 PLXNC1O60486 1568 aa31.76■■■□□ 2.67
TRIM13-203ENST00000378183 TSPY4P0CV99 314 aa31.75■■■□□ 2.67
TRIM13-203ENST00000378183 TSPY10P0CW01 314 aa31.75■■■□□ 2.67
TRIM13-203ENST00000378183 MLECQ14165 292 aa31.75■■■□□ 2.67
TRIM13-203ENST00000378183 A2MP01023 1474 aa31.75■■■□□ 2.67
TRIM13-203ENST00000378183 CROCC2H7BZ55 1655 aa31.74■■■□□ 2.67
TRIM13-203ENST00000378183 ABCC5O15440 1437 aa31.74■■■□□ 2.67
TRIM13-203ENST00000378183 DNMT1P26358 1616 aaKnown RBP31.73■■■□□ 2.67
TRIM13-203ENST00000378183 RIMS1Q86UR5 1692 aaKnown RBP31.7■■■□□ 2.66
TRIM13-203ENST00000378183 FER1L4A9Z1Z3 1794 aa31.69■■■□□ 2.66
TRIM13-203ENST00000378183 DAPK1P53355 1430 aa31.69■■■□□ 2.66
TRIM13-203ENST00000378183 PTPRMP28827 1452 aa31.66■■■□□ 2.66
TRIM13-203ENST00000378183 DHX29Q7Z478 1369 aaKnown RBP31.66■■■□□ 2.66
TRIM13-203ENST00000378183 SHANK2Q9UPX8 1470 aa31.65■■■□□ 2.66
TRIM13-203ENST00000378183 FAM50AQ14320 339 aaKnown RBP31.65■■■□□ 2.66
TRIM13-203ENST00000378183 CHIC2Q9UKJ5 165 aa31.54■■■□□ 2.64
TRIM13-203ENST00000378183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.52■■■□□ 2.64
TRIM13-203ENST00000378183 PTPRKQ15262 1439 aa31.51■■■□□ 2.64
TRIM13-203ENST00000378183 RRBP1Q9P2E9 1410 aaKnown RBP31.51■■■□□ 2.64
TRIM13-203ENST00000378183 DUOX2Q9NRD8 1548 aa31.5■■■□□ 2.63
TRIM13-203ENST00000378183 KIF3BO15066 747 aa31.5■■■□□ 2.63
TRIM13-203ENST00000378183 GGT6Q6P531 493 aa31.5■■■□□ 2.63
TRIM13-203ENST00000378183 RRP7BPQ9NSQ0 103 aa31.5■■■□□ 2.63
TRIM13-203ENST00000378183 KIF15Q9NS87 1388 aa31.49■■■□□ 2.63
TRIM13-203ENST00000378183 ADGRL2O95490 1459 aa31.48■■■□□ 2.63
TRIM13-203ENST00000378183 NCOA1Q15788 1441 aa31.48■■■□□ 2.63
TRIM13-203ENST00000378183 EIF2AK4Q9P2K8 1649 aaKnown RBP31.47■■■□□ 2.63
TRIM13-203ENST00000378183 ANKRD30AQ9BXX3 1397 aa31.46■■■□□ 2.63
TRIM13-203ENST00000378183 CLTCQ00610 1675 aaKnown RBP31.46■■■□□ 2.63
TRIM13-203ENST00000378183 PLPPR3Q6T4P5 718 aa31.45■■■□□ 2.63
TRIM13-203ENST00000378183 C3P01024 1663 aa31.44■■■□□ 2.62
TRIM13-203ENST00000378183 CEBPAP49715 358 aaPredicted RBP31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms