RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 FAM69CQ0P6D2 419 aa21.83■■□□□ 1.09
CCHCR1-201ENST00000376266 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.09
CCHCR1-201ENST00000376266 DIP2BQ9P265 1576 aa21.8■■□□□ 1.08
CCHCR1-201ENST00000376266 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
CCHCR1-201ENST00000376266 ABCA9Q8IUA7 1624 aa21.79■■□□□ 1.08
CCHCR1-201ENST00000376266 BCL11AQ9H165 835 aa21.78■■□□□ 1.08
CCHCR1-201ENST00000376266 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
CCHCR1-201ENST00000376266 TSHZ2Q9NRE2 1034 aa21.76■■□□□ 1.07
CCHCR1-201ENST00000376266 CDC42BPAQ5VT25 1732 aa21.76■■□□□ 1.07
CCHCR1-201ENST00000376266 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
CCHCR1-201ENST00000376266 CD109Q6YHK3 1445 aa21.75■■□□□ 1.07
CCHCR1-201ENST00000376266 GLI2P10070 1586 aa21.75■■□□□ 1.07
CCHCR1-201ENST00000376266 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
CCHCR1-201ENST00000376266 PLCH2O75038 1416 aa21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 KIF13AQ9H1H9 1805 aa21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 MYO5CQ9NQX4 1742 aa21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 ZNF777Q9ULD5 760 aaPredicted RBP21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 FGD6Q6ZV73 1430 aa21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 CDC42BPBQ9Y5S2 1711 aa21.71■■□□□ 1.07
CCHCR1-201ENST00000376266 PREX2Q70Z35 1606 aa21.71■■□□□ 1.07
CCHCR1-201ENST00000376266 ITSN2Q9NZM3 1697 aa21.71■■□□□ 1.07
CCHCR1-201ENST00000376266 ZNF644Q9H582 1327 aaPredicted RBP21.71■■□□□ 1.07
CCHCR1-201ENST00000376266 ARHGAP5Q13017 1502 aa21.7■■□□□ 1.06
CCHCR1-201ENST00000376266 MAP3K4Q9Y6R4 1608 aa21.7■■□□□ 1.06
CCHCR1-201ENST00000376266 FAM50AQ14320 339 aaKnown RBP21.68■■□□□ 1.06
CCHCR1-201ENST00000376266 MIA2Q96PC5 1412 aa21.68■■□□□ 1.06
CCHCR1-201ENST00000376266 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
CCHCR1-201ENST00000376266 EFCAB2Q5VUJ9 269 aa21.67■■□□□ 1.06
CCHCR1-201ENST00000376266 TSPOAP1O95153 1857 aa21.65■■□□□ 1.06
CCHCR1-201ENST00000376266 FANCAO15360 1455 aa21.65■■□□□ 1.06
CCHCR1-201ENST00000376266 PTPN23Q9H3S7 1636 aa21.65■■□□□ 1.06
CCHCR1-201ENST00000376266 ARAP3Q8WWN8 1544 aa21.64■■□□□ 1.05
CCHCR1-201ENST00000376266 CAMSAP2Q08AD1 1489 aa21.61■■□□□ 1.05
CCHCR1-201ENST00000376266 SAMD9LQ8IVG5 1584 aa21.61■■□□□ 1.05
CCHCR1-201ENST00000376266 TCOF1Q13428 1488 aaKnown RBP21.6■■□□□ 1.05
CCHCR1-201ENST00000376266 PPRC1Q5VV67 1664 aaKnown RBP21.59■■□□□ 1.05
CCHCR1-201ENST00000376266 HNRNPMP52272 730 aaKnown RBP eCLIP21.59■■□□□ 1.05
CCHCR1-201ENST00000376266 ITGAEP38570 1179 aa21.59■■□□□ 1.05
CCHCR1-201ENST00000376266 AKNAQ7Z591 1439 aa21.58■■□□□ 1.04
CCHCR1-201ENST00000376266 ARHGEF12Q9NZN5 1544 aa21.55■■□□□ 1.04
CCHCR1-201ENST00000376266 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
CCHCR1-201ENST00000376266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.043e-6■■■■□ 26.4
CCHCR1-201ENST00000376266 SYCP2Q9BX26 1530 aa21.54■■□□□ 1.04
CCHCR1-201ENST00000376266 ADGRL1O94910 1474 aa21.54■■□□□ 1.04
CCHCR1-201ENST00000376266 NEO1Q92859 1461 aa21.54■■□□□ 1.04
CCHCR1-201ENST00000376266 ABCC1P33527 1531 aa21.53■■□□□ 1.04
CCHCR1-201ENST00000376266 SCAPERQ9BY12 1400 aa21.53■■□□□ 1.04
CCHCR1-201ENST00000376266 CFAP74Q9C0B2 1584 aa21.53■■□□□ 1.04
CCHCR1-201ENST00000376266 MBD5Q9P267 1494 aa21.52■■□□□ 1.04
CCHCR1-201ENST00000376266 KIAA1107Q9UPP5 1409 aa21.52■■□□□ 1.04
CCHCR1-201ENST00000376266 PLEKHH2Q8IVE3 1493 aa21.52■■□□□ 1.04
CCHCR1-201ENST00000376266 TRAPPC8Q9Y2L5 1435 aa21.49■■□□□ 1.03
CCHCR1-201ENST00000376266 AFAP1Q8N556 730 aa21.49■■□□□ 1.03
CCHCR1-201ENST00000376266 ABCC5O15440 1437 aa21.49■■□□□ 1.03
CCHCR1-201ENST00000376266 DAPK1P53355 1430 aa21.48■■□□□ 1.03
CCHCR1-201ENST00000376266 PTPRKQ15262 1439 aa21.48■■□□□ 1.03
CCHCR1-201ENST00000376266 RAPGEF3O95398 923 aa21.47■■□□□ 1.03
CCHCR1-201ENST00000376266 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
CCHCR1-201ENST00000376266 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
CCHCR1-201ENST00000376266 RSPH4AQ5TD94 716 aa21.45■■□□□ 1.02
CCHCR1-201ENST00000376266 ARHGEF5Q12774 1597 aa21.45■■□□□ 1.02
CCHCR1-201ENST00000376266 CCDC141Q6ZP82 1450 aa21.45■■□□□ 1.02
CCHCR1-201ENST00000376266 DENND4BO75064 1496 aaPredicted RBP21.43■■□□□ 1.02
CCHCR1-201ENST00000376266 TSPY4P0CV99 314 aa21.43■■□□□ 1.02
CCHCR1-201ENST00000376266 TSPY10P0CW01 314 aa21.43■■□□□ 1.02
CCHCR1-201ENST00000376266 COL17A1Q9UMD9 1497 aaPredicted RBP21.43■■□□□ 1.02
CCHCR1-201ENST00000376266 POGZQ7Z3K3 1410 aa21.42■■□□□ 1.02
CCHCR1-201ENST00000376266 ZNF518AQ6AHZ1 1483 aa21.4■■□□□ 1.02
CCHCR1-201ENST00000376266 C9orf84Q5VXU9 1444 aa21.39■■□□□ 1.01
CCHCR1-201ENST00000376266 BCANQ96GW7 911 aa21.39■■□□□ 1.01
CCHCR1-201ENST00000376266 CROCC2H7BZ55 1655 aa21.38■■□□□ 1.01
CCHCR1-201ENST00000376266 SPAG9O60271 1321 aaKnown RBP21.38■■□□□ 1.01
CCHCR1-201ENST00000376266 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
CCHCR1-201ENST00000376266 RICTORQ6R327 1708 aa21.36■■□□□ 1.01
CCHCR1-201ENST00000376266 RRP7BPQ9NSQ0 103 aa21.36■■□□□ 1.01
CCHCR1-201ENST00000376266 FRMPD1Q5SYB0 1578 aa21.35■■□□□ 1.01
CCHCR1-201ENST00000376266 SHANK2Q9UPX8 1470 aa21.35■■□□□ 1.01
CCHCR1-201ENST00000376266 KDM5CP41229 1560 aa21.34■■□□□ 1.01
CCHCR1-201ENST00000376266 NCOA1Q15788 1441 aa21.32■■□□□ 1
CCHCR1-201ENST00000376266 MAST1Q9Y2H9 1570 aa21.31■■□□□ 1
CCHCR1-201ENST00000376266 KDM6BO15054 1643 aa21.31■■□□□ 1
CCHCR1-201ENST00000376266 DHX57Q6P158 1386 aaKnown RBP21.31■■□□□ 1
CCHCR1-201ENST00000376266 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
CCHCR1-201ENST00000376266 ZFYVE16Q7Z3T8 1539 aa21.31■■□□□ 1
CCHCR1-201ENST00000376266 ATP7AQ04656 1500 aa21.3■■□□□ 1
CCHCR1-201ENST00000376266 ROCK1Q13464 1354 aa21.3■■□□□ 1
CCHCR1-201ENST00000376266 FKBP8Q14318 412 aa21.3■■□□□ 1
CCHCR1-201ENST00000376266 ADGRL2O95490 1459 aa21.3■■□□□ 1
CCHCR1-201ENST00000376266 RTEL1-TNFRSF6BF6WH68 1400 aa21.29■■□□□ 1
CCHCR1-201ENST00000376266 MLH3Q9UHC1 1453 aa21.29■■□□□ 1
CCHCR1-201ENST00000376266 INO80Q9ULG1 1556 aaPredicted RBP21.29■■□□□ 1
CCHCR1-201ENST00000376266 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
CCHCR1-201ENST00000376266 HECW2Q9P2P5 1572 aa21.28■■□□□ 1
CCHCR1-201ENST00000376266 KIDINS220Q9ULH0 1771 aa21.28■■□□□ 1
CCHCR1-201ENST00000376266 KIF15Q9NS87 1388 aa21.27■■□□□ 1
CCHCR1-201ENST00000376266 RBM19Q9Y4C8 960 aaKnown RBP21.26■□□□□ 0.99
CCHCR1-201ENST00000376266 ZMYM4Q5VZL5 1548 aa21.26■□□□□ 0.99
CCHCR1-201ENST00000376266 NAIPQ13075 1403 aa21.26■□□□□ 0.99
CCHCR1-201ENST00000376266 YEATS2Q9ULM3 1422 aa21.26■□□□□ 0.99
CCHCR1-201ENST00000376266 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms