RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 FAM69CQ0P6D2 419 aa21.83■■□□□ 1.09
CCHCR1-201ENST00000376266 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.09
CCHCR1-201ENST00000376266 DIP2BQ9P265 1576 aa21.8■■□□□ 1.08
CCHCR1-201ENST00000376266 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
CCHCR1-201ENST00000376266 ABCA9Q8IUA7 1624 aa21.79■■□□□ 1.08
CCHCR1-201ENST00000376266 BCL11AQ9H165 835 aa21.78■■□□□ 1.08
CCHCR1-201ENST00000376266 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
CCHCR1-201ENST00000376266 TSHZ2Q9NRE2 1034 aa21.76■■□□□ 1.07
CCHCR1-201ENST00000376266 CDC42BPAQ5VT25 1732 aa21.76■■□□□ 1.07
CCHCR1-201ENST00000376266 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
CCHCR1-201ENST00000376266 CD109Q6YHK3 1445 aa21.75■■□□□ 1.07
CCHCR1-201ENST00000376266 GLI2P10070 1586 aa21.75■■□□□ 1.07
CCHCR1-201ENST00000376266 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
CCHCR1-201ENST00000376266 PLCH2O75038 1416 aa21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 KIF13AQ9H1H9 1805 aa21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 MYO5CQ9NQX4 1742 aa21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 ZNF777Q9ULD5 760 aaPredicted RBP21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 FGD6Q6ZV73 1430 aa21.73■■□□□ 1.07
CCHCR1-201ENST00000376266 CDC42BPBQ9Y5S2 1711 aa21.71■■□□□ 1.07
CCHCR1-201ENST00000376266 PREX2Q70Z35 1606 aa21.71■■□□□ 1.07
CCHCR1-201ENST00000376266 ITSN2Q9NZM3 1697 aa21.71■■□□□ 1.07
CCHCR1-201ENST00000376266 ZNF644Q9H582 1327 aaPredicted RBP21.71■■□□□ 1.07
CCHCR1-201ENST00000376266 ARHGAP5Q13017 1502 aa21.7■■□□□ 1.06
CCHCR1-201ENST00000376266 MAP3K4Q9Y6R4 1608 aa21.7■■□□□ 1.06
CCHCR1-201ENST00000376266 FAM50AQ14320 339 aaKnown RBP21.68■■□□□ 1.06
CCHCR1-201ENST00000376266 MIA2Q96PC5 1412 aa21.68■■□□□ 1.06
CCHCR1-201ENST00000376266 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
CCHCR1-201ENST00000376266 EFCAB2Q5VUJ9 269 aa21.67■■□□□ 1.06
CCHCR1-201ENST00000376266 TSPOAP1O95153 1857 aa21.65■■□□□ 1.06
CCHCR1-201ENST00000376266 FANCAO15360 1455 aa21.65■■□□□ 1.06
CCHCR1-201ENST00000376266 PTPN23Q9H3S7 1636 aa21.65■■□□□ 1.06
CCHCR1-201ENST00000376266 ARAP3Q8WWN8 1544 aa21.64■■□□□ 1.05
CCHCR1-201ENST00000376266 CAMSAP2Q08AD1 1489 aa21.61■■□□□ 1.05
CCHCR1-201ENST00000376266 SAMD9LQ8IVG5 1584 aa21.61■■□□□ 1.05
CCHCR1-201ENST00000376266 TCOF1Q13428 1488 aaKnown RBP21.6■■□□□ 1.05
CCHCR1-201ENST00000376266 PPRC1Q5VV67 1664 aaKnown RBP21.59■■□□□ 1.05
CCHCR1-201ENST00000376266 HNRNPMP52272 730 aaKnown RBP eCLIP21.59■■□□□ 1.05
CCHCR1-201ENST00000376266 ITGAEP38570 1179 aa21.59■■□□□ 1.05
CCHCR1-201ENST00000376266 AKNAQ7Z591 1439 aa21.58■■□□□ 1.04
CCHCR1-201ENST00000376266 ARHGEF12Q9NZN5 1544 aa21.55■■□□□ 1.04
CCHCR1-201ENST00000376266 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
CCHCR1-201ENST00000376266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.043e-6■■■■□ 26.4
CCHCR1-201ENST00000376266 SYCP2Q9BX26 1530 aa21.54■■□□□ 1.04
CCHCR1-201ENST00000376266 ADGRL1O94910 1474 aa21.54■■□□□ 1.04
CCHCR1-201ENST00000376266 NEO1Q92859 1461 aa21.54■■□□□ 1.04
CCHCR1-201ENST00000376266 ABCC1P33527 1531 aa21.53■■□□□ 1.04
CCHCR1-201ENST00000376266 SCAPERQ9BY12 1400 aa21.53■■□□□ 1.04
CCHCR1-201ENST00000376266 CFAP74Q9C0B2 1584 aa21.53■■□□□ 1.04
CCHCR1-201ENST00000376266 MBD5Q9P267 1494 aa21.52■■□□□ 1.04
CCHCR1-201ENST00000376266 KIAA1107Q9UPP5 1409 aa21.52■■□□□ 1.04
CCHCR1-201ENST00000376266 PLEKHH2Q8IVE3 1493 aa21.52■■□□□ 1.04
CCHCR1-201ENST00000376266 TRAPPC8Q9Y2L5 1435 aa21.49■■□□□ 1.03
CCHCR1-201ENST00000376266 AFAP1Q8N556 730 aa21.49■■□□□ 1.03
CCHCR1-201ENST00000376266 ABCC5O15440 1437 aa21.49■■□□□ 1.03
CCHCR1-201ENST00000376266 DAPK1P53355 1430 aa21.48■■□□□ 1.03
CCHCR1-201ENST00000376266 PTPRKQ15262 1439 aa21.48■■□□□ 1.03
CCHCR1-201ENST00000376266 RAPGEF3O95398 923 aa21.47■■□□□ 1.03
CCHCR1-201ENST00000376266 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
CCHCR1-201ENST00000376266 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
CCHCR1-201ENST00000376266 RSPH4AQ5TD94 716 aa21.45■■□□□ 1.02
CCHCR1-201ENST00000376266 ARHGEF5Q12774 1597 aa21.45■■□□□ 1.02
CCHCR1-201ENST00000376266 CCDC141Q6ZP82 1450 aa21.45■■□□□ 1.02
CCHCR1-201ENST00000376266 DENND4BO75064 1496 aaPredicted RBP21.43■■□□□ 1.02
CCHCR1-201ENST00000376266 TSPY4P0CV99 314 aa21.43■■□□□ 1.02
CCHCR1-201ENST00000376266 TSPY10P0CW01 314 aa21.43■■□□□ 1.02
CCHCR1-201ENST00000376266 COL17A1Q9UMD9 1497 aaPredicted RBP21.43■■□□□ 1.02
CCHCR1-201ENST00000376266 POGZQ7Z3K3 1410 aa21.42■■□□□ 1.02
CCHCR1-201ENST00000376266 ZNF518AQ6AHZ1 1483 aa21.4■■□□□ 1.02
CCHCR1-201ENST00000376266 C9orf84Q5VXU9 1444 aa21.39■■□□□ 1.01
CCHCR1-201ENST00000376266 BCANQ96GW7 911 aa21.39■■□□□ 1.01
CCHCR1-201ENST00000376266 CROCC2H7BZ55 1655 aa21.38■■□□□ 1.01
CCHCR1-201ENST00000376266 SPAG9O60271 1321 aaKnown RBP21.38■■□□□ 1.01
CCHCR1-201ENST00000376266 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
CCHCR1-201ENST00000376266 RICTORQ6R327 1708 aa21.36■■□□□ 1.01
CCHCR1-201ENST00000376266 RRP7BPQ9NSQ0 103 aa21.36■■□□□ 1.01
CCHCR1-201ENST00000376266 FRMPD1Q5SYB0 1578 aa21.35■■□□□ 1.01
CCHCR1-201ENST00000376266 SHANK2Q9UPX8 1470 aa21.35■■□□□ 1.01
CCHCR1-201ENST00000376266 KDM5CP41229 1560 aa21.34■■□□□ 1.01
CCHCR1-201ENST00000376266 NCOA1Q15788 1441 aa21.32■■□□□ 1
CCHCR1-201ENST00000376266 MAST1Q9Y2H9 1570 aa21.31■■□□□ 1
CCHCR1-201ENST00000376266 KDM6BO15054 1643 aa21.31■■□□□ 1
CCHCR1-201ENST00000376266 DHX57Q6P158 1386 aaKnown RBP21.31■■□□□ 1
CCHCR1-201ENST00000376266 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
CCHCR1-201ENST00000376266 ZFYVE16Q7Z3T8 1539 aa21.31■■□□□ 1
CCHCR1-201ENST00000376266 ATP7AQ04656 1500 aa21.3■■□□□ 1
CCHCR1-201ENST00000376266 ROCK1Q13464 1354 aa21.3■■□□□ 1
CCHCR1-201ENST00000376266 FKBP8Q14318 412 aa21.3■■□□□ 1
CCHCR1-201ENST00000376266 ADGRL2O95490 1459 aa21.3■■□□□ 1
CCHCR1-201ENST00000376266 RTEL1-TNFRSF6BF6WH68 1400 aa21.29■■□□□ 1
CCHCR1-201ENST00000376266 MLH3Q9UHC1 1453 aa21.29■■□□□ 1
CCHCR1-201ENST00000376266 INO80Q9ULG1 1556 aaPredicted RBP21.29■■□□□ 1
CCHCR1-201ENST00000376266 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
CCHCR1-201ENST00000376266 HECW2Q9P2P5 1572 aa21.28■■□□□ 1
CCHCR1-201ENST00000376266 KIDINS220Q9ULH0 1771 aa21.28■■□□□ 1
CCHCR1-201ENST00000376266 KIF15Q9NS87 1388 aa21.27■■□□□ 1
CCHCR1-201ENST00000376266 RBM19Q9Y4C8 960 aaKnown RBP21.26■□□□□ 0.99
CCHCR1-201ENST00000376266 ZMYM4Q5VZL5 1548 aa21.26■□□□□ 0.99
CCHCR1-201ENST00000376266 NAIPQ13075 1403 aa21.26■□□□□ 0.99
CCHCR1-201ENST00000376266 YEATS2Q9ULM3 1422 aa21.26■□□□□ 0.99
CCHCR1-201ENST00000376266 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms