RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 PREX2Q70Z35 1606 aa34.48■■■■□ 3.11
NINJ1-201ENST00000375446 EHBP1L1Q8N3D4 1523 aa34.47■■■■□ 3.11
NINJ1-201ENST00000375446 KDM4FA0A1W2PPD8 638 aa34.47■■■■□ 3.11
NINJ1-201ENST00000375446 RICTORQ6R327 1708 aa34.47■■■■□ 3.11
NINJ1-201ENST00000375446 CDC42BPBQ9Y5S2 1711 aa34.45■■■■□ 3.11
NINJ1-201ENST00000375446 POGZQ7Z3K3 1410 aa34.45■■■■□ 3.11
NINJ1-201ENST00000375446 GPATCH8Q9UKJ3 1502 aaKnown RBP34.44■■■■□ 3.1
NINJ1-201ENST00000375446 TIAM1Q13009 1591 aa34.43■■■■□ 3.1
NINJ1-201ENST00000375446 CCNB3Q8WWL7 1395 aa34.42■■■■□ 3.1
NINJ1-201ENST00000375446 CDC42BPAQ5VT25 1732 aa34.41■■■■□ 3.1
NINJ1-201ENST00000375446 ZMYM4Q5VZL5 1548 aa34.4■■■■□ 3.1
NINJ1-201ENST00000375446 CFDP1Q9UEE9 299 aaPredicted RBP34.35■■■■□ 3.09
NINJ1-201ENST00000375446 MAGI2Q86UL8 1455 aa34.34■■■■□ 3.09
NINJ1-201ENST00000375446 ZNF777Q9ULD5 760 aaPredicted RBP34.34■■■■□ 3.09
NINJ1-201ENST00000375446 MAP3K1Q13233 1512 aa34.34■■■■□ 3.09
NINJ1-201ENST00000375446 ZNF518AQ6AHZ1 1483 aa34.33■■■■□ 3.09
NINJ1-201ENST00000375446 ABCC1P33527 1531 aa34.33■■■■□ 3.09
NINJ1-201ENST00000375446 ARHGEF40Q8TER5 1519 aa34.33■■■■□ 3.09
NINJ1-201ENST00000375446 AFAP1Q8N556 730 aa34.32■■■■□ 3.08
NINJ1-201ENST00000375446 LRRC9Q6ZRR7 1453 aa34.32■■■■□ 3.08
NINJ1-201ENST00000375446 ZFYVE16Q7Z3T8 1539 aa34.3■■■■□ 3.08
NINJ1-201ENST00000375446 ARHGEF12Q9NZN5 1544 aa34.3■■■■□ 3.08
NINJ1-201ENST00000375446 YEATS2Q9ULM3 1422 aa34.3■■■■□ 3.08
NINJ1-201ENST00000375446 NCOA2Q15596 1464 aa34.29■■■■□ 3.08
NINJ1-201ENST00000375446 TRAPPC8Q9Y2L5 1435 aa34.27■■■■□ 3.08
NINJ1-201ENST00000375446 KANK4Q5T7N3 995 aaPredicted RBP34.26■■■■□ 3.08
NINJ1-201ENST00000375446 SAMD9LQ8IVG5 1584 aa34.26■■■■□ 3.07
NINJ1-201ENST00000375446 SUPT6HQ7KZ85 1726 aaKnown RBP34.26■■■■□ 3.07
NINJ1-201ENST00000375446 APLP2Q06481 763 aa34.25■■■■□ 3.07
NINJ1-201ENST00000375446 KDM5CP41229 1560 aa34.24■■■■□ 3.07
NINJ1-201ENST00000375446 ARID4BQ4LE39 1312 aaPredicted RBP34.22■■■■□ 3.07
NINJ1-201ENST00000375446 ITSN2Q9NZM3 1697 aa34.22■■■■□ 3.07
NINJ1-201ENST00000375446 PLEKHH2Q8IVE3 1493 aa34.21■■■■□ 3.07
NINJ1-201ENST00000375446 KIAA1107Q9UPP5 1409 aa34.21■■■■□ 3.07
NINJ1-201ENST00000375446 HNRNPMP52272 730 aaKnown RBP eCLIP34.2■■■■□ 3.07
NINJ1-201ENST00000375446 MYT1LQ9UL68 1186 aa34.19■■■■□ 3.06
NINJ1-201ENST00000375446 SYCP2Q9BX26 1530 aa34.19■■■■□ 3.06
NINJ1-201ENST00000375446 ZNF644Q9H582 1327 aaPredicted RBP34.17■■■■□ 3.06
NINJ1-201ENST00000375446 MLH3Q9UHC1 1453 aa34.17■■■■□ 3.06
NINJ1-201ENST00000375446 ATP10AO60312 1499 aa34.16■■■■□ 3.06
NINJ1-201ENST00000375446 HECW2Q9P2P5 1572 aa34.15■■■■□ 3.06
NINJ1-201ENST00000375446 C9orf84Q5VXU9 1444 aa34.11■■■■□ 3.05
NINJ1-201ENST00000375446 SPAG9O60271 1321 aaKnown RBP34.07■■■■□ 3.05
NINJ1-201ENST00000375446 BCORL1Q5H9F3 1711 aa34.06■■■■□ 3.04
NINJ1-201ENST00000375446 DIP2CQ9Y2E4 1556 aa34.06■■■■□ 3.04
NINJ1-201ENST00000375446 MBD5Q9P267 1494 aa34.05■■■■□ 3.04
NINJ1-201ENST00000375446 ADAMTSL3P82987 1691 aa34.04■■■■□ 3.04
NINJ1-201ENST00000375446 SIGLEC1Q9BZZ2 1709 aa34.04■■■■□ 3.04
NINJ1-201ENST00000375446 CAMSAP2Q08AD1 1489 aa34.02■■■■□ 3.04
NINJ1-201ENST00000375446 ABCA6Q8N139 1617 aa34.02■■■■□ 3.04
NINJ1-201ENST00000375446 KIDINS220Q9ULH0 1771 aa34■■■■□ 3.03
NINJ1-201ENST00000375446 MYOM3Q5VTT5 1437 aa34■■■■□ 3.03
NINJ1-201ENST00000375446 MLECQ14165 292 aa33.98■■■■□ 3.03
NINJ1-201ENST00000375446 REREQ9P2R6 1566 aa33.98■■■■□ 3.03
NINJ1-201ENST00000375446 MIA2Q96PC5 1412 aa33.96■■■■□ 3.03
NINJ1-201ENST00000375446 ATP7AQ04656 1500 aa33.95■■■■□ 3.03
NINJ1-201ENST00000375446 RSPH4AQ5TD94 716 aa33.94■■■■□ 3.02
NINJ1-201ENST00000375446 MADDQ8WXG6 1647 aa33.93■■■■□ 3.02
NINJ1-201ENST00000375446 CCDC141Q6ZP82 1450 aa33.93■■■■□ 3.02
NINJ1-201ENST00000375446 INO80Q9ULG1 1556 aaPredicted RBP33.93■■■■□ 3.02
NINJ1-201ENST00000375446 PTPRMP28827 1452 aa33.92■■■■□ 3.02
NINJ1-201ENST00000375446 AGLP35573 1532 aa33.89■■■■□ 3.02
NINJ1-201ENST00000375446 RTEL1-TNFRSF6BF6WH68 1400 aa33.87■■■■□ 3.01
NINJ1-201ENST00000375446 ARHGEF5Q12774 1597 aa33.86■■■■□ 3.01
NINJ1-201ENST00000375446 A2MP01023 1474 aa33.82■■■■□ 3.01
NINJ1-201ENST00000375446 TSPY4P0CV99 314 aa33.82■■■■□ 3
NINJ1-201ENST00000375446 TSPY10P0CW01 314 aa33.82■■■■□ 3
NINJ1-201ENST00000375446 RIMS1Q86UR5 1692 aaKnown RBP33.82■■■■□ 3
NINJ1-201ENST00000375446 FGD6Q6ZV73 1430 aa33.79■■■■□ 3
NINJ1-201ENST00000375446 FER1L4A9Z1Z3 1794 aa33.76■■■■□ 3
NINJ1-201ENST00000375446 PLXNC1O60486 1568 aa33.76■■■□□ 2.99
NINJ1-201ENST00000375446 PTPN23Q9H3S7 1636 aa33.75■■■□□ 2.99
NINJ1-201ENST00000375446 ADGBQ8N7X0 1667 aa33.73■■■□□ 2.99
NINJ1-201ENST00000375446 DHX29Q7Z478 1369 aaKnown RBP33.72■■■□□ 2.99
NINJ1-201ENST00000375446 TCOF1Q13428 1488 aaKnown RBP33.71■■■□□ 2.99
NINJ1-201ENST00000375446 PLPPR3Q6T4P5 718 aa33.71■■■□□ 2.99
NINJ1-201ENST00000375446 ESF1Q9H501 851 aaKnown RBP33.68■■■□□ 2.98
NINJ1-201ENST00000375446 MAST1Q9Y2H9 1570 aa33.68■■■□□ 2.98
NINJ1-201ENST00000375446 ABCC5O15440 1437 aa33.65■■■□□ 2.98
NINJ1-201ENST00000375446 PPARGC1BQ86YN6 1023 aaKnown RBP33.64■■■□□ 2.98
NINJ1-201ENST00000375446 CEBPAP49715 358 aaPredicted RBP33.62■■■□□ 2.97
NINJ1-201ENST00000375446 GGT6Q6P531 493 aa33.62■■■□□ 2.97
NINJ1-201ENST00000375446 DAPK1P53355 1430 aa33.61■■■□□ 2.97
NINJ1-201ENST00000375446 CNTLNQ9NXG0 1405 aa33.61■■■□□ 2.97
NINJ1-201ENST00000375446 SHANK2Q9UPX8 1470 aa33.59■■■□□ 2.97
NINJ1-201ENST00000375446 FAM50AQ14320 339 aaKnown RBP33.59■■■□□ 2.97
NINJ1-201ENST00000375446 KIF3BO15066 747 aa33.58■■■□□ 2.97
NINJ1-201ENST00000375446 DNMT1P26358 1616 aaKnown RBP33.57■■■□□ 2.97
NINJ1-201ENST00000375446 PPP6R1Q9UPN7 881 aa33.56■■■□□ 2.96
NINJ1-201ENST00000375446 CROCC2H7BZ55 1655 aa33.53■■■□□ 2.96
NINJ1-201ENST00000375446 LMTK3Q96Q04 1460 aa33.49■■■□□ 2.95
NINJ1-201ENST00000375446 ZMYM3Q14202 1370 aa33.48■■■□□ 2.95
NINJ1-201ENST00000375446 KIF15Q9NS87 1388 aa33.48■■■□□ 2.95
NINJ1-201ENST00000375446 RRP7BPQ9NSQ0 103 aa33.48■■■□□ 2.95
NINJ1-201ENST00000375446 CHIC2Q9UKJ5 165 aa33.48■■■□□ 2.95
NINJ1-201ENST00000375446 C3P01024 1663 aa33.47■■■□□ 2.95
NINJ1-201ENST00000375446 DUOX2Q9NRD8 1548 aa33.47■■■□□ 2.95
NINJ1-201ENST00000375446 MROH2AA6NES4 1674 aa33.45■■■□□ 2.94
NINJ1-201ENST00000375446 ANKRD30AQ9BXX3 1397 aa33.44■■■□□ 2.94
NINJ1-201ENST00000375446 CLTCQ00610 1675 aaKnown RBP33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms