RNA–Protein interactions for RNA: ENST00000374930.7

NUP35-202, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-202ENST00000374930 ACIN1Q9UKV3 1341 aaKnown RBP11.6□□□□□ -0.55
NUP35-202ENST00000374930 EIF4G3O43432 1585 aaKnown RBP11.59□□□□□ -0.55
NUP35-202ENST00000374930 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
NUP35-202ENST00000374930 CCDC18Q5T9S5 1454 aa11.58□□□□□ -0.56
NUP35-202ENST00000374930 LRRC9Q6ZRR7 1453 aa11.58□□□□□ -0.56
NUP35-202ENST00000374930 PPARGC1BQ86YN6 1023 aaKnown RBP11.57□□□□□ -0.56
NUP35-202ENST00000374930 SNAPC4Q5SXM2 1469 aa11.57□□□□□ -0.56
NUP35-202ENST00000374930 RGL2O15211 777 aa11.56□□□□□ -0.56
NUP35-202ENST00000374930 CARMIL2Q6F5E8 1435 aa11.56□□□□□ -0.56
NUP35-202ENST00000374930 CCNB3Q8WWL7 1395 aa11.54□□□□□ -0.56
NUP35-202ENST00000374930 NUP160Q12769 1436 aa11.54□□□□□ -0.56
NUP35-202ENST00000374930 FHOD3Q2V2M9 1422 aa11.54□□□□□ -0.56
NUP35-202ENST00000374930 CDK11AQ9UQ88 783 aaPredicted RBP11.54□□□□□ -0.56
NUP35-202ENST00000374930 CFAP43Q8NDM7 1665 aa11.54□□□□□ -0.56
NUP35-202ENST00000374930 KANK4Q5T7N3 995 aaPredicted RBP11.53□□□□□ -0.56
NUP35-202ENST00000374930 CCER1Q8TC90 406 aaPredicted RBP11.52□□□□□ -0.57
NUP35-202ENST00000374930 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
NUP35-202ENST00000374930 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
NUP35-202ENST00000374930 MTUS2Q5JR59 1369 aa11.5□□□□□ -0.57
NUP35-202ENST00000374930 HECW1Q76N89 1606 aa11.49□□□□□ -0.57
NUP35-202ENST00000374930 GSE1Q14687 1217 aa11.49□□□□□ -0.57
NUP35-202ENST00000374930 RASEFQ8IZ41 740 aa11.49□□□□□ -0.57
NUP35-202ENST00000374930 JPH4Q96JJ6 628 aa11.49□□□□□ -0.57
NUP35-202ENST00000374930 DCAF8Q5TAQ9 597 aa11.48□□□□□ -0.57
NUP35-202ENST00000374930 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
NUP35-202ENST00000374930 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
NUP35-202ENST00000374930 EHBP1L1Q8N3D4 1523 aa11.46□□□□□ -0.57
NUP35-202ENST00000374930 KIAA0556O60303 1618 aa11.46□□□□□ -0.58
NUP35-202ENST00000374930 DISP1Q96F81 1524 aa11.45□□□□□ -0.58
NUP35-202ENST00000374930 ATP1B4Q9UN42 357 aaPredicted RBP11.45□□□□□ -0.58
NUP35-202ENST00000374930 PLCB2Q00722 1185 aa11.44□□□□□ -0.58
NUP35-202ENST00000374930 MIA2Q96PC5 1412 aa11.43□□□□□ -0.58
NUP35-202ENST00000374930 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
NUP35-202ENST00000374930 RNF25Q96BH1 459 aaPredicted RBP11.43□□□□□ -0.58
NUP35-202ENST00000374930 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
NUP35-202ENST00000374930 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
NUP35-202ENST00000374930 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
NUP35-202ENST00000374930 CEP170Q5SW79 1584 aa11.42□□□□□ -0.58
NUP35-202ENST00000374930 TTBK1Q5TCY1 1321 aaPredicted RBP11.42□□□□□ -0.58
NUP35-202ENST00000374930 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
NUP35-202ENST00000374930 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
NUP35-202ENST00000374930 MYOM3Q5VTT5 1437 aa11.41□□□□□ -0.58
NUP35-202ENST00000374930 FGD6Q6ZV73 1430 aa11.4□□□□□ -0.58
NUP35-202ENST00000374930 PHLDB1Q86UU1 1377 aa11.4□□□□□ -0.59
NUP35-202ENST00000374930 ARHGEF11O15085 1522 aa11.4□□□□□ -0.59
NUP35-202ENST00000374930 CHRDL2Q6WN34 429 aa11.39□□□□□ -0.59
NUP35-202ENST00000374930 TIMELESSQ9UNS1 1208 aa11.39□□□□□ -0.59
NUP35-202ENST00000374930 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
NUP35-202ENST00000374930 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
NUP35-202ENST00000374930 SETD5Q9C0A6 1442 aa11.37□□□□□ -0.59
NUP35-202ENST00000374930 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
NUP35-202ENST00000374930 PLEKHD1A6NEE1 506 aa11.35□□□□□ -0.59
NUP35-202ENST00000374930 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
NUP35-202ENST00000374930 PTPRGP23470 1445 aa11.35□□□□□ -0.59
NUP35-202ENST00000374930 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
NUP35-202ENST00000374930 NUP153P49790 1475 aaKnown RBP11.34□□□□□ -0.59
NUP35-202ENST00000374930 TCOF1Q13428 1488 aaKnown RBP11.34□□□□□ -0.59
NUP35-202ENST00000374930 CHRM1P11229 460 aaPredicted RBP11.34□□□□□ -0.59
NUP35-202ENST00000374930 FAM50AQ14320 339 aaKnown RBP11.34□□□□□ -0.59
NUP35-202ENST00000374930 SHROOM2Q13796 1616 aa11.34□□□□□ -0.59
NUP35-202ENST00000374930 TROQ12816 1431 aaPredicted RBP11.34□□□□□ -0.59
NUP35-202ENST00000374930 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
NUP35-202ENST00000374930 PRG4Q92954 1404 aaPredicted RBP11.33□□□□□ -0.6
NUP35-202ENST00000374930 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
NUP35-202ENST00000374930 ABCA8O94911 1581 aa11.32□□□□□ -0.6
NUP35-202ENST00000374930 RIOK3O14730 519 aaKnown RBP11.31□□□□□ -0.6
NUP35-202ENST00000374930 PYGBP11216 843 aa11.31□□□□□ -0.6
NUP35-202ENST00000374930 HFM1A2PYH4 1435 aa11.31□□□□□ -0.6
NUP35-202ENST00000374930 LRRIQ1Q96JM4 1722 aa11.31□□□□□ -0.6
NUP35-202ENST00000374930 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
NUP35-202ENST00000374930 ROCK1Q13464 1354 aa11.29□□□□□ -0.6
NUP35-202ENST00000374930 DHX57Q6P158 1386 aaKnown RBP11.29□□□□□ -0.6
NUP35-202ENST00000374930 CHD1O14646 1710 aa11.29□□□□□ -0.6
NUP35-202ENST00000374930 UACAQ9BZF9 1416 aa11.28□□□□□ -0.6
NUP35-202ENST00000374930 HS6ST3Q8IZP7 471 aa11.28□□□□□ -0.6
NUP35-202ENST00000374930 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
NUP35-202ENST00000374930 RAB3GAP2Q9H2M9 1393 aa11.28□□□□□ -0.6
NUP35-202ENST00000374930 ADCY10Q96PN6 1610 aa11.27□□□□□ -0.6
NUP35-202ENST00000374930 PTPN23Q9H3S7 1636 aa11.27□□□□□ -0.6
NUP35-202ENST00000374930 UHRF1BP1LA0JNW5 1464 aa11.26□□□□□ -0.61
NUP35-202ENST00000374930 ITSN2Q9NZM3 1697 aa11.26□□□□□ -0.61
NUP35-202ENST00000374930 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
NUP35-202ENST00000374930 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
NUP35-202ENST00000374930 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
NUP35-202ENST00000374930 ATP10BO94823 1461 aa11.25□□□□□ -0.61
NUP35-202ENST00000374930 CDK13Q14004 1512 aaKnown RBP11.25□□□□□ -0.61
NUP35-202ENST00000374930 MAGI3Q5TCQ9 1506 aa11.25□□□□□ -0.61
NUP35-202ENST00000374930 HAP1P54257 671 aaPredicted RBP11.24□□□□□ -0.61
NUP35-202ENST00000374930 CFDP1Q9UEE9 299 aaPredicted RBP11.24□□□□□ -0.61
NUP35-202ENST00000374930 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
NUP35-202ENST00000374930 ITGAEP38570 1179 aa11.22□□□□□ -0.61
NUP35-202ENST00000374930 CCDC61Q9Y6R9 512 aa11.22□□□□□ -0.61
NUP35-202ENST00000374930 KIF14Q15058 1648 aa11.21□□□□□ -0.61
NUP35-202ENST00000374930 CFAP44Q96MT7 982 aa11.21□□□□□ -0.61
NUP35-202ENST00000374930 ABCC2Q92887 1545 aa11.2□□□□□ -0.62
NUP35-202ENST00000374930 GPATCH8Q9UKJ3 1502 aaKnown RBP11.2□□□□□ -0.62
NUP35-202ENST00000374930 NAIPQ13075 1403 aa11.2□□□□□ -0.62
NUP35-202ENST00000374930 DNAJC5Q9H3Z4 198 aa11.2□□□□□ -0.62
NUP35-202ENST00000374930 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
NUP35-202ENST00000374930 SGIP1Q9BQI5 828 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms