RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 CHAF1AQ13111 956 aaPredicted RBP14.34□□□□□ -0.11
COL5A2-201ENST00000374866 A0A0U1RQG5 324 aaPredicted RBP14.34□□□□□ -0.11
COL5A2-201ENST00000374866 RTF1Q92541 710 aaKnown RBP14.33□□□□□ -0.12
COL5A2-201ENST00000374866 NACADO15069 1562 aa14.33□□□□□ -0.12
COL5A2-201ENST00000374866 FOXD4L5Q5VV16 416 aaPredicted RBP14.32□□□□□ -0.12
COL5A2-201ENST00000374866 FOXD4L4Q8WXT5 416 aaPredicted RBP14.32□□□□□ -0.12
COL5A2-201ENST00000374866 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
COL5A2-201ENST00000374866 NOP58Q9Y2X3 529 aaKnown RBP14.32□□□□□ -0.12
COL5A2-201ENST00000374866 NUTM2DQ5VT03 806 aaPredicted RBP14.32□□□□□ -0.12
COL5A2-201ENST00000374866 CFDP1Q9UEE9 299 aaPredicted RBP14.32□□□□□ -0.12
COL5A2-201ENST00000374866 NRDCO43847 1150 aa14.31□□□□□ -0.12
COL5A2-201ENST00000374866 TMX4Q9H1E5 349 aaPredicted RBP14.3□□□□□ -0.12
COL5A2-201ENST00000374866 NUTM2FA1L443 756 aa14.29□□□□□ -0.12
COL5A2-201ENST00000374866 MCCP23508 829 aa14.28□□□□□ -0.12
COL5A2-201ENST00000374866 RAD21O60216 631 aa14.28□□□□□ -0.12
COL5A2-201ENST00000374866 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
COL5A2-201ENST00000374866 GORABQ5T7V8 394 aa14.28□□□□□ -0.12
COL5A2-201ENST00000374866 RASSF8Q8NHQ8 419 aa14.27□□□□□ -0.12
COL5A2-201ENST00000374866 TAF7LQ5H9L4 462 aa14.27□□□□□ -0.12
COL5A2-201ENST00000374866 KRI1Q8N9T8 703 aaKnown RBP14.27□□□□□ -0.13
COL5A2-201ENST00000374866 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.13
COL5A2-201ENST00000374866 MSH5O43196 834 aa14.27□□□□□ -0.13
COL5A2-201ENST00000374866 CDCA8Q53HL2 280 aa14.27□□□□□ -0.13
COL5A2-201ENST00000374866 MORC1Q86VD1 984 aa14.26□□□□□ -0.13
COL5A2-201ENST00000374866 LTV1Q96GA3 475 aaPredicted RBP14.26□□□□□ -0.13
COL5A2-201ENST00000374866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
COL5A2-201ENST00000374866 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
COL5A2-201ENST00000374866 TOMM22Q9NS69 142 aa14.25□□□□□ -0.13
COL5A2-201ENST00000374866 SLKQ9H2G2 1235 aaPredicted RBP14.25□□□□□ -0.13
COL5A2-201ENST00000374866 GGT6Q6P531 493 aa14.24□□□□□ -0.13
COL5A2-201ENST00000374866 TRIM6-TRIM34B2RNG4 842 aa14.24□□□□□ -0.13
COL5A2-201ENST00000374866 ITPRIPQ8IWB1 547 aa14.24□□□□□ -0.13
COL5A2-201ENST00000374866 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
COL5A2-201ENST00000374866 FOXD1Q16676 465 aa14.23□□□□□ -0.13
COL5A2-201ENST00000374866 L1TD1Q5T7N2 865 aaKnown RBP14.23□□□□□ -0.13
COL5A2-201ENST00000374866 PES1O00541 588 aaKnown RBP14.23□□□□□ -0.13
COL5A2-201ENST00000374866 FRAT2O75474 233 aaPredicted RBP14.22□□□□□ -0.13
COL5A2-201ENST00000374866 SLC4A10Q6U841 1118 aa14.22□□□□□ -0.13
COL5A2-201ENST00000374866 FOXD4L6Q3SYB3 417 aaPredicted RBP14.22□□□□□ -0.13
COL5A2-201ENST00000374866 FOXD4L3Q6VB84 417 aaPredicted RBP14.22□□□□□ -0.13
COL5A2-201ENST00000374866 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
COL5A2-201ENST00000374866 MARCH6O60337 910 aa14.19□□□□□ -0.14
COL5A2-201ENST00000374866 MFAP1P55081 439 aaKnown RBP14.19□□□□□ -0.14
COL5A2-201ENST00000374866 FBXW7Q969H0 707 aa14.18□□□□□ -0.14
COL5A2-201ENST00000374866 PPP4R2Q9NY27 417 aa14.18□□□□□ -0.14
COL5A2-201ENST00000374866 EIF4G1Q04637 1599 aaKnown RBP14.18□□□□□ -0.14
COL5A2-201ENST00000374866 DEKP35659 375 aaKnown RBP14.18□□□□□ -0.14
COL5A2-201ENST00000374866 NGEFQ8N5V2 710 aa14.17□□□□□ -0.14
COL5A2-201ENST00000374866 CCDC146Q8IYE0 955 aa14.17□□□□□ -0.14
COL5A2-201ENST00000374866 CLIP1P30622 1438 aa14.17□□□□□ -0.14
COL5A2-201ENST00000374866 BCL11BQ9C0K0 894 aaPredicted RBP14.16□□□□□ -0.14
COL5A2-201ENST00000374866 TMF1P82094 1093 aa14.15□□□□□ -0.14
COL5A2-201ENST00000374866 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
COL5A2-201ENST00000374866 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
COL5A2-201ENST00000374866 U2AF1L5P0DN76 240 aaPredicted RBP14.14□□□□□ -0.15
COL5A2-201ENST00000374866 U2AF1Q01081 240 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL5A2-201ENST00000374866 TNNT3P45378 269 aaPredicted RBP14.13□□□□□ -0.15
COL5A2-201ENST00000374866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL5A2-201ENST00000374866 CHMP4BQ9H444 224 aaKnown RBP14.12□□□□□ -0.15
COL5A2-201ENST00000374866 CLUAP1Q96AJ1 413 aa14.11□□□□□ -0.15
COL5A2-201ENST00000374866 MS4A1P11836 297 aa14.11□□□□□ -0.15
COL5A2-201ENST00000374866 CCAR2Q8N163 923 aaKnown RBP14.1□□□□□ -0.15
COL5A2-201ENST00000374866 CEP89Q96ST8 783 aa14.1□□□□□ -0.15
COL5A2-201ENST00000374866 RSF1Q96T23 1441 aaPredicted RBP14.1□□□□□ -0.15
COL5A2-201ENST00000374866 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
COL5A2-201ENST00000374866 HDGFL2Q7Z4V5 671 aaPredicted RBP14.1□□□□□ -0.15
COL5A2-201ENST00000374866 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
COL5A2-201ENST00000374866 TPM4P67936 248 aa14.08□□□□□ -0.16
COL5A2-201ENST00000374866 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
COL5A2-201ENST00000374866 GOLGA6L1Q8N7Z2 621 aa14.07□□□□□ -0.16
COL5A2-201ENST00000374866 KDM4AO75164 1064 aa14.07□□□□□ -0.16
COL5A2-201ENST00000374866 FOSBP53539 338 aa14.07□□□□□ -0.16
COL5A2-201ENST00000374866 KANK1Q14678 1352 aa14.07□□□□□ -0.16
COL5A2-201ENST00000374866 TPD52L1Q16890 204 aaPredicted RBP14.06□□□□□ -0.16
COL5A2-201ENST00000374866 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
COL5A2-201ENST00000374866 SYTL4Q96C24 671 aaPredicted RBP14.06□□□□□ -0.16
COL5A2-201ENST00000374866 TCEAL9Q9UHQ7 104 aa14.05□□□□□ -0.16
COL5A2-201ENST00000374866 MEX3CQ5U5Q3 659 aaKnown RBP14.04□□□□□ -0.16
COL5A2-201ENST00000374866 GPATCH3Q96I76 525 aa14.04□□□□□ -0.16
COL5A2-201ENST00000374866 RILPL2Q969X0 211 aa14.04□□□□□ -0.16
COL5A2-201ENST00000374866 SMC4Q9NTJ3 1288 aa14.04□□□□□ -0.16
COL5A2-201ENST00000374866 RRP7AQ9Y3A4 280 aaKnown RBP14.04□□□□□ -0.16
COL5A2-201ENST00000374866 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
COL5A2-201ENST00000374866 EVA1CP58658 441 aa14.03□□□□□ -0.16
COL5A2-201ENST00000374866 NGDNQ8NEJ9 315 aaKnown RBP14.03□□□□□ -0.16
COL5A2-201ENST00000374866 ELL2O00472 640 aaPredicted RBP14.03□□□□□ -0.16
COL5A2-201ENST00000374866 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
COL5A2-201ENST00000374866 GBP4Q96PP9 640 aa14.02□□□□□ -0.16
COL5A2-201ENST00000374866 SF3A1Q15459 793 aaKnown RBP14.02□□□□□ -0.16
COL5A2-201ENST00000374866 CTDP1Q9Y5B0 961 aaPredicted RBP14.02□□□□□ -0.16
COL5A2-201ENST00000374866 CWC22Q9HCG8 908 aaKnown RBP14.02□□□□□ -0.17
COL5A2-201ENST00000374866 AMPHP49418 695 aa14.01□□□□□ -0.17
COL5A2-201ENST00000374866 TRIM34Q9BYJ4 488 aa14.01□□□□□ -0.17
COL5A2-201ENST00000374866 PCMTD1Q96MG8 357 aaPredicted RBP14.01□□□□□ -0.17
COL5A2-201ENST00000374866 MTMR7Q9Y216 660 aa14□□□□□ -0.17
COL5A2-201ENST00000374866 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
COL5A2-201ENST00000374866 MCTP1Q6DN14 999 aa14□□□□□ -0.17
COL5A2-201ENST00000374866 H3BQV1 296 aa13.99□□□□□ -0.17
COL5A2-201ENST00000374866 IPO8O15397 1037 aaKnown RBP13.99□□□□□ -0.17
COL5A2-201ENST00000374866 HSPA5P11021 654 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms