RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 FBXO22Q8NEZ5 403 aa13.32□□□□□ -0.28
PMS1-202ENST00000374826 MMRN1Q13201 1228 aa13.3□□□□□ -0.28
PMS1-202ENST00000374826 STK25O00506 426 aa13.29□□□□□ -0.28
PMS1-202ENST00000374826 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
PMS1-202ENST00000374826 MFRPQ9BY79 579 aa13.28□□□□□ -0.28
PMS1-202ENST00000374826 KRTAP3-3Q9BYR6 98 aa13.27□□□□□ -0.29
PMS1-202ENST00000374826 KRTAP3-2Q9BYR7 98 aa13.27□□□□□ -0.29
PMS1-202ENST00000374826 RGL2O15211 777 aa13.26□□□□□ -0.29
PMS1-202ENST00000374826 ERBB3P21860 1342 aa13.24□□□□□ -0.29
PMS1-202ENST00000374826 ZSWIM6Q9HCJ5 1215 aa13.24□□□□□ -0.29
PMS1-202ENST00000374826 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
PMS1-202ENST00000374826 VARS2Q5ST30 1063 aaKnown RBP13.14□□□□□ -0.31
PMS1-202ENST00000374826 ARSIQ5FYB1 569 aa13.13□□□□□ -0.31
PMS1-202ENST00000374826 KIF3CO14782 793 aa13.12□□□□□ -0.31
PMS1-202ENST00000374826 C2orf72A6NCS6 295 aa13.1□□□□□ -0.31
PMS1-202ENST00000374826 ZNF687Q8N1G0 1237 aa13.09□□□□□ -0.31
PMS1-202ENST00000374826 PPP1R37O75864 691 aa13.05□□□□□ -0.32
PMS1-202ENST00000374826 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.32
PMS1-202ENST00000374826 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
PMS1-202ENST00000374826 TMC2Q8TDI7 906 aa13.01□□□□□ -0.33
PMS1-202ENST00000374826 SLC34A2O95436 690 aa12.99□□□□□ -0.33
PMS1-202ENST00000374826 HS6ST3Q8IZP7 471 aa12.98□□□□□ -0.33
PMS1-202ENST00000374826 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
PMS1-202ENST00000374826 NUDT7P0C024 238 aa12.94□□□□□ -0.34
PMS1-202ENST00000374826 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
PMS1-202ENST00000374826 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
PMS1-202ENST00000374826 RNF166Q96A37 237 aaPredicted RBP12.89□□□□□ -0.35
PMS1-202ENST00000374826 MYT1LQ9UL68 1186 aa12.89□□□□□ -0.35
PMS1-202ENST00000374826 LHX6Q9UPM6 363 aa12.89□□□□□ -0.35
PMS1-202ENST00000374826 FOXK1P85037 733 aa12.85□□□□□ -0.35
PMS1-202ENST00000374826 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
PMS1-202ENST00000374826 GPHNQ9NQX3 736 aaPredicted RBP12.85□□□□□ -0.35
PMS1-202ENST00000374826 PTGER2P43116 358 aa12.84□□□□□ -0.35
PMS1-202ENST00000374826 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
PMS1-202ENST00000374826 PLPP6Q8IY26 295 aa12.83□□□□□ -0.36
PMS1-202ENST00000374826 PTCD2Q8WV60 388 aaKnown RBP12.83□□□□□ -0.36
PMS1-202ENST00000374826 PBX2P40425 430 aa12.82□□□□□ -0.36
PMS1-202ENST00000374826 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
PMS1-202ENST00000374826 KDM4FA0A1W2PPD8 638 aa12.81□□□□□ -0.36
PMS1-202ENST00000374826 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
PMS1-202ENST00000374826 DSG2Q14126 1118 aa12.79□□□□□ -0.36
PMS1-202ENST00000374826 AXIN2Q9Y2T1 843 aa12.79□□□□□ -0.36
PMS1-202ENST00000374826 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
PMS1-202ENST00000374826 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
PMS1-202ENST00000374826 TBC1D12O60347 775 aa12.74□□□□□ -0.37
PMS1-202ENST00000374826 ARHGAP33O14559 1287 aa12.72□□□□□ -0.37
PMS1-202ENST00000374826 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
PMS1-202ENST00000374826 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
PMS1-202ENST00000374826 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
PMS1-202ENST00000374826 OXER1Q8TDS5 423 aa12.65□□□□□ -0.38
PMS1-202ENST00000374826 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
PMS1-202ENST00000374826 PDE4AP27815 886 aa12.63□□□□□ -0.39
PMS1-202ENST00000374826 PSEN2P49810 448 aa12.63□□□□□ -0.39
PMS1-202ENST00000374826 PPP1R15BQ5SWA1 713 aa12.62□□□□□ -0.39
PMS1-202ENST00000374826 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
PMS1-202ENST00000374826 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
PMS1-202ENST00000374826 TK2O00142 265 aa12.61□□□□□ -0.39
PMS1-202ENST00000374826 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
PMS1-202ENST00000374826 HRO43593 1189 aa12.56□□□□□ -0.4
PMS1-202ENST00000374826 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
PMS1-202ENST00000374826 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
PMS1-202ENST00000374826 DCAF8L2P0C7V8 631 aa12.53□□□□□ -0.4
PMS1-202ENST00000374826 ANO8Q9HCE9 1232 aaPredicted RBP12.53□□□□□ -0.4
PMS1-202ENST00000374826 ZNF454Q8N9F8 522 aa12.52□□□□□ -0.41
PMS1-202ENST00000374826 KCNK17Q96T54 332 aa12.52□□□□□ -0.41
PMS1-202ENST00000374826 KCNH8Q96L42 1107 aa12.51□□□□□ -0.41
PMS1-202ENST00000374826 DDX27Q96GQ7 796 aaKnown RBP12.5□□□□□ -0.41
PMS1-202ENST00000374826 FOSBP53539 338 aa12.49□□□□□ -0.41
PMS1-202ENST00000374826 STAC3Q96MF2 364 aa12.48□□□□□ -0.41
PMS1-202ENST00000374826 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
PMS1-202ENST00000374826 EVI5O60447 810 aa12.47□□□□□ -0.41
PMS1-202ENST00000374826 MFSD10Q14728 455 aa12.47□□□□□ -0.41
PMS1-202ENST00000374826 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
PMS1-202ENST00000374826 MAP3K9P80192 1104 aa12.44□□□□□ -0.42
PMS1-202ENST00000374826 SLC4A5Q9BY07 1137 aa12.44□□□□□ -0.42
PMS1-202ENST00000374826 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
PMS1-202ENST00000374826 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
PMS1-202ENST00000374826 PTPREP23469 700 aa12.42□□□□□ -0.42
PMS1-202ENST00000374826 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
PMS1-202ENST00000374826 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
PMS1-202ENST00000374826 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
PMS1-202ENST00000374826 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
PMS1-202ENST00000374826 ADAM33Q9BZ11 813 aa12.38□□□□□ -0.43
PMS1-202ENST00000374826 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
PMS1-202ENST00000374826 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
PMS1-202ENST00000374826 PCDHGA10Q9Y5H3 936 aa12.32□□□□□ -0.44
PMS1-202ENST00000374826 PTPN5P54829 565 aa12.3□□□□□ -0.44
PMS1-202ENST00000374826 CAMK2BQ13554 666 aa12.29□□□□□ -0.44
PMS1-202ENST00000374826 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
PMS1-202ENST00000374826 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
PMS1-202ENST00000374826 GOLGA8CPA6NN73 597 aa12.27□□□□□ -0.45
PMS1-202ENST00000374826 PHF14O94880 888 aa12.27□□□□□ -0.45
PMS1-202ENST00000374826 THSD4Q6ZMP0 1018 aa12.26□□□□□ -0.45
PMS1-202ENST00000374826 TYW1BQ6NUM6 668 aa12.25□□□□□ -0.45
PMS1-202ENST00000374826 WNT2BQ93097 391 aa12.25□□□□□ -0.45
PMS1-202ENST00000374826 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
PMS1-202ENST00000374826 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
PMS1-202ENST00000374826 NBPF3Q9H094 633 aa12.24□□□□□ -0.45
PMS1-202ENST00000374826 COL9A1P20849 921 aa12.23□□□□□ -0.45
PMS1-202ENST00000374826 DPYSL4O14531 572 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms