RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 ARHGAP5Q13017 1502 aa21.65■■□□□ 1.06
TCEA3-201ENST00000374601 SAMD9LQ8IVG5 1584 aa21.64■■□□□ 1.05
TCEA3-201ENST00000374601 CD109Q6YHK3 1445 aa21.63■■□□□ 1.05
TCEA3-201ENST00000374601 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
TCEA3-201ENST00000374601 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
TCEA3-201ENST00000374601 CFAP74Q9C0B2 1584 aa21.62■■□□□ 1.05
TCEA3-201ENST00000374601 FAM69CQ0P6D2 419 aa21.62■■□□□ 1.05
TCEA3-201ENST00000374601 TCOF1Q13428 1488 aaKnown RBP21.6■■□□□ 1.05
TCEA3-201ENST00000374601 CAMSAP2Q08AD1 1489 aa21.58■■□□□ 1.05
TCEA3-201ENST00000374601 FANCAO15360 1455 aa21.57■■□□□ 1.04
TCEA3-201ENST00000374601 ABCC1P33527 1531 aa21.56■■□□□ 1.04
TCEA3-201ENST00000374601 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
TCEA3-201ENST00000374601 CROCC2H7BZ55 1655 aa21.53■■□□□ 1.04
TCEA3-201ENST00000374601 NEO1Q92859 1461 aa21.52■■□□□ 1.04
TCEA3-201ENST00000374601 SYCP2Q9BX26 1530 aa21.52■■□□□ 1.04
TCEA3-201ENST00000374601 ZNF644Q9H582 1327 aaPredicted RBP21.52■■□□□ 1.03
TCEA3-201ENST00000374601 DNMT1P26358 1616 aaKnown RBP21.51■■□□□ 1.03
TCEA3-201ENST00000374601 TEX14Q8IWB6 1497 aa21.51■■□□□ 1.03
TCEA3-201ENST00000374601 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
TCEA3-201ENST00000374601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.49■■□□□ 1.03
TCEA3-201ENST00000374601 ARHGEF5Q12774 1597 aa21.49■■□□□ 1.03
TCEA3-201ENST00000374601 EFCAB2Q5VUJ9 269 aa21.49■■□□□ 1.03
TCEA3-201ENST00000374601 PLEKHH2Q8IVE3 1493 aa21.49■■□□□ 1.03
TCEA3-201ENST00000374601 AKNAQ7Z591 1439 aa21.48■■□□□ 1.03
TCEA3-201ENST00000374601 ZNF777Q9ULD5 760 aaPredicted RBP21.48■■□□□ 1.03
TCEA3-201ENST00000374601 ADGRL1O94910 1474 aa21.47■■□□□ 1.03
TCEA3-201ENST00000374601 TRHP20396 242 aaPredicted RBP21.47■■□□□ 1.03
TCEA3-201ENST00000374601 MBD5Q9P267 1494 aa21.46■■□□□ 1.03
TCEA3-201ENST00000374601 KIAA1107Q9UPP5 1409 aa21.46■■□□□ 1.03
TCEA3-201ENST00000374601 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.02
TCEA3-201ENST00000374601 RICTORQ6R327 1708 aa21.45■■□□□ 1.02
TCEA3-201ENST00000374601 FRMPD1Q5SYB0 1578 aa21.42■■□□□ 1.02
TCEA3-201ENST00000374601 ADGBQ8N7X0 1667 aa21.42■■□□□ 1.02
TCEA3-201ENST00000374601 CCDC141Q6ZP82 1450 aa21.41■■□□□ 1.02
TCEA3-201ENST00000374601 DAPK1P53355 1430 aa21.41■■□□□ 1.02
TCEA3-201ENST00000374601 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
TCEA3-201ENST00000374601 ABCC5O15440 1437 aa21.4■■□□□ 1.02
TCEA3-201ENST00000374601 SCAPERQ9BY12 1400 aa21.4■■□□□ 1.02
TCEA3-201ENST00000374601 TRAPPC8Q9Y2L5 1435 aa21.39■■□□□ 1.02
TCEA3-201ENST00000374601 MAST1Q9Y2H9 1570 aa21.39■■□□□ 1.01
TCEA3-201ENST00000374601 PTPRKQ15262 1439 aa21.38■■□□□ 1.01
TCEA3-201ENST00000374601 POGZQ7Z3K3 1410 aa21.38■■□□□ 1.01
TCEA3-201ENST00000374601 HNRNPMP52272 730 aaKnown RBP eCLIP21.38■■□□□ 1.01
TCEA3-201ENST00000374601 KDM5CP41229 1560 aa21.38■■□□□ 1.01
TCEA3-201ENST00000374601 SHANK2Q9UPX8 1470 aa21.38■■□□□ 1.01
TCEA3-201ENST00000374601 INO80Q9ULG1 1556 aaPredicted RBP21.37■■□□□ 1.01
TCEA3-201ENST00000374601 DENND4BO75064 1496 aaPredicted RBP21.35■■□□□ 1.01
TCEA3-201ENST00000374601 ZNF518AQ6AHZ1 1483 aa21.34■■□□□ 1.01
TCEA3-201ENST00000374601 COL17A1Q9UMD9 1497 aaPredicted RBP21.34■■□□□ 1.01
TCEA3-201ENST00000374601 ZFYVE16Q7Z3T8 1539 aa21.34■■□□□ 1.01
TCEA3-201ENST00000374601 ZMYM4Q5VZL5 1548 aa21.33■■□□□ 1
TCEA3-201ENST00000374601 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1
TCEA3-201ENST00000374601 HECW2Q9P2P5 1572 aa21.32■■□□□ 1
TCEA3-201ENST00000374601 KDM6BO15054 1643 aa21.32■■□□□ 1
TCEA3-201ENST00000374601 C9orf84Q5VXU9 1444 aa21.31■■□□□ 1
TCEA3-201ENST00000374601 ITGAEP38570 1179 aa21.31■■□□□ 1
TCEA3-201ENST00000374601 PLXNC1O60486 1568 aa21.31■■□□□ 1
TCEA3-201ENST00000374601 GCC2Q8IWJ2 1684 aa21.31■■□□□ 1
TCEA3-201ENST00000374601 ADGRL2O95490 1459 aa21.3■■□□□ 1
TCEA3-201ENST00000374601 ATP7AQ04656 1500 aa21.29■■□□□ 1
TCEA3-201ENST00000374601 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
TCEA3-201ENST00000374601 AFAP1Q8N556 730 aa21.28■■□□□ 1
TCEA3-201ENST00000374601 ABCA6Q8N139 1617 aa21.26■□□□□ 0.99
TCEA3-201ENST00000374601 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
TCEA3-201ENST00000374601 MLH3Q9UHC1 1453 aa21.25■□□□□ 0.99
TCEA3-201ENST00000374601 RTEL1-TNFRSF6BF6WH68 1400 aa21.24■□□□□ 0.99
TCEA3-201ENST00000374601 ROCK1Q13464 1354 aa21.23■□□□□ 0.99
TCEA3-201ENST00000374601 PCGF6Q9BYE7 350 aa21.23■□□□□ 0.99
TCEA3-201ENST00000374601 DIP2CQ9Y2E4 1556 aa21.23■□□□□ 0.99
TCEA3-201ENST00000374601 CHIC2Q9UKJ5 165 aa21.22■□□□□ 0.99
TCEA3-201ENST00000374601 SPAG9O60271 1321 aaKnown RBP21.22■□□□□ 0.99
TCEA3-201ENST00000374601 NCOA1Q15788 1441 aa21.21■□□□□ 0.99
TCEA3-201ENST00000374601 ARHGEF40Q8TER5 1519 aa21.21■□□□□ 0.99
TCEA3-201ENST00000374601 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
TCEA3-201ENST00000374601 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
TCEA3-201ENST00000374601 ANKRD30AQ9BXX3 1397 aa21.19■□□□□ 0.98
TCEA3-201ENST00000374601 HFM1A2PYH4 1435 aa21.19■□□□□ 0.98
TCEA3-201ENST00000374601 MAGI2Q86UL8 1455 aa21.18■□□□□ 0.98
TCEA3-201ENST00000374601 NAIPQ13075 1403 aa21.17■□□□□ 0.98
TCEA3-201ENST00000374601 YEATS2Q9ULM3 1422 aa21.17■□□□□ 0.98
TCEA3-201ENST00000374601 KIF15Q9NS87 1388 aa21.16■□□□□ 0.98
TCEA3-201ENST00000374601 DUOX2Q9NRD8 1548 aa21.15■□□□□ 0.98
TCEA3-201ENST00000374601 RRP7BPQ9NSQ0 103 aa21.15■□□□□ 0.98
TCEA3-201ENST00000374601 SIGLEC1Q9BZZ2 1709 aa21.14■□□□□ 0.97
TCEA3-201ENST00000374601 EIF2AK4Q9P2K8 1649 aaKnown RBP21.12■□□□□ 0.97
TCEA3-201ENST00000374601 REREQ9P2R6 1566 aa21.12■□□□□ 0.97
TCEA3-201ENST00000374601 BCORL1Q5H9F3 1711 aa21.12■□□□□ 0.97
TCEA3-201ENST00000374601 SETD5Q9C0A6 1442 aa21.11■□□□□ 0.97
TCEA3-201ENST00000374601 A2MP01023 1474 aa21.09■□□□□ 0.97
TCEA3-201ENST00000374601 ERBINQ96RT1 1412 aa21.08■□□□□ 0.97
TCEA3-201ENST00000374601 MYT1LQ9UL68 1186 aa21.08■□□□□ 0.97
TCEA3-201ENST00000374601 ANKRD50Q9ULJ7 1429 aa21.08■□□□□ 0.97
TCEA3-201ENST00000374601 ATP10AO60312 1499 aa21.07■□□□□ 0.96
TCEA3-201ENST00000374601 DEPDC5O75140 1603 aa21.06■□□□□ 0.96
TCEA3-201ENST00000374601 RAB3GAP2Q9H2M9 1393 aa21.06■□□□□ 0.96
TCEA3-201ENST00000374601 UNC13BO14795 1591 aa21.06■□□□□ 0.96
TCEA3-201ENST00000374601 RNF17Q9BXT8 1623 aaKnown RBP21.05■□□□□ 0.96
TCEA3-201ENST00000374601 DHX29Q7Z478 1369 aaKnown RBP21.05■□□□□ 0.96
TCEA3-201ENST00000374601 MROH1Q8NDA8 1641 aa21.03■□□□□ 0.96
TCEA3-201ENST00000374601 AGLP35573 1532 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms