RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 CASKIN1Q8WXD9 1431 aa23.33■■□□□ 1.33
UBXN11-207ENST00000374223 SCAPERQ9BY12 1400 aa23.33■■□□□ 1.33
UBXN11-207ENST00000374223 ZMYM4Q5VZL5 1548 aa23.33■■□□□ 1.33
UBXN11-207ENST00000374223 ARID4BQ4LE39 1312 aaPredicted RBP23.32■■□□□ 1.32
UBXN11-207ENST00000374223 CLIP1P30622 1438 aa23.31■■□□□ 1.32
UBXN11-207ENST00000374223 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
UBXN11-207ENST00000374223 POGZQ7Z3K3 1410 aa23.28■■□□□ 1.32
UBXN11-207ENST00000374223 RIMS1Q86UR5 1692 aaKnown RBP23.28■■□□□ 1.32
UBXN11-207ENST00000374223 CDK11AQ9UQ88 783 aaPredicted RBP23.27■■□□□ 1.32
UBXN11-207ENST00000374223 ARHGAP5Q13017 1502 aa23.27■■□□□ 1.32
UBXN11-207ENST00000374223 EFCAB2Q5VUJ9 269 aa23.26■■□□□ 1.31
UBXN11-207ENST00000374223 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
UBXN11-207ENST00000374223 FBXO41Q8TF61 875 aa23.24■■□□□ 1.31
UBXN11-207ENST00000374223 PREX2Q70Z35 1606 aa23.23■■□□□ 1.31
UBXN11-207ENST00000374223 ARHGEF12Q9NZN5 1544 aa23.23■■□□□ 1.31
UBXN11-207ENST00000374223 CCDC18Q5T9S5 1454 aa23.22■■□□□ 1.31
UBXN11-207ENST00000374223 MAGI2Q86UL8 1455 aa23.22■■□□□ 1.31
UBXN11-207ENST00000374223 LMTK3Q96Q04 1460 aa23.22■■□□□ 1.31
UBXN11-207ENST00000374223 FYCO1Q9BQS8 1478 aa23.22■■□□□ 1.31
UBXN11-207ENST00000374223 AFAP1Q8N556 730 aa23.22■■□□□ 1.31
UBXN11-207ENST00000374223 MLECQ14165 292 aa23.2■■□□□ 1.3
UBXN11-207ENST00000374223 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
UBXN11-207ENST00000374223 ITSN2Q9NZM3 1697 aa23.17■■□□□ 1.3
UBXN11-207ENST00000374223 KDM5CP41229 1560 aa23.17■■□□□ 1.3
UBXN11-207ENST00000374223 TRAPPC8Q9Y2L5 1435 aa23.16■■□□□ 1.3
UBXN11-207ENST00000374223 FER1L4A9Z1Z3 1794 aa23.15■■□□□ 1.3
UBXN11-207ENST00000374223 ATP10AO60312 1499 aa23.14■■□□□ 1.29
UBXN11-207ENST00000374223 ABCC1P33527 1531 aa23.14■■□□□ 1.29
UBXN11-207ENST00000374223 ABCA6Q8N139 1617 aa23.13■■□□□ 1.29
UBXN11-207ENST00000374223 LOC105371045A0A1W2PR82 267 aa23.13■■□□□ 1.29
UBXN11-207ENST00000374223 DIP2CQ9Y2E4 1556 aa23.13■■□□□ 1.29
UBXN11-207ENST00000374223 ZNF518AQ6AHZ1 1483 aa23.12■■□□□ 1.29
UBXN11-207ENST00000374223 SAMD9LQ8IVG5 1584 aa23.11■■□□□ 1.29
UBXN11-207ENST00000374223 CEP162Q5TB80 1403 aa23.11■■□□□ 1.29
UBXN11-207ENST00000374223 C9orf84Q5VXU9 1444 aa23.09■■□□□ 1.29
UBXN11-207ENST00000374223 GPATCH8Q9UKJ3 1502 aaKnown RBP23.09■■□□□ 1.29
UBXN11-207ENST00000374223 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
UBXN11-207ENST00000374223 ZNF777Q9ULD5 760 aaPredicted RBP23.07■■□□□ 1.28
UBXN11-207ENST00000374223 MYT1LQ9UL68 1186 aa23.05■■□□□ 1.28
UBXN11-207ENST00000374223 CEBPAP49715 358 aaPredicted RBP23.04■■□□□ 1.28
UBXN11-207ENST00000374223 HSPA2P54652 639 aa23.04■■□□□ 1.28
UBXN11-207ENST00000374223 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
UBXN11-207ENST00000374223 HNRNPMP52272 730 aaKnown RBP eCLIP23.03■■□□□ 1.28
UBXN11-207ENST00000374223 MLH3Q9UHC1 1453 aa23.02■■□□□ 1.28
UBXN11-207ENST00000374223 TIAM1Q13009 1591 aa23■■□□□ 1.27
UBXN11-207ENST00000374223 ZNF644Q9H582 1327 aaPredicted RBP22.99■■□□□ 1.27
UBXN11-207ENST00000374223 MTUS2Q5JR59 1369 aa22.99■■□□□ 1.27
UBXN11-207ENST00000374223 REREQ9P2R6 1566 aa22.97■■□□□ 1.27
UBXN11-207ENST00000374223 PREX1Q8TCU6 1659 aa22.96■■□□□ 1.27
UBXN11-207ENST00000374223 CCNB3Q8WWL7 1395 aa22.95■■□□□ 1.26
UBXN11-207ENST00000374223 SUPT6HQ7KZ85 1726 aaKnown RBP22.94■■□□□ 1.26
UBXN11-207ENST00000374223 CFDP1Q9UEE9 299 aaPredicted RBP22.94■■□□□ 1.26
UBXN11-207ENST00000374223 EHBP1L1Q8N3D4 1523 aa22.93■■□□□ 1.26
UBXN11-207ENST00000374223 C3P01024 1663 aa22.93■■□□□ 1.26
UBXN11-207ENST00000374223 INO80Q9ULG1 1556 aaPredicted RBP22.9■■□□□ 1.26
UBXN11-207ENST00000374223 AGLP35573 1532 aa22.9■■□□□ 1.26
UBXN11-207ENST00000374223 CERKQ8TCT0 537 aa22.88■■□□□ 1.25
UBXN11-207ENST00000374223 ATP7AQ04656 1500 aa22.88■■□□□ 1.25
UBXN11-207ENST00000374223 SPAG9O60271 1321 aaKnown RBP22.88■■□□□ 1.25
UBXN11-207ENST00000374223 KIAA1107Q9UPP5 1409 aa22.87■■□□□ 1.25
UBXN11-207ENST00000374223 SETD1BQ9UPS6 1966 aaKnown RBP22.85■■□□□ 1.25
UBXN11-207ENST00000374223 NCOA2Q15596 1464 aa22.85■■□□□ 1.25
UBXN11-207ENST00000374223 MBD5Q9P267 1494 aa22.85■■□□□ 1.25
UBXN11-207ENST00000374223 UHRF1BP1Q6BDS2 1440 aa22.84■■□□□ 1.25
UBXN11-207ENST00000374223 DMRT2Q9Y5R5 561 aa22.82■■□□□ 1.24
UBXN11-207ENST00000374223 STRCQ7RTU9 1775 aa22.82■■□□□ 1.24
UBXN11-207ENST00000374223 PLXNC1O60486 1568 aa22.82■■□□□ 1.24
UBXN11-207ENST00000374223 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
UBXN11-207ENST00000374223 PLEKHH2Q8IVE3 1493 aa22.81■■□□□ 1.24
UBXN11-207ENST00000374223 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
UBXN11-207ENST00000374223 CLTCQ00610 1675 aaKnown RBP22.79■■□□□ 1.24
UBXN11-207ENST00000374223 ADGBQ8N7X0 1667 aa22.79■■□□□ 1.24
UBXN11-207ENST00000374223 A2MP01023 1474 aa22.78■■□□□ 1.24
UBXN11-207ENST00000374223 ESF1Q9H501 851 aaKnown RBP22.77■■□□□ 1.24
UBXN11-207ENST00000374223 CAMSAP2Q08AD1 1489 aa22.77■■□□□ 1.24
UBXN11-207ENST00000374223 LRRC9Q6ZRR7 1453 aa22.76■■□□□ 1.23
UBXN11-207ENST00000374223 CNTLNQ9NXG0 1405 aa22.74■■□□□ 1.23
UBXN11-207ENST00000374223 MROH2AA6NES4 1674 aa22.73■■□□□ 1.23
UBXN11-207ENST00000374223 PTPRTO14522 1441 aa22.71■■□□□ 1.23
UBXN11-207ENST00000374223 GGT6Q6P531 493 aa22.71■■□□□ 1.23
UBXN11-207ENST00000374223 ZMYM3Q14202 1370 aa22.69■■□□□ 1.22
UBXN11-207ENST00000374223 CCDC141Q6ZP82 1450 aa22.67■■□□□ 1.22
UBXN11-207ENST00000374223 RTEL1-TNFRSF6BF6WH68 1400 aa22.65■■□□□ 1.22
UBXN11-207ENST00000374223 NPATQ14207 1427 aa22.64■■□□□ 1.22
UBXN11-207ENST00000374223 DHX29Q7Z478 1369 aaKnown RBP22.64■■□□□ 1.21
UBXN11-207ENST00000374223 ARHGEF5Q12774 1597 aa22.64■■□□□ 1.21
UBXN11-207ENST00000374223 MAP3K1Q13233 1512 aa22.62■■□□□ 1.21
UBXN11-207ENST00000374223 NCOA1Q15788 1441 aa22.62■■□□□ 1.21
UBXN11-207ENST00000374223 PTPRKQ15262 1439 aa22.61■■□□□ 1.21
UBXN11-207ENST00000374223 MYO3AQ8NEV4 1616 aa22.6■■□□□ 1.21
UBXN11-207ENST00000374223 KIF3BO15066 747 aa22.59■■□□□ 1.21
UBXN11-207ENST00000374223 IQSEC2Q5JU85 1478 aa22.57■■□□□ 1.2
UBXN11-207ENST00000374223 CAMSAP1Q5T5Y3 1602 aa22.57■■□□□ 1.2
UBXN11-207ENST00000374223 LTBP4Q8N2S1 1624 aa22.57■■□□□ 1.2
UBXN11-207ENST00000374223 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
UBXN11-207ENST00000374223 FBXO31Q5XUX0 539 aaPredicted RBP22.56■■□□□ 1.2
UBXN11-207ENST00000374223 ZNF142P52746 1687 aaPredicted RBP22.55■■□□□ 1.2
UBXN11-207ENST00000374223 MAST1Q9Y2H9 1570 aa22.54■■□□□ 1.2
UBXN11-207ENST00000374223 NCKAP5LQ9HCH0 1330 aa22.53■■□□□ 1.2
UBXN11-207ENST00000374223 CEP170BQ9Y4F5 1589 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms