RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 DENND4BO75064 1496 aaPredicted RBP19.03■□□□□ 0.64
HDAC8-201ENST00000373554 FRMPD1Q5SYB0 1578 aa19.01■□□□□ 0.63
HDAC8-201ENST00000373554 RAPGEF3O95398 923 aa19■□□□□ 0.63
HDAC8-201ENST00000373554 CDC42BPBQ9Y5S2 1711 aa19■□□□□ 0.63
HDAC8-201ENST00000373554 CDC42BPAQ5VT25 1732 aa18.99■□□□□ 0.63
HDAC8-201ENST00000373554 RICTORQ6R327 1708 aa18.99■□□□□ 0.63
HDAC8-201ENST00000373554 SCAPERQ9BY12 1400 aa18.98■□□□□ 0.63
HDAC8-201ENST00000373554 MAP3K1Q13233 1512 aa18.97■□□□□ 0.63
HDAC8-201ENST00000373554 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
HDAC8-201ENST00000373554 POGZQ7Z3K3 1410 aa18.96■□□□□ 0.63
HDAC8-201ENST00000373554 GPATCH8Q9UKJ3 1502 aaKnown RBP18.95■□□□□ 0.62
HDAC8-201ENST00000373554 SUPT6HQ7KZ85 1726 aaKnown RBP18.95■□□□□ 0.62
HDAC8-201ENST00000373554 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
HDAC8-201ENST00000373554 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
HDAC8-201ENST00000373554 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
HDAC8-201ENST00000373554 APLP2Q06481 763 aa18.93■□□□□ 0.62
HDAC8-201ENST00000373554 ABCC1P33527 1531 aa18.93■□□□□ 0.62
HDAC8-201ENST00000373554 ZNF518AQ6AHZ1 1483 aa18.92■□□□□ 0.62
HDAC8-201ENST00000373554 NCOA2Q15596 1464 aa18.91■□□□□ 0.62
HDAC8-201ENST00000373554 ARHGEF40Q8TER5 1519 aa18.91■□□□□ 0.62
HDAC8-201ENST00000373554 CFDP1Q9UEE9 299 aaPredicted RBP18.9■□□□□ 0.62
HDAC8-201ENST00000373554 MAGI2Q86UL8 1455 aa18.9■□□□□ 0.62
HDAC8-201ENST00000373554 SAMD9LQ8IVG5 1584 aa18.89■□□□□ 0.62
HDAC8-201ENST00000373554 ZNF777Q9ULD5 760 aaPredicted RBP18.89■□□□□ 0.61
HDAC8-201ENST00000373554 ZFYVE16Q7Z3T8 1539 aa18.89■□□□□ 0.61
HDAC8-201ENST00000373554 KDM5CP41229 1560 aa18.87■□□□□ 0.61
HDAC8-201ENST00000373554 PLEKHH2Q8IVE3 1493 aa18.87■□□□□ 0.61
HDAC8-201ENST00000373554 SYCP2Q9BX26 1530 aa18.85■□□□□ 0.61
HDAC8-201ENST00000373554 ARHGEF12Q9NZN5 1544 aa18.85■□□□□ 0.61
HDAC8-201ENST00000373554 KANK4Q5T7N3 995 aaPredicted RBP18.85■□□□□ 0.61
HDAC8-201ENST00000373554 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
HDAC8-201ENST00000373554 YEATS2Q9ULM3 1422 aa18.84■□□□□ 0.61
HDAC8-201ENST00000373554 AFAP1Q8N556 730 aa18.83■□□□□ 0.6
HDAC8-201ENST00000373554 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
HDAC8-201ENST00000373554 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.6
HDAC8-201ENST00000373554 KDM4FA0A1W2PPD8 638 aa18.82■□□□□ 0.6
HDAC8-201ENST00000373554 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
HDAC8-201ENST00000373554 MLH3Q9UHC1 1453 aa18.8■□□□□ 0.6
HDAC8-201ENST00000373554 ARID4BQ4LE39 1312 aaPredicted RBP18.78■□□□□ 0.6
HDAC8-201ENST00000373554 CAMSAP2Q08AD1 1489 aa18.77■□□□□ 0.6
HDAC8-201ENST00000373554 C9orf84Q5VXU9 1444 aa18.77■□□□□ 0.6
HDAC8-201ENST00000373554 HNRNPMP52272 730 aaKnown RBP eCLIP18.77■□□□□ 0.6
HDAC8-201ENST00000373554 ATP10AO60312 1499 aa18.77■□□□□ 0.59
HDAC8-201ENST00000373554 ZNF644Q9H582 1327 aaPredicted RBP18.76■□□□□ 0.59
HDAC8-201ENST00000373554 MYOM3Q5VTT5 1437 aa18.76■□□□□ 0.59
HDAC8-201ENST00000373554 LMTK3Q96Q04 1460 aa18.76■□□□□ 0.59
HDAC8-201ENST00000373554 DIP2CQ9Y2E4 1556 aa18.76■□□□□ 0.59
HDAC8-201ENST00000373554 ABCA6Q8N139 1617 aa18.75■□□□□ 0.59
HDAC8-201ENST00000373554 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
HDAC8-201ENST00000373554 FBXO41Q8TF61 875 aa18.74■□□□□ 0.59
HDAC8-201ENST00000373554 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
HDAC8-201ENST00000373554 MBD5Q9P267 1494 aa18.73■□□□□ 0.59
HDAC8-201ENST00000373554 BCORL1Q5H9F3 1711 aa18.73■□□□□ 0.59
HDAC8-201ENST00000373554 ATP7AQ04656 1500 aa18.73■□□□□ 0.59
HDAC8-201ENST00000373554 KIDINS220Q9ULH0 1771 aa18.73■□□□□ 0.59
HDAC8-201ENST00000373554 REREQ9P2R6 1566 aa18.72■□□□□ 0.59
HDAC8-201ENST00000373554 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
HDAC8-201ENST00000373554 CCDC141Q6ZP82 1450 aa18.71■□□□□ 0.59
HDAC8-201ENST00000373554 SIGLEC1Q9BZZ2 1709 aa18.71■□□□□ 0.59
HDAC8-201ENST00000373554 ADAMTSL3P82987 1691 aa18.7■□□□□ 0.58
HDAC8-201ENST00000373554 ARHGEF5Q12774 1597 aa18.69■□□□□ 0.58
HDAC8-201ENST00000373554 SOCS7O14512 581 aa18.69■□□□□ 0.58
HDAC8-201ENST00000373554 RSPH4AQ5TD94 716 aa18.68■□□□□ 0.58
HDAC8-201ENST00000373554 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
HDAC8-201ENST00000373554 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
HDAC8-201ENST00000373554 FGD6Q6ZV73 1430 aa18.66■□□□□ 0.58
HDAC8-201ENST00000373554 PTPN23Q9H3S7 1636 aa18.65■□□□□ 0.58
HDAC8-201ENST00000373554 AGLP35573 1532 aa18.64■□□□□ 0.58
HDAC8-201ENST00000373554 MLECQ14165 292 aa18.63■□□□□ 0.57
HDAC8-201ENST00000373554 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
HDAC8-201ENST00000373554 A2MP01023 1474 aa18.62■□□□□ 0.57
HDAC8-201ENST00000373554 RIMS1Q86UR5 1692 aaKnown RBP18.61■□□□□ 0.57
HDAC8-201ENST00000373554 PTPRMP28827 1452 aa18.61■□□□□ 0.57
HDAC8-201ENST00000373554 TSPY4P0CV99 314 aa18.61■□□□□ 0.57
HDAC8-201ENST00000373554 TSPY10P0CW01 314 aa18.61■□□□□ 0.57
HDAC8-201ENST00000373554 FER1L4A9Z1Z3 1794 aa18.6■□□□□ 0.57
HDAC8-201ENST00000373554 PLXNC1O60486 1568 aa18.6■□□□□ 0.57
HDAC8-201ENST00000373554 TCOF1Q13428 1488 aaKnown RBP18.6■□□□□ 0.57
HDAC8-201ENST00000373554 MAST1Q9Y2H9 1570 aa18.59■□□□□ 0.57
HDAC8-201ENST00000373554 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
HDAC8-201ENST00000373554 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
HDAC8-201ENST00000373554 DNMT1P26358 1616 aaKnown RBP18.56■□□□□ 0.56
HDAC8-201ENST00000373554 DAPK1P53355 1430 aa18.54■□□□□ 0.56
HDAC8-201ENST00000373554 DHX29Q7Z478 1369 aaKnown RBP18.54■□□□□ 0.56
HDAC8-201ENST00000373554 ABCC5O15440 1437 aa18.53■□□□□ 0.56
HDAC8-201ENST00000373554 ESF1Q9H501 851 aaKnown RBP18.53■□□□□ 0.56
HDAC8-201ENST00000373554 FAM50AQ14320 339 aaKnown RBP18.52■□□□□ 0.56
HDAC8-201ENST00000373554 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
HDAC8-201ENST00000373554 CNTLNQ9NXG0 1405 aa18.49■□□□□ 0.55
HDAC8-201ENST00000373554 PLPPR3Q6T4P5 718 aa18.48■□□□□ 0.55
HDAC8-201ENST00000373554 ILDR2Q71H61 639 aa18.48■□□□□ 0.55
HDAC8-201ENST00000373554 GGT6Q6P531 493 aa18.47■□□□□ 0.55
HDAC8-201ENST00000373554 DUOX2Q9NRD8 1548 aa18.46■□□□□ 0.55
HDAC8-201ENST00000373554 KIF3BO15066 747 aa18.46■□□□□ 0.55
HDAC8-201ENST00000373554 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
HDAC8-201ENST00000373554 KIF15Q9NS87 1388 aa18.45■□□□□ 0.54
HDAC8-201ENST00000373554 MROH2AA6NES4 1674 aa18.44■□□□□ 0.54
HDAC8-201ENST00000373554 ANKRD30AQ9BXX3 1397 aa18.44■□□□□ 0.54
HDAC8-201ENST00000373554 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
HDAC8-201ENST00000373554 C3P01024 1663 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms