RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 RALBP1Q15311 655 aa18.17■□□□□ 0.5
LMX1B-202ENST00000373474 FOXD1Q16676 465 aa18.16■□□□□ 0.5
LMX1B-202ENST00000373474 HSCBQ8IWL3 235 aa18.15■□□□□ 0.5
LMX1B-202ENST00000373474 TSHZ2Q9NRE2 1034 aa18.14■□□□□ 0.5
LMX1B-202ENST00000373474 ROCK2O75116 1388 aaKnown RBP18.14■□□□□ 0.49
LMX1B-202ENST00000373474 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
LMX1B-202ENST00000373474 MORC1Q86VD1 984 aa18.12■□□□□ 0.49
LMX1B-202ENST00000373474 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
LMX1B-202ENST00000373474 PLCB2Q00722 1185 aa18.11■□□□□ 0.49
LMX1B-202ENST00000373474 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
LMX1B-202ENST00000373474 TCERG1O14776 1098 aaKnown RBP18.1■□□□□ 0.49
LMX1B-202ENST00000373474 ANKRD30AQ9BXX3 1397 aa18.09■□□□□ 0.49
LMX1B-202ENST00000373474 PTMSP20962 102 aa18.08■□□□□ 0.49
LMX1B-202ENST00000373474 TPRNQ4KMQ1 711 aa18.08■□□□□ 0.49
LMX1B-202ENST00000373474 DHX57Q6P158 1386 aaKnown RBP18.08■□□□□ 0.49
LMX1B-202ENST00000373474 CARMIL2Q6F5E8 1435 aa18.08■□□□□ 0.48
LMX1B-202ENST00000373474 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
LMX1B-202ENST00000373474 CFAP44Q96MT7 982 aa18.06■□□□□ 0.48
LMX1B-202ENST00000373474 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
LMX1B-202ENST00000373474 TNNT3P45378 269 aaPredicted RBP18.05■□□□□ 0.48
LMX1B-202ENST00000373474 NUP155O75694 1391 aa18.05■□□□□ 0.48
LMX1B-202ENST00000373474 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
LMX1B-202ENST00000373474 A0A0G2JS52 829 aa18.03■□□□□ 0.48
LMX1B-202ENST00000373474 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
LMX1B-202ENST00000373474 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
LMX1B-202ENST00000373474 OS9Q13438 667 aaPredicted RBP18.02■□□□□ 0.48
LMX1B-202ENST00000373474 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
LMX1B-202ENST00000373474 L3MBTL2Q969R5 705 aa18.01■□□□□ 0.47
LMX1B-202ENST00000373474 EIF3AQ14152 1382 aaKnown RBP18■□□□□ 0.47
LMX1B-202ENST00000373474 SPRYD3Q8NCJ5 442 aa18■□□□□ 0.47
LMX1B-202ENST00000373474 MCCP23508 829 aa18■□□□□ 0.47
LMX1B-202ENST00000373474 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
LMX1B-202ENST00000373474 CCDC18Q5T9S5 1454 aa17.99■□□□□ 0.47
LMX1B-202ENST00000373474 IPO9Q96P70 1041 aaKnown RBP17.99■□□□□ 0.47
LMX1B-202ENST00000373474 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
LMX1B-202ENST00000373474 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
LMX1B-202ENST00000373474 RUSC2Q8N2Y8 1516 aa17.97■□□□□ 0.47
LMX1B-202ENST00000373474 GOLGA6L4A6NEF3 574 aa17.97■□□□□ 0.47
LMX1B-202ENST00000373474 KIAA2012Q0VF49 1180 aa17.96■□□□□ 0.47
LMX1B-202ENST00000373474 PDE3BQ13370 1112 aa17.96■□□□□ 0.47
LMX1B-202ENST00000373474 HAP1P54257 671 aaPredicted RBP17.96■□□□□ 0.47
LMX1B-202ENST00000373474 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
LMX1B-202ENST00000373474 KIF15Q9NS87 1388 aa17.95■□□□□ 0.46
LMX1B-202ENST00000373474 KCNJ4P48050 445 aa17.95■□□□□ 0.46
LMX1B-202ENST00000373474 HDGFL2Q7Z4V5 671 aaPredicted RBP17.95■□□□□ 0.46
LMX1B-202ENST00000373474 DRC7Q8IY82 874 aa17.94■□□□□ 0.46
LMX1B-202ENST00000373474 PHLDB1Q86UU1 1377 aa17.94■□□□□ 0.46
LMX1B-202ENST00000373474 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
LMX1B-202ENST00000373474 CALD1Q05682 793 aaKnown RBP17.93■□□□□ 0.46
LMX1B-202ENST00000373474 NLRP13Q86W25 1043 aa17.93■□□□□ 0.46
LMX1B-202ENST00000373474 SAFB2Q14151 953 aaKnown RBP eCLIP17.92■□□□□ 0.46
LMX1B-202ENST00000373474 GBP4Q96PP9 640 aa17.92■□□□□ 0.46
LMX1B-202ENST00000373474 FGD1P98174 961 aa17.92■□□□□ 0.46
LMX1B-202ENST00000373474 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
LMX1B-202ENST00000373474 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
LMX1B-202ENST00000373474 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
LMX1B-202ENST00000373474 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
LMX1B-202ENST00000373474 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
LMX1B-202ENST00000373474 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
LMX1B-202ENST00000373474 MYBBP1AQ9BQG0 1328 aaKnown RBP17.9■□□□□ 0.46
LMX1B-202ENST00000373474 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
LMX1B-202ENST00000373474 LMOD2Q6P5Q4 547 aa17.87■□□□□ 0.45
LMX1B-202ENST00000373474 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
LMX1B-202ENST00000373474 STK26Q9P289 416 aa17.87■□□□□ 0.45
LMX1B-202ENST00000373474 EFCAB2Q5VUJ9 269 aa17.87■□□□□ 0.45
LMX1B-202ENST00000373474 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.86■□□□□ 0.45
LMX1B-202ENST00000373474 GGT6Q6P531 493 aa17.86■□□□□ 0.45
LMX1B-202ENST00000373474 SLKQ9H2G2 1235 aaPredicted RBP17.86■□□□□ 0.45
LMX1B-202ENST00000373474 HNRNPMP52272 730 aaKnown RBP eCLIP17.85■□□□□ 0.45
LMX1B-202ENST00000373474 RSPH4AQ5TD94 716 aa17.85■□□□□ 0.45
LMX1B-202ENST00000373474 NAP1L2Q9ULW6 460 aaPredicted RBP17.85■□□□□ 0.45
LMX1B-202ENST00000373474 USP35Q9P2H5 1018 aa17.85■□□□□ 0.45
LMX1B-202ENST00000373474 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
LMX1B-202ENST00000373474 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
LMX1B-202ENST00000373474 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.45
LMX1B-202ENST00000373474 HSP90AA2PQ14568 343 aaPredicted RBP17.83■□□□□ 0.44
LMX1B-202ENST00000373474 GOLGA6L1Q8N7Z2 621 aa17.83■□□□□ 0.44
LMX1B-202ENST00000373474 SYAP1Q96A49 352 aaPredicted RBP17.82■□□□□ 0.44
LMX1B-202ENST00000373474 GOLGA6L3A6NEY3 463 aa17.82■□□□□ 0.44
LMX1B-202ENST00000373474 SOX12O15370 315 aa17.82■□□□□ 0.44
LMX1B-202ENST00000373474 MFAP1P55081 439 aaKnown RBP17.82■□□□□ 0.44
LMX1B-202ENST00000373474 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
LMX1B-202ENST00000373474 PRKRIP1Q9H875 184 aaPredicted RBP17.81■□□□□ 0.44
LMX1B-202ENST00000373474 APBB1O00213 710 aa17.8■□□□□ 0.44
LMX1B-202ENST00000373474 GZF1Q9H116 711 aaPredicted RBP17.8■□□□□ 0.44
LMX1B-202ENST00000373474 TAOK2Q9UL54 1235 aa17.8■□□□□ 0.44
LMX1B-202ENST00000373474 KIAA1211Q6ZU35 1233 aa17.79■□□□□ 0.44
LMX1B-202ENST00000373474 CENPQQ7L2Z9 268 aaPredicted RBP17.78■□□□□ 0.44
LMX1B-202ENST00000373474 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
LMX1B-202ENST00000373474 RRP1P56182 461 aaKnown RBP17.77■□□□□ 0.44
LMX1B-202ENST00000373474 ST20-MTHFSA0A0A6YYL1 179 aa17.76■□□□□ 0.43
LMX1B-202ENST00000373474 MLECQ14165 292 aa17.76■□□□□ 0.43
LMX1B-202ENST00000373474 USP47Q96K76 1375 aa17.76■□□□□ 0.43
LMX1B-202ENST00000373474 SETQ01105 290 aaPredicted RBP17.76■□□□□ 0.43
LMX1B-202ENST00000373474 TERF2IPQ9NYB0 399 aa17.76■□□□□ 0.43
LMX1B-202ENST00000373474 KIF21BO75037 1637 aa17.76■□□□□ 0.43
LMX1B-202ENST00000373474 HTATSF1O43719 755 aaKnown RBP17.76■□□□□ 0.43
LMX1B-202ENST00000373474 PANK3Q9H999 370 aa17.75■□□□□ 0.43
LMX1B-202ENST00000373474 CUX1P39880 1505 aa17.75■□□□□ 0.43
LMX1B-202ENST00000373474 KIF3BO15066 747 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms