RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 TCOF1Q13428 1488 aaKnown RBP17.63■□□□□ 0.41
CALCOCO2-202ENST00000372317 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
CALCOCO2-202ENST00000372317 ARAP3Q8WWN8 1544 aa17.62■□□□□ 0.41
CALCOCO2-202ENST00000372317 CAMSAP2Q08AD1 1489 aa17.62■□□□□ 0.41
CALCOCO2-202ENST00000372317 MAP3K4Q9Y6R4 1608 aa17.61■□□□□ 0.41
CALCOCO2-202ENST00000372317 PLCH2O75038 1416 aa17.61■□□□□ 0.41
CALCOCO2-202ENST00000372317 CFDP1Q9UEE9 299 aaPredicted RBP17.6■□□□□ 0.41
CALCOCO2-202ENST00000372317 SAMD9LQ8IVG5 1584 aa17.6■□□□□ 0.41
CALCOCO2-202ENST00000372317 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
CALCOCO2-202ENST00000372317 CD109Q6YHK3 1445 aa17.57■□□□□ 0.4
CALCOCO2-202ENST00000372317 KIF13AQ9H1H9 1805 aa17.56■□□□□ 0.4
CALCOCO2-202ENST00000372317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.56■□□□□ 0.4
CALCOCO2-202ENST00000372317 ZNF644Q9H582 1327 aaPredicted RBP17.55■□□□□ 0.4
CALCOCO2-202ENST00000372317 ZNF777Q9ULD5 760 aaPredicted RBP17.55■□□□□ 0.4
CALCOCO2-202ENST00000372317 ABCC1P33527 1531 aa17.55■□□□□ 0.4
CALCOCO2-202ENST00000372317 FANCAO15360 1455 aa17.55■□□□□ 0.4
CALCOCO2-202ENST00000372317 CFAP74Q9C0B2 1584 aa17.54■□□□□ 0.4
CALCOCO2-202ENST00000372317 SYCP2Q9BX26 1530 aa17.54■□□□□ 0.4
CALCOCO2-202ENST00000372317 FAM69CQ0P6D2 419 aa17.54■□□□□ 0.4
CALCOCO2-202ENST00000372317 PCGF6Q9BYE7 350 aa17.53■□□□□ 0.4
CALCOCO2-202ENST00000372317 DNMT1P26358 1616 aaKnown RBP17.53■□□□□ 0.4
CALCOCO2-202ENST00000372317 PPRC1Q5VV67 1664 aaKnown RBP17.52■□□□□ 0.39
CALCOCO2-202ENST00000372317 PLEKHH2Q8IVE3 1493 aa17.51■□□□□ 0.39
CALCOCO2-202ENST00000372317 EFCAB2Q5VUJ9 269 aa17.5■□□□□ 0.39
CALCOCO2-202ENST00000372317 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
CALCOCO2-202ENST00000372317 ARHGEF5Q12774 1597 aa17.49■□□□□ 0.39
CALCOCO2-202ENST00000372317 DAPK1P53355 1430 aa17.49■□□□□ 0.39
CALCOCO2-202ENST00000372317 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
CALCOCO2-202ENST00000372317 ITGAEP38570 1179 aa17.48■□□□□ 0.39
CALCOCO2-202ENST00000372317 ADGRL1O94910 1474 aa17.48■□□□□ 0.39
CALCOCO2-202ENST00000372317 NEO1Q92859 1461 aa17.48■□□□□ 0.39
CALCOCO2-202ENST00000372317 MBD5Q9P267 1494 aa17.48■□□□□ 0.39
CALCOCO2-202ENST00000372317 ABCC5O15440 1437 aa17.47■□□□□ 0.39
CALCOCO2-202ENST00000372317 KIAA1107Q9UPP5 1409 aa17.47■□□□□ 0.39
CALCOCO2-202ENST00000372317 CCDC141Q6ZP82 1450 aa17.47■□□□□ 0.39
CALCOCO2-202ENST00000372317 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
CALCOCO2-202ENST00000372317 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
CALCOCO2-202ENST00000372317 TSPOAP1O95153 1857 aa17.46■□□□□ 0.39
CALCOCO2-202ENST00000372317 TEX14Q8IWB6 1497 aa17.46■□□□□ 0.39
CALCOCO2-202ENST00000372317 SHANK2Q9UPX8 1470 aa17.44■□□□□ 0.38
CALCOCO2-202ENST00000372317 TRAPPC8Q9Y2L5 1435 aa17.42■□□□□ 0.38
CALCOCO2-202ENST00000372317 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.38
CALCOCO2-202ENST00000372317 POGZQ7Z3K3 1410 aa17.41■□□□□ 0.38
CALCOCO2-202ENST00000372317 SCAPERQ9BY12 1400 aa17.41■□□□□ 0.38
CALCOCO2-202ENST00000372317 ADGBQ8N7X0 1667 aa17.41■□□□□ 0.38
CALCOCO2-202ENST00000372317 C9orf84Q5VXU9 1444 aa17.4■□□□□ 0.38
CALCOCO2-202ENST00000372317 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
CALCOCO2-202ENST00000372317 ADGRL2O95490 1459 aa17.38■□□□□ 0.37
CALCOCO2-202ENST00000372317 ZFYVE16Q7Z3T8 1539 aa17.38■□□□□ 0.37
CALCOCO2-202ENST00000372317 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
CALCOCO2-202ENST00000372317 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
CALCOCO2-202ENST00000372317 FRMPD1Q5SYB0 1578 aa17.37■□□□□ 0.37
CALCOCO2-202ENST00000372317 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
CALCOCO2-202ENST00000372317 KDM5CP41229 1560 aa17.36■□□□□ 0.37
CALCOCO2-202ENST00000372317 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
CALCOCO2-202ENST00000372317 GCC2Q8IWJ2 1684 aa17.36■□□□□ 0.37
CALCOCO2-202ENST00000372317 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
CALCOCO2-202ENST00000372317 ROCK1Q13464 1354 aa17.35■□□□□ 0.37
CALCOCO2-202ENST00000372317 RICTORQ6R327 1708 aa17.35■□□□□ 0.37
CALCOCO2-202ENST00000372317 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
CALCOCO2-202ENST00000372317 PLXNC1O60486 1568 aa17.34■□□□□ 0.37
CALCOCO2-202ENST00000372317 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
CALCOCO2-202ENST00000372317 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.36
CALCOCO2-202ENST00000372317 HECW2Q9P2P5 1572 aa17.32■□□□□ 0.36
CALCOCO2-202ENST00000372317 AFAP1Q8N556 730 aa17.32■□□□□ 0.36
CALCOCO2-202ENST00000372317 NAIPQ13075 1403 aa17.31■□□□□ 0.36
CALCOCO2-202ENST00000372317 ANKRD30AQ9BXX3 1397 aa17.31■□□□□ 0.36
CALCOCO2-202ENST00000372317 ZMYM4Q5VZL5 1548 aa17.31■□□□□ 0.36
CALCOCO2-202ENST00000372317 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
CALCOCO2-202ENST00000372317 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
CALCOCO2-202ENST00000372317 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
CALCOCO2-202ENST00000372317 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
CALCOCO2-202ENST00000372317 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
CALCOCO2-202ENST00000372317 RTEL1-TNFRSF6BF6WH68 1400 aa17.29■□□□□ 0.36
CALCOCO2-202ENST00000372317 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
CALCOCO2-202ENST00000372317 KIF15Q9NS87 1388 aa17.28■□□□□ 0.36
CALCOCO2-202ENST00000372317 RAPGEF3O95398 923 aa17.28■□□□□ 0.36
CALCOCO2-202ENST00000372317 COL17A1Q9UMD9 1497 aaPredicted RBP17.28■□□□□ 0.36
CALCOCO2-202ENST00000372317 KIDINS220Q9ULH0 1771 aa17.28■□□□□ 0.36
CALCOCO2-202ENST00000372317 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
CALCOCO2-202ENST00000372317 KDM6BO15054 1643 aa17.27■□□□□ 0.36
CALCOCO2-202ENST00000372317 RAB3GAP2Q9H2M9 1393 aa17.27■□□□□ 0.35
CALCOCO2-202ENST00000372317 ABCA6Q8N139 1617 aa17.26■□□□□ 0.35
CALCOCO2-202ENST00000372317 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
CALCOCO2-202ENST00000372317 DIP2CQ9Y2E4 1556 aa17.23■□□□□ 0.35
CALCOCO2-202ENST00000372317 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
CALCOCO2-202ENST00000372317 ARHGEF40Q8TER5 1519 aa17.22■□□□□ 0.35
CALCOCO2-202ENST00000372317 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
CALCOCO2-202ENST00000372317 MYT1LQ9UL68 1186 aa17.21■□□□□ 0.35
CALCOCO2-202ENST00000372317 MAGI2Q86UL8 1455 aa17.2■□□□□ 0.34
CALCOCO2-202ENST00000372317 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
CALCOCO2-202ENST00000372317 A2MP01023 1474 aa17.17■□□□□ 0.34
CALCOCO2-202ENST00000372317 EIF2AK4Q9P2K8 1649 aaKnown RBP17.16■□□□□ 0.34
CALCOCO2-202ENST00000372317 UNC13BO14795 1591 aa17.15■□□□□ 0.34
CALCOCO2-202ENST00000372317 REREQ9P2R6 1566 aa17.13■□□□□ 0.33
CALCOCO2-202ENST00000372317 DHX29Q7Z478 1369 aaKnown RBP17.13■□□□□ 0.33
CALCOCO2-202ENST00000372317 ATP10AO60312 1499 aa17.12■□□□□ 0.33
CALCOCO2-202ENST00000372317 HRCP23327 699 aa17.11■□□□□ 0.33
CALCOCO2-202ENST00000372317 KDM5DQ9BY66 1539 aa17.11■□□□□ 0.33
CALCOCO2-202ENST00000372317 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms