RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ARHGAP5Q13017 1502 aa31.81■■■□□ 2.68
TMEM53-205ENST00000372244 RICTORQ6R327 1708 aa31.79■■■□□ 2.68
TMEM53-205ENST00000372244 POGZQ7Z3K3 1410 aa31.76■■■□□ 2.68
TMEM53-205ENST00000372244 GPATCH8Q9UKJ3 1502 aaKnown RBP31.76■■■□□ 2.68
TMEM53-205ENST00000372244 CDC42BPBQ9Y5S2 1711 aa31.76■■■□□ 2.67
TMEM53-205ENST00000372244 PREX2Q70Z35 1606 aa31.73■■■□□ 2.67
TMEM53-205ENST00000372244 AFAP1Q8N556 730 aa31.72■■■□□ 2.67
TMEM53-205ENST00000372244 ZMYM4Q5VZL5 1548 aa31.71■■■□□ 2.67
TMEM53-205ENST00000372244 MAGI2Q86UL8 1455 aa31.71■■■□□ 2.67
TMEM53-205ENST00000372244 CCNB3Q8WWL7 1395 aa31.71■■■□□ 2.67
TMEM53-205ENST00000372244 EHBP1L1Q8N3D4 1523 aa31.69■■■□□ 2.66
TMEM53-205ENST00000372244 CDC42BPAQ5VT25 1732 aa31.69■■■□□ 2.66
TMEM53-205ENST00000372244 CFDP1Q9UEE9 299 aaPredicted RBP31.68■■■□□ 2.66
TMEM53-205ENST00000372244 TIAM1Q13009 1591 aa31.66■■■□□ 2.66
TMEM53-205ENST00000372244 ZNF518AQ6AHZ1 1483 aa31.66■■■□□ 2.66
TMEM53-205ENST00000372244 MAP3K1Q13233 1512 aa31.65■■■□□ 2.66
TMEM53-205ENST00000372244 ARHGEF12Q9NZN5 1544 aa31.65■■■□□ 2.66
TMEM53-205ENST00000372244 YEATS2Q9ULM3 1422 aa31.64■■■□□ 2.66
TMEM53-205ENST00000372244 ZNF777Q9ULD5 760 aaPredicted RBP31.64■■■□□ 2.66
TMEM53-205ENST00000372244 ARHGEF40Q8TER5 1519 aa31.62■■■□□ 2.65
TMEM53-205ENST00000372244 TRAPPC8Q9Y2L5 1435 aa31.61■■■□□ 2.65
TMEM53-205ENST00000372244 ABCC1P33527 1531 aa31.6■■■□□ 2.65
TMEM53-205ENST00000372244 KANK4Q5T7N3 995 aaPredicted RBP31.6■■■□□ 2.65
TMEM53-205ENST00000372244 LRRC9Q6ZRR7 1453 aa31.6■■■□□ 2.65
TMEM53-205ENST00000372244 ZFYVE16Q7Z3T8 1539 aa31.6■■■□□ 2.65
TMEM53-205ENST00000372244 KDM5CP41229 1560 aa31.58■■■□□ 2.65
TMEM53-205ENST00000372244 KIAA1107Q9UPP5 1409 aa31.57■■■□□ 2.64
TMEM53-205ENST00000372244 NCOA2Q15596 1464 aa31.57■■■□□ 2.64
TMEM53-205ENST00000372244 HNRNPMP52272 730 aaKnown RBP eCLIP31.56■■■□□ 2.64
TMEM53-205ENST00000372244 ARID4BQ4LE39 1312 aaPredicted RBP31.56■■■□□ 2.64
TMEM53-205ENST00000372244 SAMD9LQ8IVG5 1584 aa31.55■■■□□ 2.64
TMEM53-205ENST00000372244 ATP10AO60312 1499 aa31.54■■■□□ 2.64
TMEM53-205ENST00000372244 MLH3Q9UHC1 1453 aa31.54■■■□□ 2.64
TMEM53-205ENST00000372244 ZNF644Q9H582 1327 aaPredicted RBP31.52■■■□□ 2.64
TMEM53-205ENST00000372244 PLEKHH2Q8IVE3 1493 aa31.52■■■□□ 2.64
TMEM53-205ENST00000372244 SUPT6HQ7KZ85 1726 aaKnown RBP31.5■■■□□ 2.63
TMEM53-205ENST00000372244 APLP2Q06481 763 aa31.5■■■□□ 2.63
TMEM53-205ENST00000372244 ITSN2Q9NZM3 1697 aa31.49■■■□□ 2.63
TMEM53-205ENST00000372244 MYT1LQ9UL68 1186 aa31.47■■■□□ 2.63
TMEM53-205ENST00000372244 SYCP2Q9BX26 1530 aa31.47■■■□□ 2.63
TMEM53-205ENST00000372244 C9orf84Q5VXU9 1444 aa31.45■■■□□ 2.62
TMEM53-205ENST00000372244 HECW2Q9P2P5 1572 aa31.44■■■□□ 2.62
TMEM53-205ENST00000372244 ADAMTSL3P82987 1691 aa31.44■■■□□ 2.62
TMEM53-205ENST00000372244 MBD5Q9P267 1494 aa31.43■■■□□ 2.62
TMEM53-205ENST00000372244 BCORL1Q5H9F3 1711 aa31.42■■■□□ 2.62
TMEM53-205ENST00000372244 SPAG9O60271 1321 aaKnown RBP31.42■■■□□ 2.62
TMEM53-205ENST00000372244 SIGLEC1Q9BZZ2 1709 aa31.41■■■□□ 2.62
TMEM53-205ENST00000372244 DIP2CQ9Y2E4 1556 aa31.38■■■□□ 2.61
TMEM53-205ENST00000372244 RSPH4AQ5TD94 716 aa31.36■■■□□ 2.61
TMEM53-205ENST00000372244 KIDINS220Q9ULH0 1771 aa31.36■■■□□ 2.61
TMEM53-205ENST00000372244 REREQ9P2R6 1566 aa31.34■■■□□ 2.61
TMEM53-205ENST00000372244 MLECQ14165 292 aa31.33■■■□□ 2.61
TMEM53-205ENST00000372244 PTPRMP28827 1452 aa31.33■■■□□ 2.61
TMEM53-205ENST00000372244 ABCA6Q8N139 1617 aa31.33■■■□□ 2.61
TMEM53-205ENST00000372244 CAMSAP2Q08AD1 1489 aa31.32■■■□□ 2.6
TMEM53-205ENST00000372244 MYOM3Q5VTT5 1437 aa31.31■■■□□ 2.6
TMEM53-205ENST00000372244 MIA2Q96PC5 1412 aa31.3■■■□□ 2.6
TMEM53-205ENST00000372244 MADDQ8WXG6 1647 aa31.29■■■□□ 2.6
TMEM53-205ENST00000372244 AGLP35573 1532 aa31.27■■■□□ 2.6
TMEM53-205ENST00000372244 ATP7AQ04656 1500 aa31.27■■■□□ 2.6
TMEM53-205ENST00000372244 RTEL1-TNFRSF6BF6WH68 1400 aa31.27■■■□□ 2.6
TMEM53-205ENST00000372244 INO80Q9ULG1 1556 aaPredicted RBP31.24■■■□□ 2.59
TMEM53-205ENST00000372244 CCDC141Q6ZP82 1450 aa31.23■■■□□ 2.59
TMEM53-205ENST00000372244 ARHGEF5Q12774 1597 aa31.19■■■□□ 2.58
TMEM53-205ENST00000372244 TSPY4P0CV99 314 aa31.19■■■□□ 2.58
TMEM53-205ENST00000372244 TSPY10P0CW01 314 aa31.19■■■□□ 2.58
TMEM53-205ENST00000372244 A2MP01023 1474 aa31.17■■■□□ 2.58
TMEM53-205ENST00000372244 RIMS1Q86UR5 1692 aaKnown RBP31.16■■■□□ 2.58
TMEM53-205ENST00000372244 DHX29Q7Z478 1369 aaKnown RBP31.13■■■□□ 2.57
TMEM53-205ENST00000372244 PLXNC1O60486 1568 aa31.12■■■□□ 2.57
TMEM53-205ENST00000372244 FGD6Q6ZV73 1430 aa31.11■■■□□ 2.57
TMEM53-205ENST00000372244 FER1L4A9Z1Z3 1794 aa31.1■■■□□ 2.57
TMEM53-205ENST00000372244 CEBPAP49715 358 aaPredicted RBP31.07■■■□□ 2.56
TMEM53-205ENST00000372244 ADGBQ8N7X0 1667 aa31.06■■■□□ 2.56
TMEM53-205ENST00000372244 TCOF1Q13428 1488 aaKnown RBP31.05■■■□□ 2.56
TMEM53-205ENST00000372244 PTPN23Q9H3S7 1636 aa31.04■■■□□ 2.56
TMEM53-205ENST00000372244 PLPPR3Q6T4P5 718 aa31.04■■■□□ 2.56
TMEM53-205ENST00000372244 ESF1Q9H501 851 aaKnown RBP31.04■■■□□ 2.56
TMEM53-205ENST00000372244 PPP6R1Q9UPN7 881 aa31.04■■■□□ 2.56
TMEM53-205ENST00000372244 GGT6Q6P531 493 aa31.02■■■□□ 2.56
TMEM53-205ENST00000372244 ABCC5O15440 1437 aa31.02■■■□□ 2.56
TMEM53-205ENST00000372244 MAST1Q9Y2H9 1570 aa31.01■■■□□ 2.56
TMEM53-205ENST00000372244 CNTLNQ9NXG0 1405 aa31.01■■■□□ 2.55
TMEM53-205ENST00000372244 KIF3BO15066 747 aa30.98■■■□□ 2.55
TMEM53-205ENST00000372244 DAPK1P53355 1430 aa30.94■■■□□ 2.54
TMEM53-205ENST00000372244 ZMYM3Q14202 1370 aa30.94■■■□□ 2.54
TMEM53-205ENST00000372244 LMTK3Q96Q04 1460 aa30.93■■■□□ 2.54
TMEM53-205ENST00000372244 SHANK2Q9UPX8 1470 aa30.93■■■□□ 2.54
TMEM53-205ENST00000372244 PPARGC1BQ86YN6 1023 aaKnown RBP30.92■■■□□ 2.54
TMEM53-205ENST00000372244 FAM50AQ14320 339 aaKnown RBP30.9■■■□□ 2.54
TMEM53-205ENST00000372244 DNMT1P26358 1616 aaKnown RBP30.89■■■□□ 2.53
TMEM53-205ENST00000372244 SETD1BQ9UPS6 1966 aaKnown RBP30.88■■■□□ 2.53
TMEM53-205ENST00000372244 RRP7BPQ9NSQ0 103 aa30.87■■■□□ 2.53
TMEM53-205ENST00000372244 C3P01024 1663 aa30.86■■■□□ 2.53
TMEM53-205ENST00000372244 KIF15Q9NS87 1388 aa30.84■■■□□ 2.53
TMEM53-205ENST00000372244 CHIC2Q9UKJ5 165 aa30.84■■■□□ 2.53
TMEM53-205ENST00000372244 MROH2AA6NES4 1674 aa30.83■■■□□ 2.53
TMEM53-205ENST00000372244 CROCC2H7BZ55 1655 aa30.83■■■□□ 2.53
TMEM53-205ENST00000372244 DUOX2Q9NRD8 1548 aa30.82■■■□□ 2.52
TMEM53-205ENST00000372244 HSPA2P54652 639 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms