RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 CD109Q6YHK3 1445 aa24.29■■□□□ 1.48
TMEM53-204ENST00000372243 CFDP1Q9UEE9 299 aaPredicted RBP24.28■■□□□ 1.48
TMEM53-204ENST00000372243 ARHGAP5Q13017 1502 aa24.25■■□□□ 1.47
TMEM53-204ENST00000372243 TCOF1Q13428 1488 aaKnown RBP24.25■■□□□ 1.47
TMEM53-204ENST00000372243 PTPN23Q9H3S7 1636 aa24.24■■□□□ 1.47
TMEM53-204ENST00000372243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.24■■□□□ 1.47
TMEM53-204ENST00000372243 EFCAB2Q5VUJ9 269 aa24.21■■□□□ 1.47
TMEM53-204ENST00000372243 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.47
TMEM53-204ENST00000372243 CFAP74Q9C0B2 1584 aa24.19■■□□□ 1.46
TMEM53-204ENST00000372243 FANCAO15360 1455 aa24.19■■□□□ 1.46
TMEM53-204ENST00000372243 CAMSAP2Q08AD1 1489 aa24.18■■□□□ 1.46
TMEM53-204ENST00000372243 SAMD9LQ8IVG5 1584 aa24.18■■□□□ 1.46
TMEM53-204ENST00000372243 PLEKHH2Q8IVE3 1493 aa24.16■■□□□ 1.46
TMEM53-204ENST00000372243 ZNF777Q9ULD5 760 aaPredicted RBP24.16■■□□□ 1.46
TMEM53-204ENST00000372243 NEO1Q92859 1461 aa24.16■■□□□ 1.46
TMEM53-204ENST00000372243 PPRC1Q5VV67 1664 aaKnown RBP24.16■■□□□ 1.46
TMEM53-204ENST00000372243 TEX14Q8IWB6 1497 aa24.14■■□□□ 1.46
TMEM53-204ENST00000372243 ZNF644Q9H582 1327 aaPredicted RBP24.14■■□□□ 1.46
TMEM53-204ENST00000372243 KIAA1107Q9UPP5 1409 aa24.13■■□□□ 1.45
TMEM53-204ENST00000372243 FAM50AQ14320 339 aaKnown RBP24.13■■□□□ 1.45
TMEM53-204ENST00000372243 TSPOAP1O95153 1857 aa24.12■■□□□ 1.45
TMEM53-204ENST00000372243 ABCC1P33527 1531 aa24.11■■□□□ 1.45
TMEM53-204ENST00000372243 AKNAQ7Z591 1439 aa24.11■■□□□ 1.45
TMEM53-204ENST00000372243 TRHP20396 242 aaPredicted RBP24.11■■□□□ 1.45
TMEM53-204ENST00000372243 ARHGEF5Q12774 1597 aa24.09■■□□□ 1.45
TMEM53-204ENST00000372243 DNMT1P26358 1616 aaKnown RBP24.08■■□□□ 1.45
TMEM53-204ENST00000372243 ADGRL1O94910 1474 aa24.08■■□□□ 1.45
TMEM53-204ENST00000372243 MBD5Q9P267 1494 aa24.08■■□□□ 1.45
TMEM53-204ENST00000372243 RSPH4AQ5TD94 716 aa24.08■■□□□ 1.44
TMEM53-204ENST00000372243 SYCP2Q9BX26 1530 aa24.07■■□□□ 1.44
TMEM53-204ENST00000372243 ARHGEF12Q9NZN5 1544 aa24.05■■□□□ 1.44
TMEM53-204ENST00000372243 HNRNPMP52272 730 aaKnown RBP eCLIP24.03■■□□□ 1.44
TMEM53-204ENST00000372243 DAPK1P53355 1430 aa24.03■■□□□ 1.44
TMEM53-204ENST00000372243 SCAPERQ9BY12 1400 aa24.03■■□□□ 1.44
TMEM53-204ENST00000372243 CCDC141Q6ZP82 1450 aa24.02■■□□□ 1.44
TMEM53-204ENST00000372243 ABCC5O15440 1437 aa24.02■■□□□ 1.44
TMEM53-204ENST00000372243 CROCC2H7BZ55 1655 aa24.01■■□□□ 1.43
TMEM53-204ENST00000372243 SHANK2Q9UPX8 1470 aa23.99■■□□□ 1.43
TMEM53-204ENST00000372243 TRAPPC8Q9Y2L5 1435 aa23.97■■□□□ 1.43
TMEM53-204ENST00000372243 PTPRKQ15262 1439 aa23.97■■□□□ 1.43
TMEM53-204ENST00000372243 DENND4BO75064 1496 aaPredicted RBP23.97■■□□□ 1.43
TMEM53-204ENST00000372243 ZNF518AQ6AHZ1 1483 aa23.97■■□□□ 1.43
TMEM53-204ENST00000372243 POGZQ7Z3K3 1410 aa23.96■■□□□ 1.43
TMEM53-204ENST00000372243 ITGAEP38570 1179 aa23.95■■□□□ 1.43
TMEM53-204ENST00000372243 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.42
TMEM53-204ENST00000372243 TSPY4P0CV99 314 aa23.95■■□□□ 1.42
TMEM53-204ENST00000372243 TSPY10P0CW01 314 aa23.95■■□□□ 1.42
TMEM53-204ENST00000372243 KDM5CP41229 1560 aa23.93■■□□□ 1.42
TMEM53-204ENST00000372243 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
TMEM53-204ENST00000372243 RICTORQ6R327 1708 aa23.93■■□□□ 1.42
TMEM53-204ENST00000372243 C9orf84Q5VXU9 1444 aa23.92■■□□□ 1.42
TMEM53-204ENST00000372243 AFAP1Q8N556 730 aa23.91■■□□□ 1.42
TMEM53-204ENST00000372243 ADGRL2O95490 1459 aa23.91■■□□□ 1.42
TMEM53-204ENST00000372243 ADGBQ8N7X0 1667 aa23.9■■□□□ 1.42
TMEM53-204ENST00000372243 RTEL1-TNFRSF6BF6WH68 1400 aa23.9■■□□□ 1.42
TMEM53-204ENST00000372243 ROCK1Q13464 1354 aa23.9■■□□□ 1.42
TMEM53-204ENST00000372243 FRMPD1Q5SYB0 1578 aa23.88■■□□□ 1.41
TMEM53-204ENST00000372243 INO80Q9ULG1 1556 aaPredicted RBP23.87■■□□□ 1.41
TMEM53-204ENST00000372243 MLH3Q9UHC1 1453 aa23.87■■□□□ 1.41
TMEM53-204ENST00000372243 SPAG9O60271 1321 aaKnown RBP23.87■■□□□ 1.41
TMEM53-204ENST00000372243 COL17A1Q9UMD9 1497 aaPredicted RBP23.86■■□□□ 1.41
TMEM53-204ENST00000372243 ZMYM4Q5VZL5 1548 aa23.86■■□□□ 1.41
TMEM53-204ENST00000372243 ZFYVE16Q7Z3T8 1539 aa23.86■■□□□ 1.41
TMEM53-204ENST00000372243 RAPGEF3O95398 923 aa23.86■■□□□ 1.41
TMEM53-204ENST00000372243 CHIC2Q9UKJ5 165 aa23.86■■□□□ 1.41
TMEM53-204ENST00000372243 NCOA1Q15788 1441 aa23.85■■□□□ 1.41
TMEM53-204ENST00000372243 ANKRD30AQ9BXX3 1397 aa23.85■■□□□ 1.41
TMEM53-204ENST00000372243 PLXNC1O60486 1568 aa23.85■■□□□ 1.41
TMEM53-204ENST00000372243 ATP7AQ04656 1500 aa23.84■■□□□ 1.41
TMEM53-204ENST00000372243 HECW2Q9P2P5 1572 aa23.84■■□□□ 1.41
TMEM53-204ENST00000372243 HFM1A2PYH4 1435 aa23.82■■□□□ 1.4
TMEM53-204ENST00000372243 KDM6BO15054 1643 aa23.82■■□□□ 1.4
TMEM53-204ENST00000372243 KIDINS220Q9ULH0 1771 aa23.82■■□□□ 1.4
TMEM53-204ENST00000372243 MAGI2Q86UL8 1455 aa23.81■■□□□ 1.4
TMEM53-204ENST00000372243 GCC2Q8IWJ2 1684 aa23.79■■□□□ 1.4
TMEM53-204ENST00000372243 NAIPQ13075 1403 aa23.79■■□□□ 1.4
TMEM53-204ENST00000372243 RRP7BPQ9NSQ0 103 aa23.77■■□□□ 1.4
TMEM53-204ENST00000372243 KIF15Q9NS87 1388 aa23.76■■□□□ 1.39
TMEM53-204ENST00000372243 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
TMEM53-204ENST00000372243 DUOX2Q9NRD8 1548 aa23.74■■□□□ 1.39
TMEM53-204ENST00000372243 MYT1LQ9UL68 1186 aa23.74■■□□□ 1.39
TMEM53-204ENST00000372243 ABCA6Q8N139 1617 aa23.72■■□□□ 1.39
TMEM53-204ENST00000372243 DIP2CQ9Y2E4 1556 aa23.71■■□□□ 1.39
TMEM53-204ENST00000372243 ANKRD50Q9ULJ7 1429 aa23.7■■□□□ 1.38
TMEM53-204ENST00000372243 HRCP23327 699 aa23.69■■□□□ 1.38
TMEM53-204ENST00000372243 YEATS2Q9ULM3 1422 aa23.69■■□□□ 1.38
TMEM53-204ENST00000372243 ERBINQ96RT1 1412 aa23.69■■□□□ 1.38
TMEM53-204ENST00000372243 DHX29Q7Z478 1369 aaKnown RBP23.68■■□□□ 1.38
TMEM53-204ENST00000372243 RAB3GAP2Q9H2M9 1393 aa23.68■■□□□ 1.38
TMEM53-204ENST00000372243 ARHGEF40Q8TER5 1519 aa23.68■■□□□ 1.38
TMEM53-204ENST00000372243 A2MP01023 1474 aa23.67■■□□□ 1.38
TMEM53-204ENST00000372243 ACIN1Q9UKV3 1341 aaKnown RBP23.66■■□□□ 1.38
TMEM53-204ENST00000372243 REREQ9P2R6 1566 aa23.66■■□□□ 1.38
TMEM53-204ENST00000372243 ATP10AO60312 1499 aa23.65■■□□□ 1.38
TMEM53-204ENST00000372243 EIF2AK4Q9P2K8 1649 aaKnown RBP23.64■■□□□ 1.38
TMEM53-204ENST00000372243 BCORL1Q5H9F3 1711 aa23.6■■□□□ 1.37
TMEM53-204ENST00000372243 AGLP35573 1532 aa23.57■■□□□ 1.36
TMEM53-204ENST00000372243 UNC13BO14795 1591 aa23.55■■□□□ 1.36
TMEM53-204ENST00000372243 DEPDC5O75140 1603 aa23.55■■□□□ 1.36
TMEM53-204ENST00000372243 RNF17Q9BXT8 1623 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms