RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 MIA2Q96PC5 1412 aa16.67■□□□□ 0.26
LCN1-202ENST00000371781 ABCA9Q8IUA7 1624 aa16.67■□□□□ 0.26
LCN1-202ENST00000371781 PPRC1Q5VV67 1664 aaKnown RBP16.66■□□□□ 0.26
LCN1-202ENST00000371781 MYO5CQ9NQX4 1742 aa16.66■□□□□ 0.26
LCN1-202ENST00000371781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.65■□□□□ 0.26
LCN1-202ENST00000371781 SAMD9LQ8IVG5 1584 aa16.64■□□□□ 0.25
LCN1-202ENST00000371781 PTPRKQ15262 1439 aa16.64■□□□□ 0.25
LCN1-202ENST00000371781 KDM4FA0A1W2PPD8 638 aa16.64■□□□□ 0.25
LCN1-202ENST00000371781 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
LCN1-202ENST00000371781 DNMT1P26358 1616 aaKnown RBP16.61■□□□□ 0.25
LCN1-202ENST00000371781 ZNF644Q9H582 1327 aaPredicted RBP16.6■□□□□ 0.25
LCN1-202ENST00000371781 CROCC2H7BZ55 1655 aa16.59■□□□□ 0.25
LCN1-202ENST00000371781 GLI2P10070 1586 aa16.59■□□□□ 0.25
LCN1-202ENST00000371781 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.24
LCN1-202ENST00000371781 ARAP3Q8WWN8 1544 aa16.58■□□□□ 0.24
LCN1-202ENST00000371781 ARHGAP5Q13017 1502 aa16.56■□□□□ 0.24
LCN1-202ENST00000371781 PLCH2O75038 1416 aa16.56■□□□□ 0.24
LCN1-202ENST00000371781 KCNH8Q96L42 1107 aa16.56■□□□□ 0.24
LCN1-202ENST00000371781 ABCC5O15440 1437 aa16.55■□□□□ 0.24
LCN1-202ENST00000371781 ABCC1P33527 1531 aa16.55■□□□□ 0.24
LCN1-202ENST00000371781 DAPK1P53355 1430 aa16.54■□□□□ 0.24
LCN1-202ENST00000371781 MAP3K4Q9Y6R4 1608 aa16.54■□□□□ 0.24
LCN1-202ENST00000371781 SYCP2Q9BX26 1530 aa16.54■□□□□ 0.24
LCN1-202ENST00000371781 ARHGEF12Q9NZN5 1544 aa16.54■□□□□ 0.24
LCN1-202ENST00000371781 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
LCN1-202ENST00000371781 ARHGEF5Q12774 1597 aa16.53■□□□□ 0.24
LCN1-202ENST00000371781 ITGAEP38570 1179 aa16.52■□□□□ 0.24
LCN1-202ENST00000371781 CFDP1Q9UEE9 299 aaPredicted RBP16.52■□□□□ 0.24
LCN1-202ENST00000371781 GCC2Q8IWJ2 1684 aa16.5■□□□□ 0.23
LCN1-202ENST00000371781 ADGRL1O94910 1474 aa16.49■□□□□ 0.23
LCN1-202ENST00000371781 ADGBQ8N7X0 1667 aa16.49■□□□□ 0.23
LCN1-202ENST00000371781 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
LCN1-202ENST00000371781 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
LCN1-202ENST00000371781 AKNAQ7Z591 1439 aa16.47■□□□□ 0.23
LCN1-202ENST00000371781 FANCAO15360 1455 aa16.47■□□□□ 0.23
LCN1-202ENST00000371781 ZNF777Q9ULD5 760 aaPredicted RBP16.46■□□□□ 0.23
LCN1-202ENST00000371781 ADGRL2O95490 1459 aa16.46■□□□□ 0.23
LCN1-202ENST00000371781 CCDC141Q6ZP82 1450 aa16.46■□□□□ 0.23
LCN1-202ENST00000371781 NAIPQ13075 1403 aa16.45■□□□□ 0.22
LCN1-202ENST00000371781 MAST1Q9Y2H9 1570 aa16.45■□□□□ 0.22
LCN1-202ENST00000371781 HFM1A2PYH4 1435 aa16.45■□□□□ 0.22
LCN1-202ENST00000371781 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
LCN1-202ENST00000371781 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
LCN1-202ENST00000371781 PLEKHH2Q8IVE3 1493 aa16.43■□□□□ 0.22
LCN1-202ENST00000371781 TRAPPC8Q9Y2L5 1435 aa16.43■□□□□ 0.22
LCN1-202ENST00000371781 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
LCN1-202ENST00000371781 TEX14Q8IWB6 1497 aa16.42■□□□□ 0.22
LCN1-202ENST00000371781 RAB3GAP2Q9H2M9 1393 aa16.42■□□□□ 0.22
LCN1-202ENST00000371781 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
LCN1-202ENST00000371781 HNRNPMP52272 730 aaKnown RBP eCLIP16.41■□□□□ 0.22
LCN1-202ENST00000371781 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
LCN1-202ENST00000371781 ROCK1Q13464 1354 aa16.4■□□□□ 0.22
LCN1-202ENST00000371781 INO80Q9ULG1 1556 aaPredicted RBP16.39■□□□□ 0.21
LCN1-202ENST00000371781 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
LCN1-202ENST00000371781 CHIC2Q9UKJ5 165 aa16.39■□□□□ 0.21
LCN1-202ENST00000371781 ZFYVE16Q7Z3T8 1539 aa16.39■□□□□ 0.21
LCN1-202ENST00000371781 PLXNC1O60486 1568 aa16.38■□□□□ 0.21
LCN1-202ENST00000371781 HECW2Q9P2P5 1572 aa16.38■□□□□ 0.21
LCN1-202ENST00000371781 NCOA1Q15788 1441 aa16.37■□□□□ 0.21
LCN1-202ENST00000371781 NEO1Q92859 1461 aa16.37■□□□□ 0.21
LCN1-202ENST00000371781 FRMPD1Q5SYB0 1578 aa16.37■□□□□ 0.21
LCN1-202ENST00000371781 ILDR1Q86SU0 546 aaPredicted RBP16.36■□□□□ 0.21
LCN1-202ENST00000371781 KDM5CP41229 1560 aa16.35■□□□□ 0.21
LCN1-202ENST00000371781 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
LCN1-202ENST00000371781 RICTORQ6R327 1708 aa16.35■□□□□ 0.21
LCN1-202ENST00000371781 SCAPERQ9BY12 1400 aa16.35■□□□□ 0.21
LCN1-202ENST00000371781 DHX57Q6P158 1386 aaKnown RBP16.34■□□□□ 0.21
LCN1-202ENST00000371781 POGZQ7Z3K3 1410 aa16.34■□□□□ 0.21
LCN1-202ENST00000371781 KIDINS220Q9ULH0 1771 aa16.32■□□□□ 0.2
LCN1-202ENST00000371781 ATP7AQ04656 1500 aa16.31■□□□□ 0.2
LCN1-202ENST00000371781 DENND4BO75064 1496 aaPredicted RBP16.3■□□□□ 0.2
LCN1-202ENST00000371781 ANKRD30AQ9BXX3 1397 aa16.29■□□□□ 0.2
LCN1-202ENST00000371781 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
LCN1-202ENST00000371781 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
LCN1-202ENST00000371781 ABCA6Q8N139 1617 aa16.28■□□□□ 0.2
LCN1-202ENST00000371781 AFAP1Q8N556 730 aa16.28■□□□□ 0.2
LCN1-202ENST00000371781 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.19
LCN1-202ENST00000371781 RSPH4AQ5TD94 716 aa16.26■□□□□ 0.19
LCN1-202ENST00000371781 ZMYM4Q5VZL5 1548 aa16.25■□□□□ 0.19
LCN1-202ENST00000371781 ANKRD50Q9ULJ7 1429 aa16.25■□□□□ 0.19
LCN1-202ENST00000371781 HRCP23327 699 aa16.24■□□□□ 0.19
LCN1-202ENST00000371781 UNC13BO14795 1591 aa16.24■□□□□ 0.19
LCN1-202ENST00000371781 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
LCN1-202ENST00000371781 MLH3Q9UHC1 1453 aa16.23■□□□□ 0.19
LCN1-202ENST00000371781 DIP2CQ9Y2E4 1556 aa16.23■□□□□ 0.19
LCN1-202ENST00000371781 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
LCN1-202ENST00000371781 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
LCN1-202ENST00000371781 KDM5DQ9BY66 1539 aa16.23■□□□□ 0.19
LCN1-202ENST00000371781 PZPP20742 1482 aa16.22■□□□□ 0.19
LCN1-202ENST00000371781 SPAG9O60271 1321 aaKnown RBP16.22■□□□□ 0.19
LCN1-202ENST00000371781 MAGI2Q86UL8 1455 aa16.22■□□□□ 0.19
LCN1-202ENST00000371781 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
LCN1-202ENST00000371781 ERBINQ96RT1 1412 aa16.19■□□□□ 0.18
LCN1-202ENST00000371781 DEPDC5O75140 1603 aa16.19■□□□□ 0.18
LCN1-202ENST00000371781 RAPGEF3O95398 923 aa16.19■□□□□ 0.18
LCN1-202ENST00000371781 YEATS2Q9ULM3 1422 aa16.19■□□□□ 0.18
LCN1-202ENST00000371781 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
LCN1-202ENST00000371781 EIF2AK4Q9P2K8 1649 aaKnown RBP16.18■□□□□ 0.18
LCN1-202ENST00000371781 SIGLEC1Q9BZZ2 1709 aa16.17■□□□□ 0.18
LCN1-202ENST00000371781 BCORL1Q5H9F3 1711 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms