RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 NCOA2Q15596 1464 aa24.87■■□□□ 1.57
PFDN4-201ENST00000371419 ARHGAP5Q13017 1502 aa24.85■■□□□ 1.57
PFDN4-201ENST00000371419 GPATCH8Q9UKJ3 1502 aaKnown RBP24.85■■□□□ 1.57
PFDN4-201ENST00000371419 PREX2Q70Z35 1606 aa24.85■■□□□ 1.57
PFDN4-201ENST00000371419 CDC42BPAQ5VT25 1732 aa24.84■■□□□ 1.57
PFDN4-201ENST00000371419 AKNAQ7Z591 1439 aa24.83■■□□□ 1.57
PFDN4-201ENST00000371419 CDC42BPBQ9Y5S2 1711 aa24.83■■□□□ 1.57
PFDN4-201ENST00000371419 COL17A1Q9UMD9 1497 aaPredicted RBP24.82■■□□□ 1.56
PFDN4-201ENST00000371419 CFDP1Q9UEE9 299 aaPredicted RBP24.79■■□□□ 1.56
PFDN4-201ENST00000371419 ITSN2Q9NZM3 1697 aa24.77■■□□□ 1.56
PFDN4-201ENST00000371419 ADGRL1O94910 1474 aa24.77■■□□□ 1.56
PFDN4-201ENST00000371419 ZNF777Q9ULD5 760 aaPredicted RBP24.74■■□□□ 1.55
PFDN4-201ENST00000371419 SCAPERQ9BY12 1400 aa24.73■■□□□ 1.55
PFDN4-201ENST00000371419 DENND4BO75064 1496 aaPredicted RBP24.73■■□□□ 1.55
PFDN4-201ENST00000371419 RAPGEF3O95398 923 aa24.72■■□□□ 1.55
PFDN4-201ENST00000371419 MYOM3Q5VTT5 1437 aa24.7■■□□□ 1.54
PFDN4-201ENST00000371419 ABCC1P33527 1531 aa24.69■■□□□ 1.54
PFDN4-201ENST00000371419 SAMD9LQ8IVG5 1584 aa24.69■■□□□ 1.54
PFDN4-201ENST00000371419 PLEKHH2Q8IVE3 1493 aa24.67■■□□□ 1.54
PFDN4-201ENST00000371419 POGZQ7Z3K3 1410 aa24.66■■□□□ 1.54
PFDN4-201ENST00000371419 FRMPD1Q5SYB0 1578 aa24.66■■□□□ 1.54
PFDN4-201ENST00000371419 RICTORQ6R327 1708 aa24.66■■□□□ 1.54
PFDN4-201ENST00000371419 PPARGC1BQ86YN6 1023 aaKnown RBP24.65■■□□□ 1.54
PFDN4-201ENST00000371419 MIA2Q96PC5 1412 aa24.65■■□□□ 1.54
PFDN4-201ENST00000371419 KIAA1107Q9UPP5 1409 aa24.65■■□□□ 1.54
PFDN4-201ENST00000371419 ZNF644Q9H582 1327 aaPredicted RBP24.65■■□□□ 1.54
PFDN4-201ENST00000371419 ARHGEF12Q9NZN5 1544 aa24.64■■□□□ 1.54
PFDN4-201ENST00000371419 ZNF518AQ6AHZ1 1483 aa24.63■■□□□ 1.53
PFDN4-201ENST00000371419 SYCP2Q9BX26 1530 aa24.62■■□□□ 1.53
PFDN4-201ENST00000371419 HNRNPMP52272 730 aaKnown RBP eCLIP24.61■■□□□ 1.53
PFDN4-201ENST00000371419 CAMSAP2Q08AD1 1489 aa24.61■■□□□ 1.53
PFDN4-201ENST00000371419 TRAPPC8Q9Y2L5 1435 aa24.6■■□□□ 1.53
PFDN4-201ENST00000371419 AFAP1Q8N556 730 aa24.6■■□□□ 1.53
PFDN4-201ENST00000371419 ZMYM4Q5VZL5 1548 aa24.59■■□□□ 1.53
PFDN4-201ENST00000371419 FGD6Q6ZV73 1430 aa24.58■■□□□ 1.53
PFDN4-201ENST00000371419 KDM5CP41229 1560 aa24.56■■□□□ 1.52
PFDN4-201ENST00000371419 MAGI2Q86UL8 1455 aa24.55■■□□□ 1.52
PFDN4-201ENST00000371419 MBD5Q9P267 1494 aa24.55■■□□□ 1.52
PFDN4-201ENST00000371419 PTPN23Q9H3S7 1636 aa24.53■■□□□ 1.52
PFDN4-201ENST00000371419 RSPH4AQ5TD94 716 aa24.52■■□□□ 1.52
PFDN4-201ENST00000371419 TCOF1Q13428 1488 aaKnown RBP24.5■■□□□ 1.51
PFDN4-201ENST00000371419 MLH3Q9UHC1 1453 aa24.5■■□□□ 1.51
PFDN4-201ENST00000371419 ZFYVE16Q7Z3T8 1539 aa24.5■■□□□ 1.51
PFDN4-201ENST00000371419 MYT1LQ9UL68 1186 aa24.5■■□□□ 1.51
PFDN4-201ENST00000371419 CCDC141Q6ZP82 1450 aa24.49■■□□□ 1.51
PFDN4-201ENST00000371419 ARHGEF5Q12774 1597 aa24.49■■□□□ 1.51
PFDN4-201ENST00000371419 HECW2Q9P2P5 1572 aa24.49■■□□□ 1.51
PFDN4-201ENST00000371419 SPAG9O60271 1321 aaKnown RBP24.49■■□□□ 1.51
PFDN4-201ENST00000371419 ARHGEF40Q8TER5 1519 aa24.49■■□□□ 1.51
PFDN4-201ENST00000371419 YEATS2Q9ULM3 1422 aa24.48■■□□□ 1.51
PFDN4-201ENST00000371419 FAM50AQ14320 339 aaKnown RBP24.44■■□□□ 1.5
PFDN4-201ENST00000371419 TSPY4P0CV99 314 aa24.43■■□□□ 1.5
PFDN4-201ENST00000371419 TSPY10P0CW01 314 aa24.43■■□□□ 1.5
PFDN4-201ENST00000371419 KIDINS220Q9ULH0 1771 aa24.43■■□□□ 1.5
PFDN4-201ENST00000371419 ATP7AQ04656 1500 aa24.42■■□□□ 1.5
PFDN4-201ENST00000371419 ATP10AO60312 1499 aa24.42■■□□□ 1.5
PFDN4-201ENST00000371419 INO80Q9ULG1 1556 aaPredicted RBP24.41■■□□□ 1.5
PFDN4-201ENST00000371419 RTEL1-TNFRSF6BF6WH68 1400 aa24.41■■□□□ 1.5
PFDN4-201ENST00000371419 DIP2CQ9Y2E4 1556 aa24.39■■□□□ 1.5
PFDN4-201ENST00000371419 ABCA6Q8N139 1617 aa24.39■■□□□ 1.49
PFDN4-201ENST00000371419 ABCC5O15440 1437 aa24.39■■□□□ 1.49
PFDN4-201ENST00000371419 DNMT1P26358 1616 aaKnown RBP24.38■■□□□ 1.49
PFDN4-201ENST00000371419 DAPK1P53355 1430 aa24.37■■□□□ 1.49
PFDN4-201ENST00000371419 C9orf84Q5VXU9 1444 aa24.37■■□□□ 1.49
PFDN4-201ENST00000371419 RRBP1Q9P2E9 1410 aaKnown RBP24.35■■□□□ 1.49
PFDN4-201ENST00000371419 MAST1Q9Y2H9 1570 aa24.35■■□□□ 1.49
PFDN4-201ENST00000371419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.35■■□□□ 1.49
PFDN4-201ENST00000371419 SHANK2Q9UPX8 1470 aa24.34■■□□□ 1.49
PFDN4-201ENST00000371419 ARID4BQ4LE39 1312 aaPredicted RBP24.33■■□□□ 1.49
PFDN4-201ENST00000371419 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.48
PFDN4-201ENST00000371419 REREQ9P2R6 1566 aa24.32■■□□□ 1.48
PFDN4-201ENST00000371419 A2MP01023 1474 aa24.29■■□□□ 1.48
PFDN4-201ENST00000371419 ADGBQ8N7X0 1667 aa24.29■■□□□ 1.48
PFDN4-201ENST00000371419 SIGLEC1Q9BZZ2 1709 aa24.28■■□□□ 1.48
PFDN4-201ENST00000371419 CHIC2Q9UKJ5 165 aa24.26■■□□□ 1.47
PFDN4-201ENST00000371419 AGLP35573 1532 aa24.25■■□□□ 1.47
PFDN4-201ENST00000371419 PLXNC1O60486 1568 aa24.25■■□□□ 1.47
PFDN4-201ENST00000371419 DHX29Q7Z478 1369 aaKnown RBP24.25■■□□□ 1.47
PFDN4-201ENST00000371419 ANKRD30AQ9BXX3 1397 aa24.23■■□□□ 1.47
PFDN4-201ENST00000371419 ITGAEP38570 1179 aa24.23■■□□□ 1.47
PFDN4-201ENST00000371419 PTPRKQ15262 1439 aa24.22■■□□□ 1.47
PFDN4-201ENST00000371419 ADGRL2O95490 1459 aa24.21■■□□□ 1.47
PFDN4-201ENST00000371419 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
PFDN4-201ENST00000371419 KIF15Q9NS87 1388 aa24.21■■□□□ 1.47
PFDN4-201ENST00000371419 KDM4FA0A1W2PPD8 638 aa24.2■■□□□ 1.47
PFDN4-201ENST00000371419 MLECQ14165 292 aa24.2■■□□□ 1.47
PFDN4-201ENST00000371419 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.47
PFDN4-201ENST00000371419 NCOA1Q15788 1441 aa24.2■■□□□ 1.46
PFDN4-201ENST00000371419 DUOX2Q9NRD8 1548 aa24.18■■□□□ 1.46
PFDN4-201ENST00000371419 ROCK1Q13464 1354 aa24.16■■□□□ 1.46
PFDN4-201ENST00000371419 ADAMTSL3P82987 1691 aa24.15■■□□□ 1.46
PFDN4-201ENST00000371419 KIF3BO15066 747 aa24.13■■□□□ 1.45
PFDN4-201ENST00000371419 ERBINQ96RT1 1412 aa24.12■■□□□ 1.45
PFDN4-201ENST00000371419 GGT6Q6P531 493 aa24.1■■□□□ 1.45
PFDN4-201ENST00000371419 MADDQ8WXG6 1647 aa24.1■■□□□ 1.45
PFDN4-201ENST00000371419 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
PFDN4-201ENST00000371419 FER1L4A9Z1Z3 1794 aa24.07■■□□□ 1.44
PFDN4-201ENST00000371419 ANKRD50Q9ULJ7 1429 aa24.06■■□□□ 1.44
PFDN4-201ENST00000371419 ESF1Q9H501 851 aaKnown RBP24.06■■□□□ 1.44
PFDN4-201ENST00000371419 PPP6R1Q9UPN7 881 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms