RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 SCAPERQ9BY12 1400 aa24.72■■□□□ 1.55
SS18L1-202ENST00000370848 CDK11AQ9UQ88 783 aaPredicted RBP24.72■■□□□ 1.55
SS18L1-202ENST00000370848 CASKIN1Q8WXD9 1431 aa24.7■■□□□ 1.55
SS18L1-202ENST00000370848 KDM5CP41229 1560 aa24.7■■□□□ 1.54
SS18L1-202ENST00000370848 CCDC18Q5T9S5 1454 aa24.69■■□□□ 1.54
SS18L1-202ENST00000370848 PCF11O94913 1555 aaKnown RBP24.68■■□□□ 1.54
SS18L1-202ENST00000370848 RIMS1Q86UR5 1692 aaKnown RBP24.68■■□□□ 1.54
SS18L1-202ENST00000370848 CLIP1P30622 1438 aa24.68■■□□□ 1.54
SS18L1-202ENST00000370848 ZNF518AQ6AHZ1 1483 aa24.66■■□□□ 1.54
SS18L1-202ENST00000370848 LMTK3Q96Q04 1460 aa24.66■■□□□ 1.54
SS18L1-202ENST00000370848 EFCAB2Q5VUJ9 269 aa24.65■■□□□ 1.54
SS18L1-202ENST00000370848 CDC42BPBQ9Y5S2 1711 aa24.64■■□□□ 1.54
SS18L1-202ENST00000370848 PREX2Q70Z35 1606 aa24.64■■□□□ 1.53
SS18L1-202ENST00000370848 ARID4BQ4LE39 1312 aaPredicted RBP24.63■■□□□ 1.53
SS18L1-202ENST00000370848 ILDR1Q86SU0 546 aaPredicted RBP24.63■■□□□ 1.53
SS18L1-202ENST00000370848 ATP10AO60312 1499 aa24.63■■□□□ 1.53
SS18L1-202ENST00000370848 FYCO1Q9BQS8 1478 aa24.63■■□□□ 1.53
SS18L1-202ENST00000370848 REREQ9P2R6 1566 aa24.63■■□□□ 1.53
SS18L1-202ENST00000370848 ARHGEF12Q9NZN5 1544 aa24.62■■□□□ 1.53
SS18L1-202ENST00000370848 C9orf84Q5VXU9 1444 aa24.61■■□□□ 1.53
SS18L1-202ENST00000370848 ARHGAP5Q13017 1502 aa24.61■■□□□ 1.53
SS18L1-202ENST00000370848 FER1L4A9Z1Z3 1794 aa24.59■■□□□ 1.53
SS18L1-202ENST00000370848 ABCC1P33527 1531 aa24.57■■□□□ 1.52
SS18L1-202ENST00000370848 ATP1B4Q9UN42 357 aaPredicted RBP24.56■■□□□ 1.52
SS18L1-202ENST00000370848 MLH3Q9UHC1 1453 aa24.56■■□□□ 1.52
SS18L1-202ENST00000370848 DIP2CQ9Y2E4 1556 aa24.55■■□□□ 1.52
SS18L1-202ENST00000370848 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
SS18L1-202ENST00000370848 CDC42BPAQ5VT25 1732 aa24.54■■□□□ 1.52
SS18L1-202ENST00000370848 ITSN2Q9NZM3 1697 aa24.53■■□□□ 1.52
SS18L1-202ENST00000370848 ABCA6Q8N139 1617 aa24.5■■□□□ 1.51
SS18L1-202ENST00000370848 AGLP35573 1532 aa24.49■■□□□ 1.51
SS18L1-202ENST00000370848 AFAP1Q8N556 730 aa24.46■■□□□ 1.51
SS18L1-202ENST00000370848 TRAPPC8Q9Y2L5 1435 aa24.45■■□□□ 1.51
SS18L1-202ENST00000370848 KIDINS220Q9ULH0 1771 aa24.44■■□□□ 1.5
SS18L1-202ENST00000370848 PREX1Q8TCU6 1659 aa24.43■■□□□ 1.5
SS18L1-202ENST00000370848 CEP162Q5TB80 1403 aa24.43■■□□□ 1.5
SS18L1-202ENST00000370848 SAMD9LQ8IVG5 1584 aa24.42■■□□□ 1.5
SS18L1-202ENST00000370848 GPATCH8Q9UKJ3 1502 aaKnown RBP24.41■■□□□ 1.5
SS18L1-202ENST00000370848 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
SS18L1-202ENST00000370848 MLECQ14165 292 aa24.36■■□□□ 1.49
SS18L1-202ENST00000370848 FBXO41Q8TF61 875 aa24.35■■□□□ 1.49
SS18L1-202ENST00000370848 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
SS18L1-202ENST00000370848 PLEKHH2Q8IVE3 1493 aa24.33■■□□□ 1.49
SS18L1-202ENST00000370848 SETD1BQ9UPS6 1966 aaKnown RBP24.33■■□□□ 1.49
SS18L1-202ENST00000370848 C3P01024 1663 aa24.33■■□□□ 1.49
SS18L1-202ENST00000370848 INO80Q9ULG1 1556 aaPredicted RBP24.33■■□□□ 1.48
SS18L1-202ENST00000370848 PLXNC1O60486 1568 aa24.31■■□□□ 1.48
SS18L1-202ENST00000370848 HSPA2P54652 639 aa24.3■■□□□ 1.48
SS18L1-202ENST00000370848 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
SS18L1-202ENST00000370848 MROH2AA6NES4 1674 aa24.29■■□□□ 1.48
SS18L1-202ENST00000370848 CNTLNQ9NXG0 1405 aa24.28■■□□□ 1.48
SS18L1-202ENST00000370848 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
SS18L1-202ENST00000370848 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
SS18L1-202ENST00000370848 STRCQ7RTU9 1775 aa24.25■■□□□ 1.47
SS18L1-202ENST00000370848 UHRF1BP1Q6BDS2 1440 aa24.25■■□□□ 1.47
SS18L1-202ENST00000370848 MTUS2Q5JR59 1369 aa24.24■■□□□ 1.47
SS18L1-202ENST00000370848 CEBPAP49715 358 aaPredicted RBP24.23■■□□□ 1.47
SS18L1-202ENST00000370848 CCNB3Q8WWL7 1395 aa24.23■■□□□ 1.47
SS18L1-202ENST00000370848 SPAG9O60271 1321 aaKnown RBP24.2■■□□□ 1.46
SS18L1-202ENST00000370848 MBD5Q9P267 1494 aa24.19■■□□□ 1.46
SS18L1-202ENST00000370848 NPATQ14207 1427 aa24.19■■□□□ 1.46
SS18L1-202ENST00000370848 CFDP1Q9UEE9 299 aaPredicted RBP24.19■■□□□ 1.46
SS18L1-202ENST00000370848 MYT1LQ9UL68 1186 aa24.19■■□□□ 1.46
SS18L1-202ENST00000370848 ADGBQ8N7X0 1667 aa24.18■■□□□ 1.46
SS18L1-202ENST00000370848 PLPPR3Q6T4P5 718 aa24.18■■□□□ 1.46
SS18L1-202ENST00000370848 A2MP01023 1474 aa24.17■■□□□ 1.46
SS18L1-202ENST00000370848 HNRNPMP52272 730 aaKnown RBP eCLIP24.16■■□□□ 1.46
SS18L1-202ENST00000370848 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
SS18L1-202ENST00000370848 ZNF777Q9ULD5 760 aaPredicted RBP24.15■■□□□ 1.46
SS18L1-202ENST00000370848 RTEL1-TNFRSF6BF6WH68 1400 aa24.15■■□□□ 1.46
SS18L1-202ENST00000370848 PTPRTO14522 1441 aa24.12■■□□□ 1.45
SS18L1-202ENST00000370848 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
SS18L1-202ENST00000370848 DMRT2Q9Y5R5 561 aa24.11■■□□□ 1.45
SS18L1-202ENST00000370848 ZNF142P52746 1687 aaPredicted RBP24.1■■□□□ 1.45
SS18L1-202ENST00000370848 ESF1Q9H501 851 aaKnown RBP24.09■■□□□ 1.45
SS18L1-202ENST00000370848 CLTCQ00610 1675 aaKnown RBP24.08■■□□□ 1.45
SS18L1-202ENST00000370848 NCOA2Q15596 1464 aa24.08■■□□□ 1.45
SS18L1-202ENST00000370848 ZMYM3Q14202 1370 aa24.08■■□□□ 1.45
SS18L1-202ENST00000370848 CERKQ8TCT0 537 aa24.08■■□□□ 1.45
SS18L1-202ENST00000370848 NCOA1Q15788 1441 aa24.08■■□□□ 1.44
SS18L1-202ENST00000370848 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
SS18L1-202ENST00000370848 PPP6R1Q9UPN7 881 aa24.07■■□□□ 1.44
SS18L1-202ENST00000370848 ZNF644Q9H582 1327 aaPredicted RBP24.06■■□□□ 1.44
SS18L1-202ENST00000370848 CCDC141Q6ZP82 1450 aa24.05■■□□□ 1.44
SS18L1-202ENST00000370848 ARHGEF5Q12774 1597 aa24.04■■□□□ 1.44
SS18L1-202ENST00000370848 MYO3AQ8NEV4 1616 aa24.04■■□□□ 1.44
SS18L1-202ENST00000370848 CAMSAP2Q08AD1 1489 aa24.04■■□□□ 1.44
SS18L1-202ENST00000370848 MAP3K1Q13233 1512 aa24.04■■□□□ 1.44
SS18L1-202ENST00000370848 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
SS18L1-202ENST00000370848 DHX29Q7Z478 1369 aaKnown RBP24.02■■□□□ 1.44
SS18L1-202ENST00000370848 PLA2R1Q13018 1463 aa24■■□□□ 1.43
SS18L1-202ENST00000370848 CAMSAP1Q5T5Y3 1602 aa23.99■■□□□ 1.43
SS18L1-202ENST00000370848 LTBP4Q8N2S1 1624 aa23.99■■□□□ 1.43
SS18L1-202ENST00000370848 RSPH4AQ5TD94 716 aa23.99■■□□□ 1.43
SS18L1-202ENST00000370848 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
SS18L1-202ENST00000370848 CEP170BQ9Y4F5 1589 aaPredicted RBP23.99■■□□□ 1.43
SS18L1-202ENST00000370848 IQSEC2Q5JU85 1478 aa23.97■■□□□ 1.43
SS18L1-202ENST00000370848 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.43
SS18L1-202ENST00000370848 TCOF1Q13428 1488 aaKnown RBP23.95■■□□□ 1.42
SS18L1-202ENST00000370848 KDM5DQ9BY66 1539 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms