RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 ZFYVE16Q7Z3T8 1539 aa21.61■■□□□ 1.05
RPF1-201ENST00000370654 POGZQ7Z3K3 1410 aa21.61■■□□□ 1.05
RPF1-201ENST00000370654 MYO5CQ9NQX4 1742 aa21.6■■□□□ 1.05
RPF1-201ENST00000370654 PCF11O94913 1555 aaKnown RBP21.6■■□□□ 1.05
RPF1-201ENST00000370654 CDK11AQ9UQ88 783 aaPredicted RBP21.6■■□□□ 1.05
RPF1-201ENST00000370654 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
RPF1-201ENST00000370654 RIMS1Q86UR5 1692 aaKnown RBP21.58■■□□□ 1.04
RPF1-201ENST00000370654 CASKIN1Q8WXD9 1431 aa21.56■■□□□ 1.04
RPF1-201ENST00000370654 MAGI2Q86UL8 1455 aa21.55■■□□□ 1.04
RPF1-201ENST00000370654 MLECQ14165 292 aa21.54■■□□□ 1.04
RPF1-201ENST00000370654 AFAP1Q8N556 730 aa21.54■■□□□ 1.04
RPF1-201ENST00000370654 ARHGAP5Q13017 1502 aa21.54■■□□□ 1.04
RPF1-201ENST00000370654 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
RPF1-201ENST00000370654 CLIP1P30622 1438 aa21.53■■□□□ 1.04
RPF1-201ENST00000370654 CDC42BPBQ9Y5S2 1711 aa21.51■■□□□ 1.03
RPF1-201ENST00000370654 LMTK3Q96Q04 1460 aa21.51■■□□□ 1.03
RPF1-201ENST00000370654 ATP10AO60312 1499 aa21.5■■□□□ 1.03
RPF1-201ENST00000370654 ARHGEF12Q9NZN5 1544 aa21.48■■□□□ 1.03
RPF1-201ENST00000370654 CCDC18Q5T9S5 1454 aa21.48■■□□□ 1.03
RPF1-201ENST00000370654 KDM5CP41229 1560 aa21.46■■□□□ 1.03
RPF1-201ENST00000370654 ZNF518AQ6AHZ1 1483 aa21.46■■□□□ 1.03
RPF1-201ENST00000370654 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
RPF1-201ENST00000370654 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.02
RPF1-201ENST00000370654 PREX2Q70Z35 1606 aa21.45■■□□□ 1.02
RPF1-201ENST00000370654 TRAPPC8Q9Y2L5 1435 aa21.45■■□□□ 1.02
RPF1-201ENST00000370654 HSPA2P54652 639 aa21.44■■□□□ 1.02
RPF1-201ENST00000370654 FER1L4A9Z1Z3 1794 aa21.43■■□□□ 1.02
RPF1-201ENST00000370654 ABCC1P33527 1531 aa21.41■■□□□ 1.02
RPF1-201ENST00000370654 CDC42BPAQ5VT25 1732 aa21.41■■□□□ 1.02
RPF1-201ENST00000370654 DIP2CQ9Y2E4 1556 aa21.41■■□□□ 1.02
RPF1-201ENST00000370654 CEBPAP49715 358 aaPredicted RBP21.4■■□□□ 1.02
RPF1-201ENST00000370654 ABCA6Q8N139 1617 aa21.39■■□□□ 1.01
RPF1-201ENST00000370654 MYT1LQ9UL68 1186 aa21.38■■□□□ 1.01
RPF1-201ENST00000370654 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
RPF1-201ENST00000370654 MLH3Q9UHC1 1453 aa21.37■■□□□ 1.01
RPF1-201ENST00000370654 GPATCH8Q9UKJ3 1502 aaKnown RBP21.36■■□□□ 1.01
RPF1-201ENST00000370654 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
RPF1-201ENST00000370654 SAMD9LQ8IVG5 1584 aa21.34■■□□□ 1.01
RPF1-201ENST00000370654 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1
RPF1-201ENST00000370654 REREQ9P2R6 1566 aa21.32■■□□□ 1
RPF1-201ENST00000370654 HNRNPMP52272 730 aaKnown RBP eCLIP21.31■■□□□ 1
RPF1-201ENST00000370654 SYCP2Q9BX26 1530 aa21.3■■□□□ 1
RPF1-201ENST00000370654 AGLP35573 1532 aa21.27■□□□□ 0.99
RPF1-201ENST00000370654 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
RPF1-201ENST00000370654 MTUS2Q5JR59 1369 aa21.25■□□□□ 0.99
RPF1-201ENST00000370654 FBXO41Q8TF61 875 aa21.24■□□□□ 0.99
RPF1-201ENST00000370654 CFDP1Q9UEE9 299 aaPredicted RBP21.24■□□□□ 0.99
RPF1-201ENST00000370654 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
RPF1-201ENST00000370654 ZNF644Q9H582 1327 aaPredicted RBP21.24■□□□□ 0.99
RPF1-201ENST00000370654 PREX1Q8TCU6 1659 aa21.22■□□□□ 0.99
RPF1-201ENST00000370654 SPAG9O60271 1321 aaKnown RBP21.22■□□□□ 0.99
RPF1-201ENST00000370654 C3P01024 1663 aa21.22■□□□□ 0.99
RPF1-201ENST00000370654 KIAA1107Q9UPP5 1409 aa21.21■□□□□ 0.99
RPF1-201ENST00000370654 TIAM1Q13009 1591 aa21.21■□□□□ 0.99
RPF1-201ENST00000370654 LOC105371045A0A1W2PR82 267 aa21.2■□□□□ 0.98
RPF1-201ENST00000370654 ATP7AQ04656 1500 aa21.17■□□□□ 0.98
RPF1-201ENST00000370654 INO80Q9ULG1 1556 aaPredicted RBP21.17■□□□□ 0.98
RPF1-201ENST00000370654 EHBP1L1Q8N3D4 1523 aa21.16■□□□□ 0.98
RPF1-201ENST00000370654 SUPT6HQ7KZ85 1726 aaKnown RBP21.16■□□□□ 0.98
RPF1-201ENST00000370654 STRCQ7RTU9 1775 aa21.16■□□□□ 0.98
RPF1-201ENST00000370654 UHRF1BP1Q6BDS2 1440 aa21.15■□□□□ 0.98
RPF1-201ENST00000370654 PLEKHH2Q8IVE3 1493 aa21.14■□□□□ 0.98
RPF1-201ENST00000370654 MBD5Q9P267 1494 aa21.14■□□□□ 0.98
RPF1-201ENST00000370654 SETD1BQ9UPS6 1966 aaKnown RBP21.13■□□□□ 0.97
RPF1-201ENST00000370654 PLXNC1O60486 1568 aa21.12■□□□□ 0.97
RPF1-201ENST00000370654 ESF1Q9H501 851 aaKnown RBP21.12■□□□□ 0.97
RPF1-201ENST00000370654 A2MP01023 1474 aa21.12■□□□□ 0.97
RPF1-201ENST00000370654 ZMYM3Q14202 1370 aa21.09■□□□□ 0.97
RPF1-201ENST00000370654 CNTLNQ9NXG0 1405 aa21.09■□□□□ 0.97
RPF1-201ENST00000370654 NCOA2Q15596 1464 aa21.09■□□□□ 0.97
RPF1-201ENST00000370654 CERKQ8TCT0 537 aa21.09■□□□□ 0.97
RPF1-201ENST00000370654 CLTCQ00610 1675 aaKnown RBP21.06■□□□□ 0.96
RPF1-201ENST00000370654 GGT6Q6P531 493 aa21.06■□□□□ 0.96
RPF1-201ENST00000370654 MROH2AA6NES4 1674 aa21.05■□□□□ 0.96
RPF1-201ENST00000370654 ADGBQ8N7X0 1667 aa21.03■□□□□ 0.96
RPF1-201ENST00000370654 CAMSAP2Q08AD1 1489 aa21.02■□□□□ 0.96
RPF1-201ENST00000370654 NPATQ14207 1427 aa21.02■□□□□ 0.95
RPF1-201ENST00000370654 VPS8Q8N3P4 1428 aa21.02■□□□□ 0.95
RPF1-201ENST00000370654 RTEL1-TNFRSF6BF6WH68 1400 aa21.01■□□□□ 0.95
RPF1-201ENST00000370654 KANK4Q5T7N3 995 aaPredicted RBP21■□□□□ 0.95
RPF1-201ENST00000370654 PTPRKQ15262 1439 aa20.99■□□□□ 0.95
RPF1-201ENST00000370654 NCOA1Q15788 1441 aa20.99■□□□□ 0.95
RPF1-201ENST00000370654 DHX29Q7Z478 1369 aaKnown RBP20.99■□□□□ 0.95
RPF1-201ENST00000370654 LRRC9Q6ZRR7 1453 aa20.98■□□□□ 0.95
RPF1-201ENST00000370654 DMRT2Q9Y5R5 561 aa20.98■□□□□ 0.95
RPF1-201ENST00000370654 CCDC141Q6ZP82 1450 aa20.98■□□□□ 0.95
RPF1-201ENST00000370654 PTPRTO14522 1441 aa20.97■□□□□ 0.95
RPF1-201ENST00000370654 CAMSAP1Q5T5Y3 1602 aa20.97■□□□□ 0.95
RPF1-201ENST00000370654 NCKAP5LQ9HCH0 1330 aa20.94■□□□□ 0.94
RPF1-201ENST00000370654 MYO3AQ8NEV4 1616 aa20.94■□□□□ 0.94
RPF1-201ENST00000370654 KIF3BO15066 747 aa20.94■□□□□ 0.94
RPF1-201ENST00000370654 PPP6R1Q9UPN7 881 aa20.92■□□□□ 0.94
RPF1-201ENST00000370654 LTBP4Q8N2S1 1624 aa20.92■□□□□ 0.94
RPF1-201ENST00000370654 FBXO31Q5XUX0 539 aaPredicted RBP20.91■□□□□ 0.94
RPF1-201ENST00000370654 ARHGEF5Q12774 1597 aa20.91■□□□□ 0.94
RPF1-201ENST00000370654 CEP170BQ9Y4F5 1589 aaPredicted RBP20.9■□□□□ 0.94
RPF1-201ENST00000370654 ZNF142P52746 1687 aaPredicted RBP20.89■□□□□ 0.94
RPF1-201ENST00000370654 RSPH4AQ5TD94 716 aa20.89■□□□□ 0.93
RPF1-201ENST00000370654 MAP3K1Q13233 1512 aa20.87■□□□□ 0.93
RPF1-201ENST00000370654 TSPY4P0CV99 314 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms