RNA–Protein interactions for RNA: ENST00000370328.3

GABRE-201, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRE, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-201ENST00000370328 RRP7BPQ9NSQ0 103 aa11.74□□□□□ -0.53
GABRE-201ENST00000370328 LRRC9Q6ZRR7 1453 aa11.74□□□□□ -0.53
GABRE-201ENST00000370328 COL17A1Q9UMD9 1497 aaPredicted RBP11.74□□□□□ -0.53
GABRE-201ENST00000370328 SCAPERQ9BY12 1400 aa11.73□□□□□ -0.53
GABRE-201ENST00000370328 ARHGAP5Q13017 1502 aa11.73□□□□□ -0.53
GABRE-201ENST00000370328 MAPKBP1O60336 1514 aa11.73□□□□□ -0.53
GABRE-201ENST00000370328 FANCAO15360 1455 aa11.73□□□□□ -0.53
GABRE-201ENST00000370328 NCOA2Q15596 1464 aa11.73□□□□□ -0.53
GABRE-201ENST00000370328 TSPY4P0CV99 314 aa11.72□□□□□ -0.53
GABRE-201ENST00000370328 TSPY10P0CW01 314 aa11.72□□□□□ -0.53
GABRE-201ENST00000370328 PCGF6Q9BYE7 350 aa11.72□□□□□ -0.53
GABRE-201ENST00000370328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.531e-7■■■□□ 16
GABRE-201ENST00000370328 DIP2BQ9P265 1576 aa11.72□□□□□ -0.53
GABRE-201ENST00000370328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.71□□□□□ -0.541e-6■■■□□ 14.9
GABRE-201ENST00000370328 GGT6Q6P531 493 aa11.71□□□□□ -0.54
GABRE-201ENST00000370328 TTC37Q6PGP7 1564 aa11.69□□□□□ -0.54
GABRE-201ENST00000370328 TIAM1Q13009 1591 aa11.69□□□□□ -0.54
GABRE-201ENST00000370328 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
GABRE-201ENST00000370328 SENP3Q9H4L4 574 aaPredicted RBP11.69□□□□□ -0.54
GABRE-201ENST00000370328 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
GABRE-201ENST00000370328 AKNAQ7Z591 1439 aa11.68□□□□□ -0.54
GABRE-201ENST00000370328 ADGRL1O94910 1474 aa11.68□□□□□ -0.54
GABRE-201ENST00000370328 GPATCH8Q9UKJ3 1502 aaKnown RBP11.68□□□□□ -0.54
GABRE-201ENST00000370328 PLCH2O75038 1416 aa11.67□□□□□ -0.54
GABRE-201ENST00000370328 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
GABRE-201ENST00000370328 TRAPPC8Q9Y2L5 1435 aa11.66□□□□□ -0.54
GABRE-201ENST00000370328 KIF3BO15066 747 aa11.63□□□□□ -0.55
GABRE-201ENST00000370328 KIF13AQ9H1H9 1805 aa11.63□□□□□ -0.55
GABRE-201ENST00000370328 CEBPAP49715 358 aaPredicted RBP11.62□□□□□ -0.55
GABRE-201ENST00000370328 ESF1Q9H501 851 aaKnown RBP11.62□□□□□ -0.55
GABRE-201ENST00000370328 YEATS2Q9ULM3 1422 aa11.62□□□□□ -0.55
GABRE-201ENST00000370328 TEX14Q8IWB6 1497 aa11.62□□□□□ -0.55
GABRE-201ENST00000370328 MYOM3Q5VTT5 1437 aa11.62□□□□□ -0.55
GABRE-201ENST00000370328 DENND4BO75064 1496 aaPredicted RBP11.61□□□□□ -0.55
GABRE-201ENST00000370328 EHBP1L1Q8N3D4 1523 aa11.61□□□□□ -0.55
GABRE-201ENST00000370328 TRIM52Q96A61 297 aa11.6□□□□□ -0.55
GABRE-201ENST00000370328 ARHGEF12Q9NZN5 1544 aa11.6□□□□□ -0.55
GABRE-201ENST00000370328 KDM6BO15054 1643 aa11.6□□□□□ -0.55
GABRE-201ENST00000370328 FGD6Q6ZV73 1430 aa11.59□□□□□ -0.55
GABRE-201ENST00000370328 AEBP2Q6ZN18 517 aaPredicted RBP11.59□□□□□ -0.55
GABRE-201ENST00000370328 SYCP2Q9BX26 1530 aa11.59□□□□□ -0.55
GABRE-201ENST00000370328 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
GABRE-201ENST00000370328 CAMSAP2Q08AD1 1489 aa11.56□□□□□ -0.56
GABRE-201ENST00000370328 ABCA9Q8IUA7 1624 aa11.56□□□□□ -0.56
GABRE-201ENST00000370328 SUPT6HQ7KZ85 1726 aaKnown RBP11.55□□□□□ -0.56
GABRE-201ENST00000370328 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
GABRE-201ENST00000370328 FOXD1Q16676 465 aa11.53□□□□□ -0.56
GABRE-201ENST00000370328 MAP3K4Q9Y6R4 1608 aa11.53□□□□□ -0.56
GABRE-201ENST00000370328 GLI2P10070 1586 aa11.53□□□□□ -0.56
GABRE-201ENST00000370328 NEO1Q92859 1461 aa11.52□□□□□ -0.56
GABRE-201ENST00000370328 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.56
GABRE-201ENST00000370328 KDM4FA0A1W2PPD8 638 aa11.52□□□□□ -0.57
GABRE-201ENST00000370328 PTPRKQ15262 1439 aa11.52□□□□□ -0.57
GABRE-201ENST00000370328 WASHC2CQ9Y4E1 1318 aa11.52□□□□□ -0.57
GABRE-201ENST00000370328 CFAP43Q8NDM7 1665 aa11.51□□□□□ -0.57
GABRE-201ENST00000370328 SAMD9LQ8IVG5 1584 aa11.51□□□□□ -0.57
GABRE-201ENST00000370328 KIF15Q9NS87 1388 aa11.51□□□□□ -0.57
GABRE-201ENST00000370328 ABCC5O15440 1437 aa11.5□□□□□ -0.57
GABRE-201ENST00000370328 MYO5CQ9NQX4 1742 aa11.5□□□□□ -0.57
GABRE-201ENST00000370328 CDC42BPBQ9Y5S2 1711 aa11.5□□□□□ -0.57
GABRE-201ENST00000370328 ZNF518AQ6AHZ1 1483 aa11.5□□□□□ -0.57
GABRE-201ENST00000370328 C9orf84Q5VXU9 1444 aa11.5□□□□□ -0.57
GABRE-201ENST00000370328 PPRC1Q5VV67 1664 aaKnown RBP11.5□□□□□ -0.57
GABRE-201ENST00000370328 CDC42BPAQ5VT25 1732 aa11.5□□□□□ -0.57
GABRE-201ENST00000370328 MBD5Q9P267 1494 aa11.49□□□□□ -0.57
GABRE-201ENST00000370328 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
GABRE-201ENST00000370328 FBXO31Q5XUX0 539 aaPredicted RBP11.49□□□□□ -0.57
GABRE-201ENST00000370328 MAP3K1Q13233 1512 aa11.49□□□□□ -0.57
GABRE-201ENST00000370328 TRIM26Q12899 539 aaPredicted RBP11.49□□□□□ -0.57
GABRE-201ENST00000370328 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
GABRE-201ENST00000370328 MIA2Q96PC5 1412 aa11.48□□□□□ -0.57
GABRE-201ENST00000370328 CCDC141Q6ZP82 1450 aa11.48□□□□□ -0.57
GABRE-201ENST00000370328 HSPA2P54652 639 aa11.47□□□□□ -0.57
GABRE-201ENST00000370328 GTF3C3Q9Y5Q9 886 aa11.47□□□□□ -0.57
GABRE-201ENST00000370328 DAPK1P53355 1430 aa11.47□□□□□ -0.57
GABRE-201ENST00000370328 ANKRD30AQ9BXX3 1397 aa11.47□□□□□ -0.57
GABRE-201ENST00000370328 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
GABRE-201ENST00000370328 PREX2Q70Z35 1606 aa11.46□□□□□ -0.57
GABRE-201ENST00000370328 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.57
GABRE-201ENST00000370328 ABCC1P33527 1531 aa11.45□□□□□ -0.58
GABRE-201ENST00000370328 ARAP3Q8WWN8 1544 aa11.45□□□□□ -0.58
GABRE-201ENST00000370328 PLEKHH2Q8IVE3 1493 aa11.45□□□□□ -0.58
GABRE-201ENST00000370328 KIAA1107Q9UPP5 1409 aa11.45□□□□□ -0.58
GABRE-201ENST00000370328 NUTM2DQ5VT03 806 aaPredicted RBP11.44□□□□□ -0.58
GABRE-201ENST00000370328 SLC4A1APQ9BWU0 796 aaKnown RBP11.44□□□□□ -0.58
GABRE-201ENST00000370328 NUP155O75694 1391 aa11.43□□□□□ -0.58
GABRE-201ENST00000370328 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
GABRE-201ENST00000370328 ZFYVE16Q7Z3T8 1539 aa11.42□□□□□ -0.58
GABRE-201ENST00000370328 NCOA1Q15788 1441 aa11.42□□□□□ -0.58
GABRE-201ENST00000370328 ANKRD50Q9ULJ7 1429 aa11.41□□□□□ -0.58
GABRE-201ENST00000370328 ATP10AO60312 1499 aa11.41□□□□□ -0.58
GABRE-201ENST00000370328 A2MP01023 1474 aa11.41□□□□□ -0.58
GABRE-201ENST00000370328 DHX29Q7Z478 1369 aaKnown RBP11.4□□□□□ -0.58
GABRE-201ENST00000370328 NEUROD1Q13562 356 aa11.4□□□□□ -0.58
GABRE-201ENST00000370328 ATP7AQ04656 1500 aa11.4□□□□□ -0.58
GABRE-201ENST00000370328 RRBP1Q9P2E9 1410 aaKnown RBP11.39□□□□□ -0.59
GABRE-201ENST00000370328 RGL3Q3MIN7 710 aa11.39□□□□□ -0.59
GABRE-201ENST00000370328 BCANQ96GW7 911 aa11.39□□□□□ -0.59
GABRE-201ENST00000370328 ITSN2Q9NZM3 1697 aa11.39□□□□□ -0.59
GABRE-201ENST00000370328 FRMPD1Q5SYB0 1578 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms