RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
LRRC39-203ENST00000370138 POTEB3A0JP26 581 aa9.78□□□□□ -0.84
LRRC39-203ENST00000370138 PPP1R37O75864 691 aa9.78□□□□□ -0.84
LRRC39-203ENST00000370138 POTEBQ6S5H4 581 aa9.78□□□□□ -0.84
LRRC39-203ENST00000370138 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
LRRC39-203ENST00000370138 DOK7Q18PE1 504 aa9.76□□□□□ -0.85
LRRC39-203ENST00000370138 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
LRRC39-203ENST00000370138 ZNF710Q8N1W2 664 aa9.75□□□□□ -0.85
LRRC39-203ENST00000370138 HOXB1P14653 301 aaPredicted RBP9.74□□□□□ -0.85
LRRC39-203ENST00000370138 HS3ST6Q96QI5 342 aa9.73□□□□□ -0.85
LRRC39-203ENST00000370138 KIF3CO14782 793 aa9.72□□□□□ -0.85
LRRC39-203ENST00000370138 C2orf72A6NCS6 295 aa9.71□□□□□ -0.86
LRRC39-203ENST00000370138 NKX1-1Q15270 411 aaPredicted RBP9.71□□□□□ -0.86
LRRC39-203ENST00000370138 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
LRRC39-203ENST00000370138 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
LRRC39-203ENST00000370138 ZSWIM6Q9HCJ5 1215 aa9.66□□□□□ -0.86
LRRC39-203ENST00000370138 DNAJC5Q9H3Z4 198 aa9.66□□□□□ -0.86
LRRC39-203ENST00000370138 ERBB3P21860 1342 aa9.65□□□□□ -0.86
LRRC39-203ENST00000370138 ARSIQ5FYB1 569 aa9.65□□□□□ -0.87
LRRC39-203ENST00000370138 KHSRPQ92945 711 aaKnown RBP eCLIP9.65□□□□□ -0.87
LRRC39-203ENST00000370138 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
LRRC39-203ENST00000370138 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
LRRC39-203ENST00000370138 RNF166Q96A37 237 aaPredicted RBP9.61□□□□□ -0.87
LRRC39-203ENST00000370138 DCAF8L2P0C7V8 631 aa9.59□□□□□ -0.87
LRRC39-203ENST00000370138 GTPBP6O43824 516 aaPredicted RBP9.55□□□□□ -0.88
LRRC39-203ENST00000370138 SLC34A2O95436 690 aa9.55□□□□□ -0.88
LRRC39-203ENST00000370138 NUDT7P0C024 238 aa9.55□□□□□ -0.88
LRRC39-203ENST00000370138 PCDHGA4Q9Y5G9 962 aa9.55□□□□□ -0.88
LRRC39-203ENST00000370138 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
LRRC39-203ENST00000370138 ZNF316A6NFI3 1004 aaPredicted RBP9.53□□□□□ -0.88
LRRC39-203ENST00000370138 FOXK1P85037 733 aa9.53□□□□□ -0.88
LRRC39-203ENST00000370138 DSG2Q14126 1118 aa9.53□□□□□ -0.88
LRRC39-203ENST00000370138 PLPP6Q8IY26 295 aa9.53□□□□□ -0.88
LRRC39-203ENST00000370138 ZNF687Q8N1G0 1237 aa9.53□□□□□ -0.88
LRRC39-203ENST00000370138 RYDENQ9NUL5 291 aaKnown RBP9.53□□□□□ -0.88
LRRC39-203ENST00000370138 LHX6Q9UPM6 363 aa9.49□□□□□ -0.89
LRRC39-203ENST00000370138 CRISPLD2Q9H0B8 497 aa9.48□□□□□ -0.89
LRRC39-203ENST00000370138 NCKAP5LQ9HCH0 1330 aa9.47□□□□□ -0.89
LRRC39-203ENST00000370138 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
LRRC39-203ENST00000370138 KDM4FA0A1W2PPD8 638 aa9.47□□□□□ -0.89
LRRC39-203ENST00000370138 POTEEQ6S8J3 1075 aa9.44□□□□□ -0.9
LRRC39-203ENST00000370138 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
LRRC39-203ENST00000370138 PPP1R15BQ5SWA1 713 aa9.42□□□□□ -0.9
LRRC39-203ENST00000370138 RTN4Q9NQC3 1192 aaKnown RBP9.41□□□□□ -0.9
LRRC39-203ENST00000370138 CADPS2Q86UW7 1296 aa9.4□□□□□ -0.9
LRRC39-203ENST00000370138 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
LRRC39-203ENST00000370138 UPF1Q92900 1129 aaKnown RBP eCLIP9.4□□□□□ -0.9
LRRC39-203ENST00000370138 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.9
LRRC39-203ENST00000370138 PDE4AP27815 886 aa9.4□□□□□ -0.91
LRRC39-203ENST00000370138 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.91
LRRC39-203ENST00000370138 LSM11P83369 360 aaKnown RBP eCLIP9.38□□□□□ -0.91
LRRC39-203ENST00000370138 AMER1Q5JTC6 1135 aaPredicted RBP9.38□□□□□ -0.91
LRRC39-203ENST00000370138 LARP6Q9BRS8 491 aaKnown RBP9.38□□□□□ -0.91
LRRC39-203ENST00000370138 TBC1D12O60347 775 aa9.37□□□□□ -0.91
LRRC39-203ENST00000370138 PBX2P40425 430 aa9.35□□□□□ -0.91
LRRC39-203ENST00000370138 DDX27Q96GQ7 796 aaKnown RBP9.35□□□□□ -0.91
LRRC39-203ENST00000370138 MFSD10Q14728 455 aa9.34□□□□□ -0.91
LRRC39-203ENST00000370138 BBXQ8WY36 941 aaPredicted RBP9.34□□□□□ -0.91
LRRC39-203ENST00000370138 PSDA5PKW4 1024 aaPredicted RBP9.34□□□□□ -0.91
LRRC39-203ENST00000370138 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
LRRC39-203ENST00000370138 PSEN2P49810 448 aa9.31□□□□□ -0.92
LRRC39-203ENST00000370138 PPP4R3BQ5MIZ7 849 aa9.3□□□□□ -0.92
LRRC39-203ENST00000370138 EMILIN3Q9NT22 766 aa9.3□□□□□ -0.92
LRRC39-203ENST00000370138 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
LRRC39-203ENST00000370138 PTGER2P43116 358 aa9.28□□□□□ -0.92
LRRC39-203ENST00000370138 EVI5O60447 810 aa9.27□□□□□ -0.93
LRRC39-203ENST00000370138 ADGRD1Q6QNK2 874 aa9.27□□□□□ -0.93
LRRC39-203ENST00000370138 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
LRRC39-203ENST00000370138 ANO8Q9HCE9 1232 aaPredicted RBP9.26□□□□□ -0.93
LRRC39-203ENST00000370138 KCNK17Q96T54 332 aa9.25□□□□□ -0.93
LRRC39-203ENST00000370138 FOSBP53539 338 aa9.24□□□□□ -0.93
LRRC39-203ENST00000370138 MAP3K9P80192 1104 aa9.24□□□□□ -0.93
LRRC39-203ENST00000370138 SPRYD3Q8NCJ5 442 aa9.24□□□□□ -0.93
LRRC39-203ENST00000370138 PLA2G2EQ9NZK7 142 aa9.22□□□□□ -0.93
LRRC39-203ENST00000370138 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.93
LRRC39-203ENST00000370138 TK2O00142 265 aa9.21□□□□□ -0.94
LRRC39-203ENST00000370138 HRO43593 1189 aa9.21□□□□□ -0.94
LRRC39-203ENST00000370138 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
LRRC39-203ENST00000370138 JPH4Q96JJ6 628 aa9.21□□□□□ -0.94
LRRC39-203ENST00000370138 BCL2L12Q9HB09 334 aa9.21□□□□□ -0.94
LRRC39-203ENST00000370138 PAXIP1Q6ZW49 1069 aaPredicted RBP9.2□□□□□ -0.94
LRRC39-203ENST00000370138 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
LRRC39-203ENST00000370138 ADAM33Q9BZ11 813 aa9.19□□□□□ -0.94
LRRC39-203ENST00000370138 DPYSL4O14531 572 aa9.17□□□□□ -0.94
LRRC39-203ENST00000370138 ZDHHC16Q969W1 377 aa9.17□□□□□ -0.94
LRRC39-203ENST00000370138 KCNH8Q96L42 1107 aa9.16□□□□□ -0.94
LRRC39-203ENST00000370138 VPS9D1Q9Y2B5 631 aa9.16□□□□□ -0.94
LRRC39-203ENST00000370138 PCDHGA10Q9Y5H3 936 aa9.16□□□□□ -0.94
LRRC39-203ENST00000370138 PTPREP23469 700 aa9.15□□□□□ -0.94
LRRC39-203ENST00000370138 ZBED2Q9BTP6 218 aa9.12□□□□□ -0.95
LRRC39-203ENST00000370138 SLC4A5Q9BY07 1137 aa9.11□□□□□ -0.95
LRRC39-203ENST00000370138 PHF14O94880 888 aa9.1□□□□□ -0.95
LRRC39-203ENST00000370138 COL9A1P20849 921 aa9.09□□□□□ -0.95
LRRC39-203ENST00000370138 TYW1BQ6NUM6 668 aa9.09□□□□□ -0.95
LRRC39-203ENST00000370138 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
LRRC39-203ENST00000370138 BHMG1C9JSJ3 638 aaPredicted RBP9.08□□□□□ -0.96
LRRC39-203ENST00000370138 STAC3Q96MF2 364 aa9.08□□□□□ -0.96
LRRC39-203ENST00000370138 DDX12PQ92771 950 aa9.08□□□□□ -0.96
LRRC39-203ENST00000370138 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
LRRC39-203ENST00000370138 FBXW7Q969H0 707 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms