RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
SFR1-202ENST00000369729 KIF14Q15058 1648 aa13.47□□□□□ -0.25
SFR1-202ENST00000369729 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
SFR1-202ENST00000369729 CCNB3Q8WWL7 1395 aa13.47□□□□□ -0.25
SFR1-202ENST00000369729 WDR7Q9Y4E6 1490 aa13.46□□□□□ -0.25
SFR1-202ENST00000369729 ASXL2Q76L83 1435 aa13.46□□□□□ -0.26
SFR1-202ENST00000369729 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.26
SFR1-202ENST00000369729 KCNA4P22459 653 aa13.45□□□□□ -0.26
SFR1-202ENST00000369729 KCNH8Q96L42 1107 aa13.45□□□□□ -0.26
SFR1-202ENST00000369729 MAPKBP1O60336 1514 aa13.43□□□□□ -0.26
SFR1-202ENST00000369729 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
SFR1-202ENST00000369729 MIA2Q96PC5 1412 aa13.41□□□□□ -0.26
SFR1-202ENST00000369729 PHLDB1Q86UU1 1377 aa13.41□□□□□ -0.26
SFR1-202ENST00000369729 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
SFR1-202ENST00000369729 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
SFR1-202ENST00000369729 ITSN2Q9NZM3 1697 aa13.39□□□□□ -0.27
SFR1-202ENST00000369729 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
SFR1-202ENST00000369729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.38□□□□□ -0.27
SFR1-202ENST00000369729 ABCC10Q5T3U5 1492 aa13.38□□□□□ -0.27
SFR1-202ENST00000369729 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
SFR1-202ENST00000369729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.36□□□□□ -0.27
SFR1-202ENST00000369729 GPATCH8Q9UKJ3 1502 aaKnown RBP13.36□□□□□ -0.27
SFR1-202ENST00000369729 EFCAB2Q5VUJ9 269 aa13.35□□□□□ -0.27
SFR1-202ENST00000369729 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
SFR1-202ENST00000369729 PLCH2O75038 1416 aa13.34□□□□□ -0.27
SFR1-202ENST00000369729 ARAP3Q8WWN8 1544 aa13.33□□□□□ -0.28
SFR1-202ENST00000369729 ABCA9Q8IUA7 1624 aa13.33□□□□□ -0.28
SFR1-202ENST00000369729 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
SFR1-202ENST00000369729 ZNF777Q9ULD5 760 aaPredicted RBP13.33□□□□□ -0.28
SFR1-202ENST00000369729 MYO5CQ9NQX4 1742 aa13.32□□□□□ -0.28
SFR1-202ENST00000369729 ARHGAP5Q13017 1502 aa13.32□□□□□ -0.28
SFR1-202ENST00000369729 CD109Q6YHK3 1445 aa13.32□□□□□ -0.28
SFR1-202ENST00000369729 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
SFR1-202ENST00000369729 PLEKHH2Q8IVE3 1493 aa13.32□□□□□ -0.28
SFR1-202ENST00000369729 FAM69CQ0P6D2 419 aa13.32□□□□□ -0.28
SFR1-202ENST00000369729 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
SFR1-202ENST00000369729 PTPN23Q9H3S7 1636 aa13.32□□□□□ -0.28
SFR1-202ENST00000369729 GLI2P10070 1586 aa13.31□□□□□ -0.28
SFR1-202ENST00000369729 TCOF1Q13428 1488 aaKnown RBP13.31□□□□□ -0.28
SFR1-202ENST00000369729 ABCB7O75027 752 aa13.31□□□□□ -0.28
SFR1-202ENST00000369729 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
SFR1-202ENST00000369729 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
SFR1-202ENST00000369729 CAMSAP2Q08AD1 1489 aa13.28□□□□□ -0.28
SFR1-202ENST00000369729 CFAP74Q9C0B2 1584 aa13.27□□□□□ -0.28
SFR1-202ENST00000369729 FANCAO15360 1455 aa13.27□□□□□ -0.29
SFR1-202ENST00000369729 ITGAEP38570 1179 aa13.27□□□□□ -0.29
SFR1-202ENST00000369729 DIP2BQ9P265 1576 aa13.27□□□□□ -0.29
SFR1-202ENST00000369729 KIAA1107Q9UPP5 1409 aa13.26□□□□□ -0.29
SFR1-202ENST00000369729 TSPY4P0CV99 314 aa13.26□□□□□ -0.29
SFR1-202ENST00000369729 TSPY10P0CW01 314 aa13.26□□□□□ -0.29
SFR1-202ENST00000369729 TEX14Q8IWB6 1497 aa13.25□□□□□ -0.29
SFR1-202ENST00000369729 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
SFR1-202ENST00000369729 ZNF644Q9H582 1327 aaPredicted RBP13.24□□□□□ -0.29
SFR1-202ENST00000369729 NEO1Q92859 1461 aa13.24□□□□□ -0.29
SFR1-202ENST00000369729 MAP3K4Q9Y6R4 1608 aa13.23□□□□□ -0.29
SFR1-202ENST00000369729 HNRNPMP52272 730 aaKnown RBP eCLIP13.22□□□□□ -0.29
SFR1-202ENST00000369729 AKNAQ7Z591 1439 aa13.22□□□□□ -0.29
SFR1-202ENST00000369729 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.29
SFR1-202ENST00000369729 CCDC141Q6ZP82 1450 aa13.21□□□□□ -0.29
SFR1-202ENST00000369729 DAPK1P53355 1430 aa13.21□□□□□ -0.29
SFR1-202ENST00000369729 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
SFR1-202ENST00000369729 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
SFR1-202ENST00000369729 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
SFR1-202ENST00000369729 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
SFR1-202ENST00000369729 DNMT1P26358 1616 aaKnown RBP13.2□□□□□ -0.3
SFR1-202ENST00000369729 ABCC1P33527 1531 aa13.19□□□□□ -0.3
SFR1-202ENST00000369729 ABCC5O15440 1437 aa13.19□□□□□ -0.3
SFR1-202ENST00000369729 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
SFR1-202ENST00000369729 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
SFR1-202ENST00000369729 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
SFR1-202ENST00000369729 ROCK1Q13464 1354 aa13.18□□□□□ -0.3
SFR1-202ENST00000369729 ANKRD30AQ9BXX3 1397 aa13.18□□□□□ -0.3
SFR1-202ENST00000369729 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
SFR1-202ENST00000369729 CHIC2Q9UKJ5 165 aa13.17□□□□□ -0.3
SFR1-202ENST00000369729 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
SFR1-202ENST00000369729 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
SFR1-202ENST00000369729 KIF13AQ9H1H9 1805 aa13.15□□□□□ -0.3
SFR1-202ENST00000369729 SPAG9O60271 1321 aaKnown RBP13.15□□□□□ -0.3
SFR1-202ENST00000369729 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
SFR1-202ENST00000369729 C9orf84Q5VXU9 1444 aa13.15□□□□□ -0.3
SFR1-202ENST00000369729 RTEL1-TNFRSF6BF6WH68 1400 aa13.14□□□□□ -0.31
SFR1-202ENST00000369729 SETD5Q9C0A6 1442 aa13.14□□□□□ -0.31
SFR1-202ENST00000369729 HRCP23327 699 aa13.13□□□□□ -0.31
SFR1-202ENST00000369729 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
SFR1-202ENST00000369729 ADGRL2O95490 1459 aa13.12□□□□□ -0.31
SFR1-202ENST00000369729 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
SFR1-202ENST00000369729 TSPOAP1O95153 1857 aa13.12□□□□□ -0.31
SFR1-202ENST00000369729 PTPRKQ15262 1439 aa13.12□□□□□ -0.31
SFR1-202ENST00000369729 POGZQ7Z3K3 1410 aa13.12□□□□□ -0.31
SFR1-202ENST00000369729 TRAPPC8Q9Y2L5 1435 aa13.12□□□□□ -0.31
SFR1-202ENST00000369729 ARHGEF12Q9NZN5 1544 aa13.12□□□□□ -0.31
SFR1-202ENST00000369729 AFAP1Q8N556 730 aa13.12□□□□□ -0.31
SFR1-202ENST00000369729 MAST1Q9Y2H9 1570 aa13.12□□□□□ -0.31
SFR1-202ENST00000369729 NCOA1Q15788 1441 aa13.11□□□□□ -0.31
SFR1-202ENST00000369729 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
SFR1-202ENST00000369729 RRP7BPQ9NSQ0 103 aa13.11□□□□□ -0.31
SFR1-202ENST00000369729 KIF15Q9NS87 1388 aa13.09□□□□□ -0.31
SFR1-202ENST00000369729 NAIPQ13075 1403 aa13.08□□□□□ -0.31
SFR1-202ENST00000369729 PPRC1Q5VV67 1664 aaKnown RBP13.08□□□□□ -0.32
SFR1-202ENST00000369729 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms