RNA–Protein interactions for RNA: ENST00000369214.2

PRDM13-201, Transcript of PR/SET domain 13, humanhuman

TSL 5

Gene PRDM13, Length 3,232 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-201ENST00000369214 FOXD1Q16676 465 aa25.67■■□□□ 1.7
PRDM13-201ENST00000369214 ERICH6BQ5W0A0 696 aa25.67■■□□□ 1.7
PRDM13-201ENST00000369214 ANKRD30BQ9BXX2 1392 aa25.66■■□□□ 1.7
PRDM13-201ENST00000369214 CCDC184Q52MB2 194 aa25.66■■□□□ 1.7
PRDM13-201ENST00000369214 DAPK1P53355 1430 aa25.65■■□□□ 1.7
PRDM13-201ENST00000369214 PRKRIP1Q9H875 184 aaPredicted RBP25.65■■□□□ 1.7
PRDM13-201ENST00000369214 DNMT1P26358 1616 aaKnown RBP25.63■■□□□ 1.69
PRDM13-201ENST00000369214 TEX14Q8IWB6 1497 aa25.63■■□□□ 1.69
PRDM13-201ENST00000369214 CDK11AQ9UQ88 783 aaPredicted RBP25.63■■□□□ 1.69
PRDM13-201ENST00000369214 ARID3CA6NKF2 412 aa25.61■■□□□ 1.69
PRDM13-201ENST00000369214 POLR1AO95602 1720 aaPredicted RBP25.61■■□□□ 1.69
PRDM13-201ENST00000369214 NBPF8Q3BBV2 869 aa25.61■■□□□ 1.69
PRDM13-201ENST00000369214 ABCC5O15440 1437 aa25.6■■□□□ 1.69
PRDM13-201ENST00000369214 SPATA31E1Q6ZUB1 1445 aa25.57■■□□□ 1.68
PRDM13-201ENST00000369214 MRS2Q9HD23 443 aa25.56■■□□□ 1.68
PRDM13-201ENST00000369214 PPP4R2Q9NY27 417 aa25.56■■□□□ 1.68
PRDM13-201ENST00000369214 FANCIQ9NVI1 1328 aa25.56■■□□□ 1.68
PRDM13-201ENST00000369214 MSH5O43196 834 aa25.55■■□□□ 1.68
PRDM13-201ENST00000369214 FAM9BQ8IZU0 186 aa25.55■■□□□ 1.68
PRDM13-201ENST00000369214 ZBED9Q6R2W3 1325 aa25.55■■□□□ 1.68
PRDM13-201ENST00000369214 KIF7Q2M1P5 1343 aa25.53■■□□□ 1.68
PRDM13-201ENST00000369214 SLC4A1APQ9BWU0 796 aaKnown RBP25.52■■□□□ 1.68
PRDM13-201ENST00000369214 KIAA0556O60303 1618 aa25.52■■□□□ 1.68
PRDM13-201ENST00000369214 ZNF644Q9H582 1327 aaPredicted RBP25.5■■□□□ 1.67
PRDM13-201ENST00000369214 NUP153P49790 1475 aaKnown RBP25.49■■□□□ 1.67
PRDM13-201ENST00000369214 DISP1Q96F81 1524 aa25.49■■□□□ 1.67
PRDM13-201ENST00000369214 RAPGEF6Q8TEU7 1601 aa25.48■■□□□ 1.67
PRDM13-201ENST00000369214 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
PRDM13-201ENST00000369214 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
PRDM13-201ENST00000369214 PZPP20742 1482 aa25.45■■□□□ 1.67
PRDM13-201ENST00000369214 ADGBQ8N7X0 1667 aa25.41■■□□□ 1.66
PRDM13-201ENST00000369214 MBD5Q9P267 1494 aa25.4■■□□□ 1.66
PRDM13-201ENST00000369214 CAMSAP2Q08AD1 1489 aa25.39■■□□□ 1.66
PRDM13-201ENST00000369214 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
PRDM13-201ENST00000369214 ITSN2Q9NZM3 1697 aa25.38■■□□□ 1.65
PRDM13-201ENST00000369214 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
PRDM13-201ENST00000369214 TROQ12816 1431 aaPredicted RBP25.37■■□□□ 1.65
PRDM13-201ENST00000369214 DHX29Q7Z478 1369 aaKnown RBP25.36■■□□□ 1.65
PRDM13-201ENST00000369214 B4GALNT3Q6L9W6 998 aa25.36■■□□□ 1.65
PRDM13-201ENST00000369214 KIAA1107Q9UPP5 1409 aa25.36■■□□□ 1.65
PRDM13-201ENST00000369214 BCORL1Q5H9F3 1711 aa25.34■■□□□ 1.65
PRDM13-201ENST00000369214 PRG4Q92954 1404 aaPredicted RBP25.34■■□□□ 1.65
PRDM13-201ENST00000369214 ADGRL2O95490 1459 aa25.34■■□□□ 1.65
PRDM13-201ENST00000369214 CFDP1Q9UEE9 299 aaPredicted RBP25.33■■□□□ 1.65
PRDM13-201ENST00000369214 KIF14Q15058 1648 aa25.33■■□□□ 1.65
PRDM13-201ENST00000369214 USP47Q96K76 1375 aa25.32■■□□□ 1.64
PRDM13-201ENST00000369214 CROCC2H7BZ55 1655 aa25.32■■□□□ 1.64
PRDM13-201ENST00000369214 SMG6Q86US8 1419 aaKnown RBP25.32■■□□□ 1.64
PRDM13-201ENST00000369214 ERICH6Q7L0X2 663 aa25.32■■□□□ 1.64
PRDM13-201ENST00000369214 GRIN2AQ12879 1464 aa25.32■■□□□ 1.64
PRDM13-201ENST00000369214 GPATCH8Q9UKJ3 1502 aaKnown RBP25.31■■□□□ 1.64
PRDM13-201ENST00000369214 ADCY10Q96PN6 1610 aa25.3■■□□□ 1.64
PRDM13-201ENST00000369214 BCL11AQ9H165 835 aa25.3■■□□□ 1.64
PRDM13-201ENST00000369214 KDM5CP41229 1560 aa25.29■■□□□ 1.64
PRDM13-201ENST00000369214 ARID4BQ4LE39 1312 aaPredicted RBP25.29■■□□□ 1.64
PRDM13-201ENST00000369214 PKD2Q13563 968 aa25.26■■□□□ 1.63
PRDM13-201ENST00000369214 ANKRD30AQ9BXX3 1397 aa25.25■■□□□ 1.63
PRDM13-201ENST00000369214 ZNF326Q5BKZ1 582 aaKnown RBP25.24■■□□□ 1.63
PRDM13-201ENST00000369214 NUDCQ9Y266 331 aa25.24■■□□□ 1.63
PRDM13-201ENST00000369214 ZNF777Q9ULD5 760 aaPredicted RBP25.23■■□□□ 1.63
PRDM13-201ENST00000369214 POLR3GLQ9BT43 218 aa25.22■■□□□ 1.63
PRDM13-201ENST00000369214 PLB1Q6P1J6 1458 aa25.22■■□□□ 1.63
PRDM13-201ENST00000369214 UHRF1BP1Q6BDS2 1440 aa25.22■■□□□ 1.63
PRDM13-201ENST00000369214 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
PRDM13-201ENST00000369214 RNF123Q5XPI4 1314 aa25.21■■□□□ 1.63
PRDM13-201ENST00000369214 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
PRDM13-201ENST00000369214 RALGAPBQ86X10 1494 aa25.2■■□□□ 1.62
PRDM13-201ENST00000369214 ROCK2O75116 1388 aaKnown RBP25.2■■□□□ 1.62
PRDM13-201ENST00000369214 CNGB1Q14028 1251 aaPredicted RBP25.18■■□□□ 1.62
PRDM13-201ENST00000369214 ARHGEF12Q9NZN5 1544 aa25.15■■□□□ 1.62
PRDM13-201ENST00000369214 PNISRQ8TF01 805 aaKnown RBP25.15■■□□□ 1.62
PRDM13-201ENST00000369214 CEP170Q5SW79 1584 aa25.15■■□□□ 1.62
PRDM13-201ENST00000369214 CDC42BPAQ5VT25 1732 aa25.13■■□□□ 1.61
PRDM13-201ENST00000369214 SHANK2Q9UPX8 1470 aa25.12■■□□□ 1.61
PRDM13-201ENST00000369214 MAGI1Q96QZ7 1491 aaPredicted RBP25.12■■□□□ 1.61
PRDM13-201ENST00000369214 NUP155O75694 1391 aa25.11■■□□□ 1.61
PRDM13-201ENST00000369214 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
PRDM13-201ENST00000369214 CARD11Q9BXL7 1154 aa25.11■■□□□ 1.61
PRDM13-201ENST00000369214 KDM5DQ9BY66 1539 aa25.1■■□□□ 1.61
PRDM13-201ENST00000369214 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
PRDM13-201ENST00000369214 CARMIL2Q6F5E8 1435 aa25.09■■□□□ 1.61
PRDM13-201ENST00000369214 C9orf84Q5VXU9 1444 aa25.09■■□□□ 1.61
PRDM13-201ENST00000369214 CCDC136Q96JN2 1154 aa25.08■■□□□ 1.61
PRDM13-201ENST00000369214 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
PRDM13-201ENST00000369214 SYNJ2O15056 1496 aa25.07■■□□□ 1.6
PRDM13-201ENST00000369214 ABCC10Q5T3U5 1492 aa25.06■■□□□ 1.6
PRDM13-201ENST00000369214 MYT1LQ9UL68 1186 aa25.06■■□□□ 1.6
PRDM13-201ENST00000369214 LRPPRCP42704 1394 aaKnown RBP25.05■■□□□ 1.6
PRDM13-201ENST00000369214 KTN1Q86UP2 1357 aaKnown RBP25.05■■□□□ 1.6
PRDM13-201ENST00000369214 PLEKHD1A6NEE1 506 aa25.04■■□□□ 1.6
PRDM13-201ENST00000369214 BRD4O60885 1362 aaPredicted RBP25.03■■□□□ 1.6
PRDM13-201ENST00000369214 E9PCH4 1651 aa25.03■■□□□ 1.6
PRDM13-201ENST00000369214 ST20-MTHFSA0A0A6YYL1 179 aa25.03■■□□□ 1.6
PRDM13-201ENST00000369214 MYBBP1AQ9BQG0 1328 aaKnown RBP25.02■■□□□ 1.6
PRDM13-201ENST00000369214 JPH4Q96JJ6 628 aa25.01■■□□□ 1.59
PRDM13-201ENST00000369214 NOP58Q9Y2X3 529 aaKnown RBP25.01■■□□□ 1.59
PRDM13-201ENST00000369214 PTPRGP23470 1445 aa25.01■■□□□ 1.59
PRDM13-201ENST00000369214 ABCA8O94911 1581 aa25.01■■□□□ 1.59
PRDM13-201ENST00000369214 RALBP1Q15311 655 aa25.01■■□□□ 1.59
PRDM13-201ENST00000369214 KDM2AQ9Y2K7 1162 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms