RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 CSPP1Q1MSJ5 1256 aa12.78□□□□□ -0.36
SIM1-202ENST00000369208 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.36
SIM1-202ENST00000369208 RGL3Q3MIN7 710 aa12.76□□□□□ -0.37
SIM1-202ENST00000369208 TSPYL1Q9H0U9 437 aa12.76□□□□□ -0.37
SIM1-202ENST00000369208 OS9Q13438 667 aaPredicted RBP12.75□□□□□ -0.37
SIM1-202ENST00000369208 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
SIM1-202ENST00000369208 CARMIL2Q6F5E8 1435 aa12.75□□□□□ -0.37
SIM1-202ENST00000369208 GBP4Q96PP9 640 aa12.74□□□□□ -0.37
SIM1-202ENST00000369208 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
SIM1-202ENST00000369208 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
SIM1-202ENST00000369208 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
SIM1-202ENST00000369208 TCERG1O14776 1098 aaKnown RBP12.73□□□□□ -0.37
SIM1-202ENST00000369208 CFAP44Q96MT7 982 aa12.73□□□□□ -0.37
SIM1-202ENST00000369208 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
SIM1-202ENST00000369208 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
SIM1-202ENST00000369208 FGD1P98174 961 aa12.72□□□□□ -0.37
SIM1-202ENST00000369208 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
SIM1-202ENST00000369208 TEX35Q5T0J7 233 aa12.71□□□□□ -0.37
SIM1-202ENST00000369208 CCER2I3L3R5 266 aa12.7□□□□□ -0.38
SIM1-202ENST00000369208 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
SIM1-202ENST00000369208 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
SIM1-202ENST00000369208 PDIA4P13667 645 aaKnown RBP12.69□□□□□ -0.38
SIM1-202ENST00000369208 GPS2Q13227 327 aa12.69□□□□□ -0.38
SIM1-202ENST00000369208 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
SIM1-202ENST00000369208 CWC15Q9P013 229 aaKnown RBP12.69□□□□□ -0.38
SIM1-202ENST00000369208 PDS5BQ9NTI5 1447 aa12.69□□□□□ -0.38
SIM1-202ENST00000369208 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
SIM1-202ENST00000369208 EIF4G1Q04637 1599 aaKnown RBP12.68□□□□□ -0.38
SIM1-202ENST00000369208 MLECQ14165 292 aa12.68□□□□□ -0.38
SIM1-202ENST00000369208 KCNJ4P48050 445 aa12.67□□□□□ -0.38
SIM1-202ENST00000369208 BAZ1AQ9NRL2 1556 aaPredicted RBP12.67□□□□□ -0.38
SIM1-202ENST00000369208 RTF1Q92541 710 aaKnown RBP12.67□□□□□ -0.38
SIM1-202ENST00000369208 EID1Q9Y6B2 187 aa12.66□□□□□ -0.38
SIM1-202ENST00000369208 DDX11L8A8MPP1 907 aa12.66□□□□□ -0.38
SIM1-202ENST00000369208 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
SIM1-202ENST00000369208 TMF1P82094 1093 aa12.65□□□□□ -0.38
SIM1-202ENST00000369208 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
SIM1-202ENST00000369208 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.39
SIM1-202ENST00000369208 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
SIM1-202ENST00000369208 HDAC5Q9UQL6 1122 aa12.64□□□□□ -0.39
SIM1-202ENST00000369208 PHF14O94880 888 aa12.63□□□□□ -0.39
SIM1-202ENST00000369208 SKOR2Q2VWA4 1001 aaPredicted RBP12.63□□□□□ -0.39
SIM1-202ENST00000369208 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
SIM1-202ENST00000369208 CLSTN1O94985 981 aa12.62□□□□□ -0.39
SIM1-202ENST00000369208 MCCP23508 829 aa12.62□□□□□ -0.39
SIM1-202ENST00000369208 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
SIM1-202ENST00000369208 ISY1Q9ULR0 285 aaKnown RBP12.61□□□□□ -0.39
SIM1-202ENST00000369208 AEBP2Q6ZN18 517 aaPredicted RBP12.61□□□□□ -0.39
SIM1-202ENST00000369208 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
SIM1-202ENST00000369208 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
SIM1-202ENST00000369208 HSP90B1P14625 803 aaKnown RBP12.6□□□□□ -0.39
SIM1-202ENST00000369208 GOLGA6L4A6NEF3 574 aa12.6□□□□□ -0.39
SIM1-202ENST00000369208 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
SIM1-202ENST00000369208 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
SIM1-202ENST00000369208 G3V3G9 751 aa12.59□□□□□ -0.39
SIM1-202ENST00000369208 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
SIM1-202ENST00000369208 EIF3AQ14152 1382 aaKnown RBP12.58□□□□□ -0.4
SIM1-202ENST00000369208 SMARCA2P51531 1590 aa12.58□□□□□ -0.4
SIM1-202ENST00000369208 EFCAB2Q5VUJ9 269 aa12.57□□□□□ -0.4
SIM1-202ENST00000369208 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
SIM1-202ENST00000369208 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
SIM1-202ENST00000369208 DCAF8L1A6NGE4 600 aa12.56□□□□□ -0.4
SIM1-202ENST00000369208 PDCL3Q9H2J4 239 aa12.56□□□□□ -0.4
SIM1-202ENST00000369208 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
SIM1-202ENST00000369208 GGT6Q6P531 493 aa12.55□□□□□ -0.4
SIM1-202ENST00000369208 ZMYND15Q9H091 742 aa12.55□□□□□ -0.4
SIM1-202ENST00000369208 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
SIM1-202ENST00000369208 GNL2Q13823 731 aaKnown RBP12.54□□□□□ -0.4
SIM1-202ENST00000369208 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
SIM1-202ENST00000369208 SPAG9O60271 1321 aaKnown RBP12.54□□□□□ -0.4
SIM1-202ENST00000369208 HMGN5P82970 282 aaKnown RBP12.54□□□□□ -0.4
SIM1-202ENST00000369208 USP8P40818 1118 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 FAM13BQ9NYF5 915 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
SIM1-202ENST00000369208 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
SIM1-202ENST00000369208 CARMIL1Q5VZK9 1371 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 CCDC34Q96HJ3 373 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 CUX2O14529 1486 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.4
SIM1-202ENST00000369208 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
SIM1-202ENST00000369208 RSPH4AQ5TD94 716 aa12.51□□□□□ -0.41
SIM1-202ENST00000369208 DRC7Q8IY82 874 aa12.51□□□□□ -0.41
SIM1-202ENST00000369208 GPATCH3Q96I76 525 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 B4GALNT3Q6L9W6 998 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 KIAA1211Q6ZU35 1233 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 TNIKQ9UKE5 1360 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 STK11IPQ8N1F8 1099 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 DIAPH3Q9NSV4 1193 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 DCAF11Q8TEB1 546 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 SOX12O15370 315 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 NEFHP12036 1026 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 DEF6Q9H4E7 631 aa12.49□□□□□ -0.41
SIM1-202ENST00000369208 IRX3P78415 501 aaPredicted RBP12.49□□□□□ -0.41
SIM1-202ENST00000369208 FRAT1Q92837 279 aaPredicted RBP12.49□□□□□ -0.41
SIM1-202ENST00000369208 RDXP35241 583 aaKnown RBP12.49□□□□□ -0.41
SIM1-202ENST00000369208 TERF2IPQ9NYB0 399 aa12.48□□□□□ -0.41
SIM1-202ENST00000369208 ARHGAP35Q9NRY4 1499 aa12.48□□□□□ -0.41
SIM1-202ENST00000369208 SSR1P43307 286 aaKnown RBP12.48□□□□□ -0.41
SIM1-202ENST00000369208 GORABQ5T7V8 394 aa12.47□□□□□ -0.41
SIM1-202ENST00000369208 FMN1Q68DA7 1419 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms