RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 CSPP1Q1MSJ5 1256 aa12.78□□□□□ -0.36
SIM1-202ENST00000369208 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.36
SIM1-202ENST00000369208 RGL3Q3MIN7 710 aa12.76□□□□□ -0.37
SIM1-202ENST00000369208 TSPYL1Q9H0U9 437 aa12.76□□□□□ -0.37
SIM1-202ENST00000369208 OS9Q13438 667 aaPredicted RBP12.75□□□□□ -0.37
SIM1-202ENST00000369208 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
SIM1-202ENST00000369208 CARMIL2Q6F5E8 1435 aa12.75□□□□□ -0.37
SIM1-202ENST00000369208 GBP4Q96PP9 640 aa12.74□□□□□ -0.37
SIM1-202ENST00000369208 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
SIM1-202ENST00000369208 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
SIM1-202ENST00000369208 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
SIM1-202ENST00000369208 TCERG1O14776 1098 aaKnown RBP12.73□□□□□ -0.37
SIM1-202ENST00000369208 CFAP44Q96MT7 982 aa12.73□□□□□ -0.37
SIM1-202ENST00000369208 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
SIM1-202ENST00000369208 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
SIM1-202ENST00000369208 FGD1P98174 961 aa12.72□□□□□ -0.37
SIM1-202ENST00000369208 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
SIM1-202ENST00000369208 TEX35Q5T0J7 233 aa12.71□□□□□ -0.37
SIM1-202ENST00000369208 CCER2I3L3R5 266 aa12.7□□□□□ -0.38
SIM1-202ENST00000369208 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
SIM1-202ENST00000369208 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
SIM1-202ENST00000369208 PDIA4P13667 645 aaKnown RBP12.69□□□□□ -0.38
SIM1-202ENST00000369208 GPS2Q13227 327 aa12.69□□□□□ -0.38
SIM1-202ENST00000369208 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
SIM1-202ENST00000369208 CWC15Q9P013 229 aaKnown RBP12.69□□□□□ -0.38
SIM1-202ENST00000369208 PDS5BQ9NTI5 1447 aa12.69□□□□□ -0.38
SIM1-202ENST00000369208 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
SIM1-202ENST00000369208 EIF4G1Q04637 1599 aaKnown RBP12.68□□□□□ -0.38
SIM1-202ENST00000369208 MLECQ14165 292 aa12.68□□□□□ -0.38
SIM1-202ENST00000369208 KCNJ4P48050 445 aa12.67□□□□□ -0.38
SIM1-202ENST00000369208 BAZ1AQ9NRL2 1556 aaPredicted RBP12.67□□□□□ -0.38
SIM1-202ENST00000369208 RTF1Q92541 710 aaKnown RBP12.67□□□□□ -0.38
SIM1-202ENST00000369208 EID1Q9Y6B2 187 aa12.66□□□□□ -0.38
SIM1-202ENST00000369208 DDX11L8A8MPP1 907 aa12.66□□□□□ -0.38
SIM1-202ENST00000369208 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
SIM1-202ENST00000369208 TMF1P82094 1093 aa12.65□□□□□ -0.38
SIM1-202ENST00000369208 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
SIM1-202ENST00000369208 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.39
SIM1-202ENST00000369208 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
SIM1-202ENST00000369208 HDAC5Q9UQL6 1122 aa12.64□□□□□ -0.39
SIM1-202ENST00000369208 PHF14O94880 888 aa12.63□□□□□ -0.39
SIM1-202ENST00000369208 SKOR2Q2VWA4 1001 aaPredicted RBP12.63□□□□□ -0.39
SIM1-202ENST00000369208 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
SIM1-202ENST00000369208 CLSTN1O94985 981 aa12.62□□□□□ -0.39
SIM1-202ENST00000369208 MCCP23508 829 aa12.62□□□□□ -0.39
SIM1-202ENST00000369208 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
SIM1-202ENST00000369208 ISY1Q9ULR0 285 aaKnown RBP12.61□□□□□ -0.39
SIM1-202ENST00000369208 AEBP2Q6ZN18 517 aaPredicted RBP12.61□□□□□ -0.39
SIM1-202ENST00000369208 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
SIM1-202ENST00000369208 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
SIM1-202ENST00000369208 HSP90B1P14625 803 aaKnown RBP12.6□□□□□ -0.39
SIM1-202ENST00000369208 GOLGA6L4A6NEF3 574 aa12.6□□□□□ -0.39
SIM1-202ENST00000369208 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
SIM1-202ENST00000369208 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
SIM1-202ENST00000369208 G3V3G9 751 aa12.59□□□□□ -0.39
SIM1-202ENST00000369208 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
SIM1-202ENST00000369208 EIF3AQ14152 1382 aaKnown RBP12.58□□□□□ -0.4
SIM1-202ENST00000369208 SMARCA2P51531 1590 aa12.58□□□□□ -0.4
SIM1-202ENST00000369208 EFCAB2Q5VUJ9 269 aa12.57□□□□□ -0.4
SIM1-202ENST00000369208 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
SIM1-202ENST00000369208 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
SIM1-202ENST00000369208 DCAF8L1A6NGE4 600 aa12.56□□□□□ -0.4
SIM1-202ENST00000369208 PDCL3Q9H2J4 239 aa12.56□□□□□ -0.4
SIM1-202ENST00000369208 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
SIM1-202ENST00000369208 GGT6Q6P531 493 aa12.55□□□□□ -0.4
SIM1-202ENST00000369208 ZMYND15Q9H091 742 aa12.55□□□□□ -0.4
SIM1-202ENST00000369208 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
SIM1-202ENST00000369208 GNL2Q13823 731 aaKnown RBP12.54□□□□□ -0.4
SIM1-202ENST00000369208 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
SIM1-202ENST00000369208 SPAG9O60271 1321 aaKnown RBP12.54□□□□□ -0.4
SIM1-202ENST00000369208 HMGN5P82970 282 aaKnown RBP12.54□□□□□ -0.4
SIM1-202ENST00000369208 USP8P40818 1118 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 FAM13BQ9NYF5 915 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
SIM1-202ENST00000369208 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
SIM1-202ENST00000369208 CARMIL1Q5VZK9 1371 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 CCDC34Q96HJ3 373 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 CUX2O14529 1486 aa12.53□□□□□ -0.4
SIM1-202ENST00000369208 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.4
SIM1-202ENST00000369208 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
SIM1-202ENST00000369208 RSPH4AQ5TD94 716 aa12.51□□□□□ -0.41
SIM1-202ENST00000369208 DRC7Q8IY82 874 aa12.51□□□□□ -0.41
SIM1-202ENST00000369208 GPATCH3Q96I76 525 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 B4GALNT3Q6L9W6 998 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 KIAA1211Q6ZU35 1233 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 TNIKQ9UKE5 1360 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 STK11IPQ8N1F8 1099 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 DIAPH3Q9NSV4 1193 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 DCAF11Q8TEB1 546 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 SOX12O15370 315 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 NEFHP12036 1026 aa12.5□□□□□ -0.41
SIM1-202ENST00000369208 DEF6Q9H4E7 631 aa12.49□□□□□ -0.41
SIM1-202ENST00000369208 IRX3P78415 501 aaPredicted RBP12.49□□□□□ -0.41
SIM1-202ENST00000369208 FRAT1Q92837 279 aaPredicted RBP12.49□□□□□ -0.41
SIM1-202ENST00000369208 RDXP35241 583 aaKnown RBP12.49□□□□□ -0.41
SIM1-202ENST00000369208 TERF2IPQ9NYB0 399 aa12.48□□□□□ -0.41
SIM1-202ENST00000369208 ARHGAP35Q9NRY4 1499 aa12.48□□□□□ -0.41
SIM1-202ENST00000369208 SSR1P43307 286 aaKnown RBP12.48□□□□□ -0.41
SIM1-202ENST00000369208 GORABQ5T7V8 394 aa12.47□□□□□ -0.41
SIM1-202ENST00000369208 FMN1Q68DA7 1419 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms