RNA–Protein interactions for RNA: ENST00000368409.7

EFNA4-202, Transcript of ephrin A4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFNA4, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-202ENST00000368409 YEATS2Q9ULM3 1422 aa27.11■■□□□ 1.93
EFNA4-202ENST00000368409 TROQ12816 1431 aaPredicted RBP27.09■■□□□ 1.93
EFNA4-202ENST00000368409 SCAPERQ9BY12 1400 aa27.09■■□□□ 1.93
EFNA4-202ENST00000368409 ILDR1Q86SU0 546 aaPredicted RBP27.09■■□□□ 1.93
EFNA4-202ENST00000368409 PCF11O94913 1555 aaKnown RBP27.09■■□□□ 1.93
EFNA4-202ENST00000368409 ATP1B4Q9UN42 357 aaPredicted RBP27.08■■□□□ 1.93
EFNA4-202ENST00000368409 CDK11AQ9UQ88 783 aaPredicted RBP27.07■■□□□ 1.92
EFNA4-202ENST00000368409 FER1L4A9Z1Z3 1794 aa27.05■■□□□ 1.92
EFNA4-202ENST00000368409 CDC42BPBQ9Y5S2 1711 aa27.04■■□□□ 1.92
EFNA4-202ENST00000368409 CLIP1P30622 1438 aa27.04■■□□□ 1.92
EFNA4-202ENST00000368409 ARHGAP5Q13017 1502 aa27.02■■□□□ 1.92
EFNA4-202ENST00000368409 LMTK3Q96Q04 1460 aa27.02■■□□□ 1.92
EFNA4-202ENST00000368409 KDM5CP41229 1560 aa27.01■■□□□ 1.92
EFNA4-202ENST00000368409 CCDC18Q5T9S5 1454 aa27.01■■□□□ 1.91
EFNA4-202ENST00000368409 CASKIN1Q8WXD9 1431 aa27.01■■□□□ 1.91
EFNA4-202ENST00000368409 PREX2Q70Z35 1606 aa27.01■■□□□ 1.91
EFNA4-202ENST00000368409 EFCAB2Q5VUJ9 269 aa27■■□□□ 1.91
EFNA4-202ENST00000368409 ZNF518AQ6AHZ1 1483 aa26.99■■□□□ 1.91
EFNA4-202ENST00000368409 ATP10AO60312 1499 aa26.97■■□□□ 1.91
EFNA4-202ENST00000368409 C9orf84Q5VXU9 1444 aa26.96■■□□□ 1.91
EFNA4-202ENST00000368409 ARHGEF12Q9NZN5 1544 aa26.95■■□□□ 1.9
EFNA4-202ENST00000368409 FYCO1Q9BQS8 1478 aa26.94■■□□□ 1.9
EFNA4-202ENST00000368409 CDC42BPAQ5VT25 1732 aa26.94■■□□□ 1.9
EFNA4-202ENST00000368409 ITSN2Q9NZM3 1697 aa26.92■■□□□ 1.9
EFNA4-202ENST00000368409 ABCC1P33527 1531 aa26.91■■□□□ 1.9
EFNA4-202ENST00000368409 DIP2CQ9Y2E4 1556 aa26.9■■□□□ 1.9
EFNA4-202ENST00000368409 REREQ9P2R6 1566 aa26.89■■□□□ 1.9
EFNA4-202ENST00000368409 ABCA6Q8N139 1617 aa26.89■■□□□ 1.9
EFNA4-202ENST00000368409 MLH3Q9UHC1 1453 aa26.84■■□□□ 1.89
EFNA4-202ENST00000368409 PREX1Q8TCU6 1659 aa26.83■■□□□ 1.89
EFNA4-202ENST00000368409 MLECQ14165 292 aa26.83■■□□□ 1.89
EFNA4-202ENST00000368409 AFAP1Q8N556 730 aa26.83■■□□□ 1.89
EFNA4-202ENST00000368409 KIDINS220Q9ULH0 1771 aa26.8■■□□□ 1.88
EFNA4-202ENST00000368409 TRAPPC8Q9Y2L5 1435 aa26.79■■□□□ 1.88
EFNA4-202ENST00000368409 SAMD9LQ8IVG5 1584 aa26.76■■□□□ 1.87
EFNA4-202ENST00000368409 PLPPR3Q6T4P5 718 aa26.76■■□□□ 1.87
EFNA4-202ENST00000368409 AGLP35573 1532 aa26.75■■□□□ 1.87
EFNA4-202ENST00000368409 HSPA2P54652 639 aa26.74■■□□□ 1.87
EFNA4-202ENST00000368409 SETD1BQ9UPS6 1966 aaKnown RBP26.73■■□□□ 1.87
EFNA4-202ENST00000368409 C3P01024 1663 aa26.72■■□□□ 1.87
EFNA4-202ENST00000368409 GPATCH8Q9UKJ3 1502 aaKnown RBP26.71■■□□□ 1.87
EFNA4-202ENST00000368409 SYCP2Q9BX26 1530 aa26.7■■□□□ 1.87
EFNA4-202ENST00000368409 FBXO41Q8TF61 875 aa26.7■■□□□ 1.86
EFNA4-202ENST00000368409 MYT1LQ9UL68 1186 aa26.68■■□□□ 1.86
EFNA4-202ENST00000368409 INO80Q9ULG1 1556 aaPredicted RBP26.64■■□□□ 1.86
EFNA4-202ENST00000368409 STRCQ7RTU9 1775 aa26.63■■□□□ 1.85
EFNA4-202ENST00000368409 CEBPAP49715 358 aaPredicted RBP26.63■■□□□ 1.85
EFNA4-202ENST00000368409 PLEKHH2Q8IVE3 1493 aa26.61■■□□□ 1.85
EFNA4-202ENST00000368409 MROH2AA6NES4 1674 aa26.6■■□□□ 1.85
EFNA4-202ENST00000368409 ATP7AQ04656 1500 aa26.6■■□□□ 1.85
EFNA4-202ENST00000368409 TIAM1Q13009 1591 aa26.6■■□□□ 1.85
EFNA4-202ENST00000368409 KIAA1107Q9UPP5 1409 aa26.6■■□□□ 1.85
EFNA4-202ENST00000368409 EHBP1L1Q8N3D4 1523 aa26.6■■□□□ 1.85
EFNA4-202ENST00000368409 SUPT6HQ7KZ85 1726 aaKnown RBP26.59■■□□□ 1.85
EFNA4-202ENST00000368409 UHRF1BP1Q6BDS2 1440 aa26.59■■□□□ 1.85
EFNA4-202ENST00000368409 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.85
EFNA4-202ENST00000368409 PLXNC1O60486 1568 aa26.58■■□□□ 1.85
EFNA4-202ENST00000368409 ZNF777Q9ULD5 760 aaPredicted RBP26.58■■□□□ 1.85
EFNA4-202ENST00000368409 CCNB3Q8WWL7 1395 aa26.58■■□□□ 1.84
EFNA4-202ENST00000368409 CEP162Q5TB80 1403 aa26.56■■□□□ 1.84
EFNA4-202ENST00000368409 CNTLNQ9NXG0 1405 aa26.56■■□□□ 1.84
EFNA4-202ENST00000368409 SPAG9O60271 1321 aaKnown RBP26.54■■□□□ 1.84
EFNA4-202ENST00000368409 CFDP1Q9UEE9 299 aaPredicted RBP26.53■■□□□ 1.84
EFNA4-202ENST00000368409 ADGBQ8N7X0 1667 aa26.53■■□□□ 1.84
EFNA4-202ENST00000368409 HNRNPMP52272 730 aaKnown RBP eCLIP26.52■■□□□ 1.84
EFNA4-202ENST00000368409 CLTCQ00610 1675 aaKnown RBP26.49■■□□□ 1.83
EFNA4-202ENST00000368409 ESF1Q9H501 851 aaKnown RBP26.48■■□□□ 1.83
EFNA4-202ENST00000368409 A2MP01023 1474 aa26.48■■□□□ 1.83
EFNA4-202ENST00000368409 MBD5Q9P267 1494 aa26.44■■□□□ 1.82
EFNA4-202ENST00000368409 NPATQ14207 1427 aa26.44■■□□□ 1.82
EFNA4-202ENST00000368409 CERKQ8TCT0 537 aa26.43■■□□□ 1.82
EFNA4-202ENST00000368409 ZNF142P52746 1687 aaPredicted RBP26.41■■□□□ 1.82
EFNA4-202ENST00000368409 ZNF644Q9H582 1327 aaPredicted RBP26.4■■□□□ 1.82
EFNA4-202ENST00000368409 DMRT2Q9Y5R5 561 aa26.4■■□□□ 1.82
EFNA4-202ENST00000368409 MYO3AQ8NEV4 1616 aa26.39■■□□□ 1.81
EFNA4-202ENST00000368409 NCOA2Q15596 1464 aa26.38■■□□□ 1.81
EFNA4-202ENST00000368409 PTPRTO14522 1441 aa26.38■■□□□ 1.81
EFNA4-202ENST00000368409 ZMYM3Q14202 1370 aa26.37■■□□□ 1.81
EFNA4-202ENST00000368409 RTEL1-TNFRSF6BF6WH68 1400 aa26.37■■□□□ 1.81
EFNA4-202ENST00000368409 NCOA1Q15788 1441 aa26.37■■□□□ 1.81
EFNA4-202ENST00000368409 CAMSAP2Q08AD1 1489 aa26.35■■□□□ 1.81
EFNA4-202ENST00000368409 CAMSAP1Q5T5Y3 1602 aa26.34■■□□□ 1.81
EFNA4-202ENST00000368409 CCDC141Q6ZP82 1450 aa26.33■■□□□ 1.81
EFNA4-202ENST00000368409 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
EFNA4-202ENST00000368409 CEP170BQ9Y4F5 1589 aaPredicted RBP26.3■■□□□ 1.8
EFNA4-202ENST00000368409 ARHGEF5Q12774 1597 aa26.29■■□□□ 1.8
EFNA4-202ENST00000368409 VPS8Q8N3P4 1428 aa26.29■■□□□ 1.8
EFNA4-202ENST00000368409 LTBP4Q8N2S1 1624 aa26.28■■□□□ 1.8
EFNA4-202ENST00000368409 GGT6Q6P531 493 aa26.27■■□□□ 1.8
EFNA4-202ENST00000368409 DHX29Q7Z478 1369 aaKnown RBP26.27■■□□□ 1.8
EFNA4-202ENST00000368409 FAM135AQ9P2D6 1515 aa26.26■■□□□ 1.79
EFNA4-202ENST00000368409 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
EFNA4-202ENST00000368409 LRRC9Q6ZRR7 1453 aa26.25■■□□□ 1.79
EFNA4-202ENST00000368409 PLA2R1Q13018 1463 aa26.23■■□□□ 1.79
EFNA4-202ENST00000368409 MAP3K1Q13233 1512 aa26.21■■□□□ 1.79
EFNA4-202ENST00000368409 KDM5DQ9BY66 1539 aa26.21■■□□□ 1.79
EFNA4-202ENST00000368409 TCOF1Q13428 1488 aaKnown RBP26.19■■□□□ 1.78
EFNA4-202ENST00000368409 RSPH4AQ5TD94 716 aa26.19■■□□□ 1.78
EFNA4-202ENST00000368409 IQSEC2Q5JU85 1478 aa26.18■■□□□ 1.78
EFNA4-202ENST00000368409 MAST1Q9Y2H9 1570 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 267.2 ms