RNA–Protein interactions for RNA: ENST00000368356.8

FDPS-202, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FDPS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-202ENST00000368356 AKNAQ7Z591 1439 aa24.23■■□□□ 1.47
FDPS-202ENST00000368356 PREX2Q70Z35 1606 aa24.23■■□□□ 1.47
FDPS-202ENST00000368356 ARHGAP5Q13017 1502 aa24.21■■□□□ 1.47
FDPS-202ENST00000368356 CDC42BPBQ9Y5S2 1711 aa24.2■■□□□ 1.46
FDPS-202ENST00000368356 CDC42BPAQ5VT25 1732 aa24.19■■□□□ 1.46
FDPS-202ENST00000368356 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
FDPS-202ENST00000368356 DENND4BO75064 1496 aaPredicted RBP24.18■■□□□ 1.46
FDPS-202ENST00000368356 FRMPD1Q5SYB0 1578 aa24.17■■□□□ 1.46
FDPS-202ENST00000368356 ADGRL1O94910 1474 aa24.17■■□□□ 1.46
FDPS-202ENST00000368356 MYOM3Q5VTT5 1437 aa24.17■■□□□ 1.46
FDPS-202ENST00000368356 EFCAB2Q5VUJ9 269 aa24.17■■□□□ 1.46
FDPS-202ENST00000368356 RICTORQ6R327 1708 aa24.16■■□□□ 1.46
FDPS-202ENST00000368356 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
FDPS-202ENST00000368356 GPATCH8Q9UKJ3 1502 aaKnown RBP24.15■■□□□ 1.46
FDPS-202ENST00000368356 MIA2Q96PC5 1412 aa24.12■■□□□ 1.45
FDPS-202ENST00000368356 RRBP1Q9P2E9 1410 aaKnown RBP24.12■■□□□ 1.45
FDPS-202ENST00000368356 RAPGEF3O95398 923 aa24.11■■□□□ 1.45
FDPS-202ENST00000368356 FGD6Q6ZV73 1430 aa24.1■■□□□ 1.45
FDPS-202ENST00000368356 SCAPERQ9BY12 1400 aa24.1■■□□□ 1.45
FDPS-202ENST00000368356 POGZQ7Z3K3 1410 aa24.09■■□□□ 1.45
FDPS-202ENST00000368356 ZMYM4Q5VZL5 1548 aa24.09■■□□□ 1.45
FDPS-202ENST00000368356 ABCC1P33527 1531 aa24.07■■□□□ 1.44
FDPS-202ENST00000368356 TRIM26Q12899 539 aaPredicted RBP24.07■■□□□ 1.44
FDPS-202ENST00000368356 PTPN23Q9H3S7 1636 aa24.05■■□□□ 1.44
FDPS-202ENST00000368356 ARHGEF40Q8TER5 1519 aa24.04■■□□□ 1.44
FDPS-202ENST00000368356 CFDP1Q9UEE9 299 aaPredicted RBP24.04■■□□□ 1.44
FDPS-202ENST00000368356 ZNF518AQ6AHZ1 1483 aa24.04■■□□□ 1.44
FDPS-202ENST00000368356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.04■■□□□ 1.443e-6■□□□□ 10.4
FDPS-202ENST00000368356 TCOF1Q13428 1488 aaKnown RBP24.03■■□□□ 1.44
FDPS-202ENST00000368356 SAMD9LQ8IVG5 1584 aa24.03■■□□□ 1.44
FDPS-202ENST00000368356 MAGI2Q86UL8 1455 aa24.02■■□□□ 1.44
FDPS-202ENST00000368356 KDM5CP41229 1560 aa24■■□□□ 1.43
FDPS-202ENST00000368356 ZFYVE16Q7Z3T8 1539 aa24■■□□□ 1.43
FDPS-202ENST00000368356 PLEKHH2Q8IVE3 1493 aa23.99■■□□□ 1.43
FDPS-202ENST00000368356 SYCP2Q9BX26 1530 aa23.97■■□□□ 1.43
FDPS-202ENST00000368356 ZNF777Q9ULD5 760 aaPredicted RBP23.96■■□□□ 1.43
FDPS-202ENST00000368356 CAMSAP2Q08AD1 1489 aa23.96■■□□□ 1.43
FDPS-202ENST00000368356 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
FDPS-202ENST00000368356 HECW2Q9P2P5 1572 aa23.96■■□□□ 1.43
FDPS-202ENST00000368356 KIAA1107Q9UPP5 1409 aa23.94■■□□□ 1.42
FDPS-202ENST00000368356 ZNF644Q9H582 1327 aaPredicted RBP23.94■■□□□ 1.42
FDPS-202ENST00000368356 FAM50AQ14320 339 aaKnown RBP23.93■■□□□ 1.42
FDPS-202ENST00000368356 YEATS2Q9ULM3 1422 aa23.92■■□□□ 1.42
FDPS-202ENST00000368356 TRAPPC8Q9Y2L5 1435 aa23.92■■□□□ 1.42
FDPS-202ENST00000368356 MLH3Q9UHC1 1453 aa23.9■■□□□ 1.42
FDPS-202ENST00000368356 AFAP1Q8N556 730 aa23.9■■□□□ 1.42
FDPS-202ENST00000368356 KDM4FA0A1W2PPD8 638 aa23.88■■□□□ 1.41
FDPS-202ENST00000368356 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
FDPS-202ENST00000368356 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
FDPS-202ENST00000368356 ARHGEF5Q12774 1597 aa23.87■■□□□ 1.41
FDPS-202ENST00000368356 MBD5Q9P267 1494 aa23.86■■□□□ 1.41
FDPS-202ENST00000368356 ATP10AO60312 1499 aa23.85■■□□□ 1.41
FDPS-202ENST00000368356 DIP2CQ9Y2E4 1556 aa23.85■■□□□ 1.41
FDPS-202ENST00000368356 C9orf84Q5VXU9 1444 aa23.85■■□□□ 1.41
FDPS-202ENST00000368356 KIDINS220Q9ULH0 1771 aa23.84■■□□□ 1.41
FDPS-202ENST00000368356 ABCA6Q8N139 1617 aa23.84■■□□□ 1.41
FDPS-202ENST00000368356 HNRNPMP52272 730 aaKnown RBP eCLIP23.84■■□□□ 1.41
FDPS-202ENST00000368356 RSPH4AQ5TD94 716 aa23.84■■□□□ 1.41
FDPS-202ENST00000368356 MYT1LQ9UL68 1186 aa23.84■■□□□ 1.41
FDPS-202ENST00000368356 BCORL1Q5H9F3 1711 aa23.83■■□□□ 1.41
FDPS-202ENST00000368356 PCGF6Q9BYE7 350 aa23.83■■□□□ 1.4
FDPS-202ENST00000368356 CROCC2H7BZ55 1655 aa23.82■■□□□ 1.4
FDPS-202ENST00000368356 DAPK1P53355 1430 aa23.82■■□□□ 1.4
FDPS-202ENST00000368356 REREQ9P2R6 1566 aa23.82■■□□□ 1.4
FDPS-202ENST00000368356 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
FDPS-202ENST00000368356 ARID4BQ4LE39 1312 aaPredicted RBP23.81■■□□□ 1.4
FDPS-202ENST00000368356 ABCC5O15440 1437 aa23.81■■□□□ 1.4
FDPS-202ENST00000368356 ATP7AQ04656 1500 aa23.8■■□□□ 1.4
FDPS-202ENST00000368356 SIGLEC1Q9BZZ2 1709 aa23.8■■□□□ 1.4
FDPS-202ENST00000368356 CCDC141Q6ZP82 1450 aa23.79■■□□□ 1.4
FDPS-202ENST00000368356 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
FDPS-202ENST00000368356 SPAG9O60271 1321 aaKnown RBP23.79■■□□□ 1.4
FDPS-202ENST00000368356 PTPRKQ15262 1439 aa23.78■■□□□ 1.4
FDPS-202ENST00000368356 ITGAEP38570 1179 aa23.76■■□□□ 1.39
FDPS-202ENST00000368356 SHANK2Q9UPX8 1470 aa23.75■■□□□ 1.39
FDPS-202ENST00000368356 MAST1Q9Y2H9 1570 aa23.73■■□□□ 1.39
FDPS-202ENST00000368356 ADGBQ8N7X0 1667 aa23.72■■□□□ 1.39
FDPS-202ENST00000368356 MADDQ8WXG6 1647 aa23.72■■□□□ 1.39
FDPS-202ENST00000368356 RTEL1-TNFRSF6BF6WH68 1400 aa23.72■■□□□ 1.39
FDPS-202ENST00000368356 AGLP35573 1532 aa23.71■■□□□ 1.39
FDPS-202ENST00000368356 TSPY4P0CV99 314 aa23.71■■□□□ 1.39
FDPS-202ENST00000368356 TSPY10P0CW01 314 aa23.71■■□□□ 1.39
FDPS-202ENST00000368356 ADGRL2O95490 1459 aa23.69■■□□□ 1.38
FDPS-202ENST00000368356 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
FDPS-202ENST00000368356 FER1L4A9Z1Z3 1794 aa23.68■■□□□ 1.38
FDPS-202ENST00000368356 PLXNC1O60486 1568 aa23.67■■□□□ 1.38
FDPS-202ENST00000368356 RIMS1Q86UR5 1692 aaKnown RBP23.66■■□□□ 1.38
FDPS-202ENST00000368356 A2MP01023 1474 aa23.66■■□□□ 1.38
FDPS-202ENST00000368356 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
FDPS-202ENST00000368356 NCOA1Q15788 1441 aa23.64■■□□□ 1.37
FDPS-202ENST00000368356 MLECQ14165 292 aa23.63■■□□□ 1.37
FDPS-202ENST00000368356 PTPRMP28827 1452 aa23.63■■□□□ 1.37
FDPS-202ENST00000368356 GCC2Q8IWJ2 1684 aa23.63■■□□□ 1.37
FDPS-202ENST00000368356 HFM1A2PYH4 1435 aa23.62■■□□□ 1.37
FDPS-202ENST00000368356 ANKRD30AQ9BXX3 1397 aa23.62■■□□□ 1.37
FDPS-202ENST00000368356 NAIPQ13075 1403 aa23.59■■□□□ 1.37
FDPS-202ENST00000368356 SETD5Q9C0A6 1442 aa23.57■■□□□ 1.36
FDPS-202ENST00000368356 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
FDPS-202ENST00000368356 DHX29Q7Z478 1369 aaKnown RBP23.55■■□□□ 1.36
FDPS-202ENST00000368356 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms