RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
PTPRK-202ENST00000368205 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
PTPRK-202ENST00000368205 FAM205CA6NFA0 338 aa13.14□□□□□ -0.31
PTPRK-202ENST00000368205 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
PTPRK-202ENST00000368205 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
PTPRK-202ENST00000368205 SPNS2Q8IVW8 549 aa13.06□□□□□ -0.32
PTPRK-202ENST00000368205 KRTAP3-3Q9BYR6 98 aa13.06□□□□□ -0.32
PTPRK-202ENST00000368205 KRTAP3-2Q9BYR7 98 aa13.06□□□□□ -0.32
PTPRK-202ENST00000368205 KIF3CO14782 793 aa13.04□□□□□ -0.32
PTPRK-202ENST00000368205 GPR153Q6NV75 609 aa13.04□□□□□ -0.32
PTPRK-202ENST00000368205 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
PTPRK-202ENST00000368205 ERBB3P21860 1342 aa13.03□□□□□ -0.32
PTPRK-202ENST00000368205 MMRN1Q13201 1228 aa13□□□□□ -0.33
PTPRK-202ENST00000368205 C2orf72A6NCS6 295 aa12.99□□□□□ -0.33
PTPRK-202ENST00000368205 PPP1R37O75864 691 aa12.96□□□□□ -0.33
PTPRK-202ENST00000368205 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
PTPRK-202ENST00000368205 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
PTPRK-202ENST00000368205 ARSIQ5FYB1 569 aa12.94□□□□□ -0.34
PTPRK-202ENST00000368205 TMC2Q8TDI7 906 aa12.92□□□□□ -0.34
PTPRK-202ENST00000368205 SLC34A2O95436 690 aa12.91□□□□□ -0.34
PTPRK-202ENST00000368205 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
PTPRK-202ENST00000368205 ZNF687Q8N1G0 1237 aa12.91□□□□□ -0.34
PTPRK-202ENST00000368205 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPRK-202ENST00000368205 ZNF316A6NFI3 1004 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-202ENST00000368205 NKX1-1Q15270 411 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-202ENST00000368205 RYDENQ9NUL5 291 aaKnown RBP12.83□□□□□ -0.36
PTPRK-202ENST00000368205 PCDHGA4Q9Y5G9 962 aa12.82□□□□□ -0.36
PTPRK-202ENST00000368205 NUDT7P0C024 238 aa12.8□□□□□ -0.36
PTPRK-202ENST00000368205 FOXK1P85037 733 aa12.8□□□□□ -0.36
PTPRK-202ENST00000368205 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-202ENST00000368205 PTCD2Q8WV60 388 aaKnown RBP12.75□□□□□ -0.37
PTPRK-202ENST00000368205 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
PTPRK-202ENST00000368205 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
PTPRK-202ENST00000368205 DSG2Q14126 1118 aa12.72□□□□□ -0.37
PTPRK-202ENST00000368205 KDM4FA0A1W2PPD8 638 aa12.71□□□□□ -0.37
PTPRK-202ENST00000368205 PBX2P40425 430 aa12.7□□□□□ -0.38
PTPRK-202ENST00000368205 PTGER2P43116 358 aa12.7□□□□□ -0.38
PTPRK-202ENST00000368205 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-202ENST00000368205 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
PTPRK-202ENST00000368205 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPRK-202ENST00000368205 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
PTPRK-202ENST00000368205 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
PTPRK-202ENST00000368205 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-202ENST00000368205 POTEEQ6S8J3 1075 aa12.65□□□□□ -0.38
PTPRK-202ENST00000368205 TBC1D12O60347 775 aa12.64□□□□□ -0.39
PTPRK-202ENST00000368205 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
PTPRK-202ENST00000368205 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
PTPRK-202ENST00000368205 PPP1R15BQ5SWA1 713 aa12.59□□□□□ -0.39
PTPRK-202ENST00000368205 NCKAP5LQ9HCH0 1330 aa12.59□□□□□ -0.39
PTPRK-202ENST00000368205 PDE4AP27815 886 aa12.58□□□□□ -0.4
PTPRK-202ENST00000368205 AXIN2Q9Y2T1 843 aa12.58□□□□□ -0.4
PTPRK-202ENST00000368205 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
PTPRK-202ENST00000368205 DCAF8L2P0C7V8 631 aa12.57□□□□□ -0.4
PTPRK-202ENST00000368205 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
PTPRK-202ENST00000368205 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
PTPRK-202ENST00000368205 TK2O00142 265 aa12.49□□□□□ -0.41
PTPRK-202ENST00000368205 MFSD10Q14728 455 aa12.49□□□□□ -0.41
PTPRK-202ENST00000368205 ADGRD1Q6QNK2 874 aa12.49□□□□□ -0.41
PTPRK-202ENST00000368205 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
PTPRK-202ENST00000368205 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
PTPRK-202ENST00000368205 PSEN2P49810 448 aa12.46□□□□□ -0.41
PTPRK-202ENST00000368205 DMRTA1Q5VZB9 504 aa12.45□□□□□ -0.42
PTPRK-202ENST00000368205 ANO8Q9HCE9 1232 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-202ENST00000368205 HRO43593 1189 aa12.43□□□□□ -0.42
PTPRK-202ENST00000368205 FOSBP53539 338 aa12.42□□□□□ -0.42
PTPRK-202ENST00000368205 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
PTPRK-202ENST00000368205 KCNH8Q96L42 1107 aa12.42□□□□□ -0.42
PTPRK-202ENST00000368205 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
PTPRK-202ENST00000368205 EVI5O60447 810 aa12.39□□□□□ -0.43
PTPRK-202ENST00000368205 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
PTPRK-202ENST00000368205 KCNK17Q96T54 332 aa12.39□□□□□ -0.43
PTPRK-202ENST00000368205 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
PTPRK-202ENST00000368205 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-202ENST00000368205 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
PTPRK-202ENST00000368205 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
PTPRK-202ENST00000368205 SLC4A5Q9BY07 1137 aa12.35□□□□□ -0.43
PTPRK-202ENST00000368205 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
PTPRK-202ENST00000368205 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
PTPRK-202ENST00000368205 VPS9D1Q9Y2B5 631 aa12.33□□□□□ -0.44
PTPRK-202ENST00000368205 PTPREP23469 700 aa12.32□□□□□ -0.44
PTPRK-202ENST00000368205 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
PTPRK-202ENST00000368205 CAMK2BQ13554 666 aa12.31□□□□□ -0.44
PTPRK-202ENST00000368205 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
PTPRK-202ENST00000368205 ADAM33Q9BZ11 813 aa12.28□□□□□ -0.44
PTPRK-202ENST00000368205 ZBED2Q9BTP6 218 aa12.27□□□□□ -0.45
PTPRK-202ENST00000368205 BHMG1C9JSJ3 638 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-202ENST00000368205 PCDHGA10Q9Y5H3 936 aa12.25□□□□□ -0.45
PTPRK-202ENST00000368205 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
PTPRK-202ENST00000368205 PHF14O94880 888 aa12.22□□□□□ -0.45
PTPRK-202ENST00000368205 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
PTPRK-202ENST00000368205 FBXW7Q969H0 707 aa12.22□□□□□ -0.45
PTPRK-202ENST00000368205 RTN4Q9NQC3 1192 aaKnown RBP12.21□□□□□ -0.45
PTPRK-202ENST00000368205 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-202ENST00000368205 TYW1BQ6NUM6 668 aa12.2□□□□□ -0.46
PTPRK-202ENST00000368205 PPP1R3GB7ZBB8 358 aa12.19□□□□□ -0.46
PTPRK-202ENST00000368205 PLA2G2EQ9NZK7 142 aa12.19□□□□□ -0.46
PTPRK-202ENST00000368205 DPYSL4O14531 572 aa12.18□□□□□ -0.46
PTPRK-202ENST00000368205 EPAS1Q99814 870 aa12.16□□□□□ -0.46
PTPRK-202ENST00000368205 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
PTPRK-202ENST00000368205 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms