RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
XCL1-201ENST00000367818 MS4A4AQ96JQ5 239 aa12.21□□□□□ -0.45
XCL1-201ENST00000367818 SOX12O15370 315 aa12.2□□□□□ -0.46
XCL1-201ENST00000367818 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
XCL1-201ENST00000367818 PLA2G2EQ9NZK7 142 aa12.2□□□□□ -0.46
XCL1-201ENST00000367818 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.46
XCL1-201ENST00000367818 PBX2P40425 430 aa12.18□□□□□ -0.46
XCL1-201ENST00000367818 PHF8Q9UPP1 1060 aa12.14□□□□□ -0.47
XCL1-201ENST00000367818 HCSTQ9UBK5 93 aa12.12□□□□□ -0.47
XCL1-201ENST00000367818 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
XCL1-201ENST00000367818 RIOK3O14730 519 aaKnown RBP12.06□□□□□ -0.48
XCL1-201ENST00000367818 NUDT7P0C024 238 aa12.06□□□□□ -0.48
XCL1-201ENST00000367818 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
XCL1-201ENST00000367818 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
XCL1-201ENST00000367818 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
XCL1-201ENST00000367818 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
XCL1-201ENST00000367818 RNF25Q96BH1 459 aaPredicted RBP12.03□□□□□ -0.48
XCL1-201ENST00000367818 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
XCL1-201ENST00000367818 NLRP6P59044 892 aa12.01□□□□□ -0.49
XCL1-201ENST00000367818 ADGRD1Q6QNK2 874 aa12□□□□□ -0.49
XCL1-201ENST00000367818 KIF3CO14782 793 aa11.99□□□□□ -0.49
XCL1-201ENST00000367818 C2orf72A6NCS6 295 aa11.97□□□□□ -0.49
XCL1-201ENST00000367818 FBXO22Q8NEZ5 403 aa11.97□□□□□ -0.49
XCL1-201ENST00000367818 PCDHGA4Q9Y5G9 962 aa11.97□□□□□ -0.49
XCL1-201ENST00000367818 SLC34A2O95436 690 aa11.95□□□□□ -0.5
XCL1-201ENST00000367818 ARHGAP33O14559 1287 aa11.93□□□□□ -0.5
XCL1-201ENST00000367818 PSDA5PKW4 1024 aaPredicted RBP11.91□□□□□ -0.5
XCL1-201ENST00000367818 TK2O00142 265 aa11.9□□□□□ -0.5
XCL1-201ENST00000367818 HRO43593 1189 aa11.88□□□□□ -0.51
XCL1-201ENST00000367818 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
XCL1-201ENST00000367818 MFRPQ9BY79 579 aa11.86□□□□□ -0.51
XCL1-201ENST00000367818 DMRTA1Q5VZB9 504 aa11.84□□□□□ -0.51
XCL1-201ENST00000367818 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
XCL1-201ENST00000367818 TMC2Q8TDI7 906 aa11.83□□□□□ -0.52
XCL1-201ENST00000367818 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
XCL1-201ENST00000367818 RGS20O76081 388 aa11.81□□□□□ -0.52
XCL1-201ENST00000367818 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
XCL1-201ENST00000367818 PSEN2P49810 448 aa11.8□□□□□ -0.52
XCL1-201ENST00000367818 KDM4FA0A1W2PPD8 638 aa11.77□□□□□ -0.53
XCL1-201ENST00000367818 STAC3Q96MF2 364 aa11.77□□□□□ -0.53
XCL1-201ENST00000367818 IRX2Q9BZI1 471 aaPredicted RBP11.77□□□□□ -0.53
XCL1-201ENST00000367818 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
XCL1-201ENST00000367818 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
XCL1-201ENST00000367818 STK25O00506 426 aa11.71□□□□□ -0.53
XCL1-201ENST00000367818 PTCD2Q8WV60 388 aaKnown RBP11.71□□□□□ -0.53
XCL1-201ENST00000367818 PTPN5P54829 565 aa11.69□□□□□ -0.54
XCL1-201ENST00000367818 KCNH8Q96L42 1107 aa11.69□□□□□ -0.54
XCL1-201ENST00000367818 A0A0G2JS52 829 aa11.67□□□□□ -0.54
XCL1-201ENST00000367818 KCNK17Q96T54 332 aa11.67□□□□□ -0.54
XCL1-201ENST00000367818 VPS9D1Q9Y2B5 631 aa11.64□□□□□ -0.55
XCL1-201ENST00000367818 THSD4Q6ZMP0 1018 aa11.61□□□□□ -0.55
XCL1-201ENST00000367818 FOXK1P85037 733 aa11.6□□□□□ -0.55
XCL1-201ENST00000367818 PLPP6Q8IY26 295 aa11.59□□□□□ -0.55
XCL1-201ENST00000367818 TBC1D12O60347 775 aa11.58□□□□□ -0.56
XCL1-201ENST00000367818 PPP1R37O75864 691 aa11.57□□□□□ -0.56
XCL1-201ENST00000367818 SLC4A5Q9BY07 1137 aa11.56□□□□□ -0.56
XCL1-201ENST00000367818 GOLGA8CPA6NN73 597 aa11.52□□□□□ -0.57
XCL1-201ENST00000367818 BHMG1C9JSJ3 638 aaPredicted RBP11.52□□□□□ -0.57
XCL1-201ENST00000367818 WNT2BQ93097 391 aa11.52□□□□□ -0.57
XCL1-201ENST00000367818 BCL2L12Q9HB09 334 aa11.52□□□□□ -0.57
XCL1-201ENST00000367818 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
XCL1-201ENST00000367818 DSG2Q14126 1118 aa11.5□□□□□ -0.57
XCL1-201ENST00000367818 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
XCL1-201ENST00000367818 MRPL50Q8N5N7 158 aaKnown RBP11.49□□□□□ -0.57
XCL1-201ENST00000367818 ECM2O94769 699 aaPredicted RBP11.48□□□□□ -0.57
XCL1-201ENST00000367818 Q6ZNB5 142 aa11.48□□□□□ -0.57
XCL1-201ENST00000367818 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.57
XCL1-201ENST00000367818 PTPREP23469 700 aa11.45□□□□□ -0.58
XCL1-201ENST00000367818 OXER1Q8TDS5 423 aa11.44□□□□□ -0.58
XCL1-201ENST00000367818 NBPF3Q9H094 633 aa11.43□□□□□ -0.58
XCL1-201ENST00000367818 ITGBL1O95965 494 aaPredicted RBP11.41□□□□□ -0.58
XCL1-201ENST00000367818 FOSBP53539 338 aa11.41□□□□□ -0.58
XCL1-201ENST00000367818 RGL2O15211 777 aa11.41□□□□□ -0.58
XCL1-201ENST00000367818 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
XCL1-201ENST00000367818 JPH4Q96JJ6 628 aa11.35□□□□□ -0.59
XCL1-201ENST00000367818 ANKK1Q8NFD2 765 aa11.33□□□□□ -0.6
XCL1-201ENST00000367818 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
XCL1-201ENST00000367818 LAPTM4AQ15012 233 aa11.3□□□□□ -0.6
XCL1-201ENST00000367818 ZDHHC16Q969W1 377 aa11.3□□□□□ -0.6
XCL1-201ENST00000367818 PKD2Q13563 968 aa11.28□□□□□ -0.6
XCL1-201ENST00000367818 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
XCL1-201ENST00000367818 ANO8Q9HCE9 1232 aaPredicted RBP11.28□□□□□ -0.6
XCL1-201ENST00000367818 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
XCL1-201ENST00000367818 BCAMP50895 628 aa11.27□□□□□ -0.61
XCL1-201ENST00000367818 PPP1R15BQ5SWA1 713 aa11.27□□□□□ -0.61
XCL1-201ENST00000367818 PPP1R3GB7ZBB8 358 aa11.26□□□□□ -0.61
XCL1-201ENST00000367818 LCE2BO14633 110 aa11.26□□□□□ -0.61
XCL1-201ENST00000367818 CRISPLD2Q9H0B8 497 aa11.25□□□□□ -0.61
XCL1-201ENST00000367818 SOWAHBA6NEL2 793 aa11.24□□□□□ -0.61
XCL1-201ENST00000367818 KCNC4Q03721 635 aa11.24□□□□□ -0.61
XCL1-201ENST00000367818 EVI5O60447 810 aa11.23□□□□□ -0.61
XCL1-201ENST00000367818 TRAF7Q6Q0C0 670 aa11.23□□□□□ -0.61
XCL1-201ENST00000367818 PROX2Q3B8N5 592 aa11.22□□□□□ -0.61
XCL1-201ENST00000367818 LAPTM4BQ86VI4 370 aa11.21□□□□□ -0.61
XCL1-201ENST00000367818 HS6ST3Q8IZP7 471 aa11.2□□□□□ -0.62
XCL1-201ENST00000367818 GFRA3O60609 400 aa11.18□□□□□ -0.62
XCL1-201ENST00000367818 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
XCL1-201ENST00000367818 ZFRQ96KR1 1074 aaKnown RBP11.16□□□□□ -0.62
XCL1-201ENST00000367818 COL9A1P20849 921 aa11.16□□□□□ -0.62
XCL1-201ENST00000367818 PCDHGA10Q9Y5H3 936 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms