RNA–Protein interactions for RNA: ENST00000367067.8

CD55-205, Transcript of CD55 molecule (Cromer blood group), human

APPRIS ALT2 TSL 5 BASIC

Gene CD55, Length 1,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-205	ENST00000367067	ABCA9	Q8IUA7	1624 aa		31.88	■■■□□ 2.69
CD55-205	ENST00000367067	CAMSAP2	Q08AD1	1489 aa		31.86	■■■□□ 2.69
CD55-205	ENST00000367067	ZNF644	Q9H582	1327 aa	Predicted RBP	31.84	■■■□□ 2.69
CD55-205	ENST00000367067	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.82	■■■□□ 2.68
CD55-205	ENST00000367067	ARHGAP5	Q13017	1502 aa		31.82	■■■□□ 2.68
CD55-205	ENST00000367067	PLCH2	O75038	1416 aa		31.8	■■■□□ 2.68
CD55-205	ENST00000367067	DNMT1	P26358	1616 aa	Known RBP	31.77	■■■□□ 2.68
CD55-205	ENST00000367067	ARAP3	Q8WWN8	1544 aa		31.76	■■■□□ 2.68
CD55-205	ENST00000367067	SAMD9L	Q8IVG5	1584 aa		31.76	■■■□□ 2.67
CD55-205	ENST00000367067	PTPRK	Q15262	1439 aa		31.74	■■■□□ 2.67
CD55-205	ENST00000367067	DAPK1	P53355	1430 aa		31.71	■■■□□ 2.67
CD55-205	ENST00000367067	EFCAB2	Q5VUJ9	269 aa		31.69	■■■□□ 2.66
CD55-205	ENST00000367067	ABCC5	O15440	1437 aa		31.68	■■■□□ 2.66
CD55-205	ENST00000367067	DIP2B	Q9P265	1576 aa		31.67	■■■□□ 2.66
CD55-205	ENST00000367067	CROCC2	H7BZ55	1655 aa		31.66	■■■□□ 2.66
CD55-205	ENST00000367067	PLEKHH2	Q8IVE3	1493 aa		31.66	■■■□□ 2.66
CD55-205	ENST00000367067	GLI2	P10070	1586 aa		31.65	■■■□□ 2.66
CD55-205	ENST00000367067	ARHGEF5	Q12774	1597 aa		31.64	■■■□□ 2.66
CD55-205	ENST00000367067	CD109	Q6YHK3	1445 aa		31.64	■■■□□ 2.66
CD55-205	ENST00000367067	FANCA	O15360	1455 aa		31.63	■■■□□ 2.65
CD55-205	ENST00000367067	SYCP2	Q9BX26	1530 aa		31.62	■■■□□ 2.65
CD55-205	ENST00000367067	MBD5	Q9P267	1494 aa		31.62	■■■□□ 2.65
CD55-205	ENST00000367067	KIAA1107	Q9UPP5	1409 aa		31.61	■■■□□ 2.65
CD55-205	ENST00000367067	MAP3K4	Q9Y6R4	1608 aa		31.61	■■■□□ 2.65
CD55-205	ENST00000367067	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.6	■■■□□ 2.65	1e-6	■■■■□ 22.2
CD55-205	ENST00000367067	CHIC2	Q9UKJ5	165 aa		31.6	■■■□□ 2.65
CD55-205	ENST00000367067	ABCC1	P33527	1531 aa		31.59	■■■□□ 2.65
CD55-205	ENST00000367067	SETD5	Q9C0A6	1442 aa		31.58	■■■□□ 2.65
CD55-205	ENST00000367067	FAM69C	Q0P6D2	419 aa		31.57	■■■□□ 2.64
CD55-205	ENST00000367067	HFM1	A2PYH4	1435 aa		31.57	■■■□□ 2.64
CD55-205	ENST00000367067	RSPH4A	Q5TD94	716 aa		31.56	■■■□□ 2.64
CD55-205	ENST00000367067	ADGB	Q8N7X0	1667 aa		31.56	■■■□□ 2.64
CD55-205	ENST00000367067	AKNA	Q7Z591	1439 aa		31.56	■■■□□ 2.64
CD55-205	ENST00000367067	CCDC141	Q6ZP82	1450 aa		31.56	■■■□□ 2.64
CD55-205	ENST00000367067	CFAP74	Q9C0B2	1584 aa		31.55	■■■□□ 2.64
CD55-205	ENST00000367067	SHANK2	Q9UPX8	1470 aa		31.55	■■■□□ 2.64
CD55-205	ENST00000367067	KIF13A	Q9H1H9	1805 aa		31.54	■■■□□ 2.64
CD55-205	ENST00000367067	ROCK1	Q13464	1354 aa		31.54	■■■□□ 2.64
CD55-205	ENST00000367067	ARHGEF12	Q9NZN5	1544 aa		31.54	■■■□□ 2.64
CD55-205	ENST00000367067	GCC2	Q8IWJ2	1684 aa		31.52	■■■□□ 2.64
CD55-205	ENST00000367067	RAB3GAP2	Q9H2M9	1393 aa		31.52	■■■□□ 2.64
CD55-205	ENST00000367067	NAIP	Q13075	1403 aa		31.51	■■■□□ 2.63
CD55-205	ENST00000367067	TSPY4	P0CV99	314 aa		31.5	■■■□□ 2.63
CD55-205	ENST00000367067	TSPY10	P0CW01	314 aa		31.5	■■■□□ 2.63
CD55-205	ENST00000367067	HRC	P23327	699 aa		31.5	■■■□□ 2.63
CD55-205	ENST00000367067	RRP7BP	Q9NSQ0	103 aa		31.49	■■■□□ 2.63
CD55-205	ENST00000367067	C9orf84	Q5VXU9	1444 aa		31.49	■■■□□ 2.63
CD55-205	ENST00000367067	ADGRL2	O95490	1459 aa		31.49	■■■□□ 2.63
CD55-205	ENST00000367067	ADGRL1	O94910	1474 aa		31.48	■■■□□ 2.63
CD55-205	ENST00000367067	NCOA1	Q15788	1441 aa		31.45	■■■□□ 2.62
CD55-205	ENST00000367067	MAST1	Q9Y2H9	1570 aa		31.44	■■■□□ 2.62
CD55-205	ENST00000367067	NEO1	Q92859	1461 aa		31.44	■■■□□ 2.62
CD55-205	ENST00000367067	ANKRD30A	Q9BXX3	1397 aa		31.43	■■■□□ 2.62
CD55-205	ENST00000367067	TRAPPC8	Q9Y2L5	1435 aa		31.43	■■■□□ 2.62
CD55-205	ENST00000367067	TSPOAP1	O95153	1857 aa		31.43	■■■□□ 2.62
CD55-205	ENST00000367067	PPRC1	Q5VV67	1664 aa	Known RBP	31.42	■■■□□ 2.62
CD55-205	ENST00000367067	SCAPER	Q9BY12	1400 aa		31.42	■■■□□ 2.62
CD55-205	ENST00000367067	CCER1	Q8TC90	406 aa	Predicted RBP	31.39	■■■□□ 2.62
CD55-205	ENST00000367067	AFAP1	Q8N556	730 aa		31.34	■■■□□ 2.61
CD55-205	ENST00000367067	KDM6B	O15054	1643 aa		31.34	■■■□□ 2.61
CD55-205	ENST00000367067	PLXNC1	O60486	1568 aa		31.33	■■■□□ 2.61
CD55-205	ENST00000367067	TEX14	Q8IWB6	1497 aa		31.32	■■■□□ 2.6
CD55-205	ENST00000367067	ZNF518A	Q6AHZ1	1483 aa		31.31	■■■□□ 2.6
CD55-205	ENST00000367067	SPAG9	O60271	1321 aa	Known RBP	31.3	■■■□□ 2.6
CD55-205	ENST00000367067	KIF15	Q9NS87	1388 aa		31.3	■■■□□ 2.6
CD55-205	ENST00000367067	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.29	■■■□□ 2.6
CD55-205	ENST00000367067	DHX57	Q6P158	1386 aa	Known RBP	31.28	■■■□□ 2.6
CD55-205	ENST00000367067	POGZ	Q7Z3K3	1410 aa		31.28	■■■□□ 2.6
CD55-205	ENST00000367067	ZFYVE16	Q7Z3T8	1539 aa		31.27	■■■□□ 2.6
CD55-205	ENST00000367067	INO80	Q9ULG1	1556 aa	Predicted RBP	31.27	■■■□□ 2.6
CD55-205	ENST00000367067	ANKRD50	Q9ULJ7	1429 aa		31.25	■■■□□ 2.59
CD55-205	ENST00000367067	DENND4B	O75064	1496 aa	Predicted RBP	31.25	■■■□□ 2.59
CD55-205	ENST00000367067	ATP7A	Q04656	1500 aa		31.24	■■■□□ 2.59
CD55-205	ENST00000367067	KDM5C	P41229	1560 aa		31.24	■■■□□ 2.59
CD55-205	ENST00000367067	TRH	P20396	242 aa	Predicted RBP	31.24	■■■□□ 2.59
CD55-205	ENST00000367067	RICTOR	Q6R327	1708 aa		31.22	■■■□□ 2.59
CD55-205	ENST00000367067	ACIN1	Q9UKV3	1341 aa	Known RBP	31.21	■■■□□ 2.59
CD55-205	ENST00000367067	KIDINS220	Q9ULH0	1771 aa		31.19	■■■□□ 2.58
CD55-205	ENST00000367067	DUOX2	Q9NRD8	1548 aa		31.19	■■■□□ 2.58
CD55-205	ENST00000367067	HECW2	Q9P2P5	1572 aa		31.16	■■■□□ 2.58
CD55-205	ENST00000367067	RAPGEF3	O95398	923 aa		31.15	■■■□□ 2.58
CD55-205	ENST00000367067	MYT1L	Q9UL68	1186 aa		31.15	■■■□□ 2.58
CD55-205	ENST00000367067	MLH3	Q9UHC1	1453 aa		31.15	■■■□□ 2.58
CD55-205	ENST00000367067	TRIM52	Q96A61	297 aa		31.14	■■■□□ 2.58
CD55-205	ENST00000367067	FRMPD1	Q5SYB0	1578 aa		31.13	■■■□□ 2.57
CD55-205	ENST00000367067	ERBIN	Q96RT1	1412 aa		31.11	■■■□□ 2.57
CD55-205	ENST00000367067	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.11	■■■□□ 2.57
CD55-205	ENST00000367067	CLSPN	Q9HAW4	1339 aa		31.11	■■■□□ 2.57
CD55-205	ENST00000367067	ZEB1	P37275	1124 aa	Predicted RBP	31.1	■■■□□ 2.57
CD55-205	ENST00000367067	ZMYM4	Q5VZL5	1548 aa		31.05	■■■□□ 2.56
CD55-205	ENST00000367067	ABCA6	Q8N139	1617 aa		31.03	■■■□□ 2.56
CD55-205	ENST00000367067	UNC13B	O14795	1591 aa		31.01	■■■□□ 2.55
CD55-205	ENST00000367067	DHX29	Q7Z478	1369 aa	Known RBP	31	■■■□□ 2.55
CD55-205	ENST00000367067	MPHOSPH9	Q99550	1183 aa		31	■■■□□ 2.55
CD55-205	ENST00000367067	KDM5D	Q9BY66	1539 aa		30.99	■■■□□ 2.55
CD55-205	ENST00000367067	EIF2AK4	Q9P2K8	1649 aa	Known RBP	30.99	■■■□□ 2.55
CD55-205	ENST00000367067	PZP	P20742	1482 aa		30.98	■■■□□ 2.55
CD55-205	ENST00000367067	DIP2C	Q9Y2E4	1556 aa		30.98	■■■□□ 2.55
CD55-205	ENST00000367067	A2M	P01023	1474 aa		30.97	■■■□□ 2.55
CD55-205	ENST00000367067	NUP155	O75694	1391 aa		30.97	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms