RNA–Protein interactions for RNA: ENST00000366983.5

ATF3-204, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-204ENST00000366983 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
ATF3-204ENST00000366983 PCF11O94913 1555 aaKnown RBP13.58□□□□□ -0.24
ATF3-204ENST00000366983 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
ATF3-204ENST00000366983 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
ATF3-204ENST00000366983 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
ATF3-204ENST00000366983 FYCO1Q9BQS8 1478 aa13.55□□□□□ -0.24
ATF3-204ENST00000366983 KDM5CP41229 1560 aa13.54□□□□□ -0.24
ATF3-204ENST00000366983 ZNF518AQ6AHZ1 1483 aa13.54□□□□□ -0.24
ATF3-204ENST00000366983 PREX2Q70Z35 1606 aa13.53□□□□□ -0.24
ATF3-204ENST00000366983 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.25
ATF3-204ENST00000366983 RIMS1Q86UR5 1692 aaKnown RBP13.52□□□□□ -0.25
ATF3-204ENST00000366983 SIGLEC1Q9BZZ2 1709 aa13.51□□□□□ -0.25
ATF3-204ENST00000366983 REREQ9P2R6 1566 aa13.51□□□□□ -0.25
ATF3-204ENST00000366983 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
ATF3-204ENST00000366983 YEATS2Q9ULM3 1422 aa13.5□□□□□ -0.25
ATF3-204ENST00000366983 FER1L4A9Z1Z3 1794 aa13.5□□□□□ -0.25
ATF3-204ENST00000366983 C9orf84Q5VXU9 1444 aa13.49□□□□□ -0.25
ATF3-204ENST00000366983 CDC42BPBQ9Y5S2 1711 aa13.49□□□□□ -0.25
ATF3-204ENST00000366983 ABCC1P33527 1531 aa13.49□□□□□ -0.25
ATF3-204ENST00000366983 ARHGEF12Q9NZN5 1544 aa13.48□□□□□ -0.25
ATF3-204ENST00000366983 ARID4BQ4LE39 1312 aaPredicted RBP13.47□□□□□ -0.25
ATF3-204ENST00000366983 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
ATF3-204ENST00000366983 ATP10AO60312 1499 aa13.47□□□□□ -0.25
ATF3-204ENST00000366983 LMTK3Q96Q04 1460 aa13.47□□□□□ -0.25
ATF3-204ENST00000366983 ITSN2Q9NZM3 1697 aa13.47□□□□□ -0.25
ATF3-204ENST00000366983 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
ATF3-204ENST00000366983 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
ATF3-204ENST00000366983 MLH3Q9UHC1 1453 aa13.44□□□□□ -0.26
ATF3-204ENST00000366983 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
ATF3-204ENST00000366983 ATP1B4Q9UN42 357 aaPredicted RBP13.44□□□□□ -0.26
ATF3-204ENST00000366983 ABCA6Q8N139 1617 aa13.43□□□□□ -0.26
ATF3-204ENST00000366983 AGLP35573 1532 aa13.41□□□□□ -0.26
ATF3-204ENST00000366983 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
ATF3-204ENST00000366983 SAMD9LQ8IVG5 1584 aa13.39□□□□□ -0.27
ATF3-204ENST00000366983 EHBP1L1Q8N3D4 1523 aa13.38□□□□□ -0.27
ATF3-204ENST00000366983 KIDINS220Q9ULH0 1771 aa13.37□□□□□ -0.27
ATF3-204ENST00000366983 PLEKHH2Q8IVE3 1493 aa13.37□□□□□ -0.27
ATF3-204ENST00000366983 SYCP2Q9BX26 1530 aa13.36□□□□□ -0.27
ATF3-204ENST00000366983 TRAPPC8Q9Y2L5 1435 aa13.36□□□□□ -0.27
ATF3-204ENST00000366983 INO80Q9ULG1 1556 aaPredicted RBP13.36□□□□□ -0.27
ATF3-204ENST00000366983 GPATCH8Q9UKJ3 1502 aaKnown RBP13.35□□□□□ -0.27
ATF3-204ENST00000366983 ILDR1Q86SU0 546 aaPredicted RBP13.35□□□□□ -0.27
ATF3-204ENST00000366983 KIAA1107Q9UPP5 1409 aa13.34□□□□□ -0.27
ATF3-204ENST00000366983 PLXNC1O60486 1568 aa13.33□□□□□ -0.28
ATF3-204ENST00000366983 AFAP1Q8N556 730 aa13.33□□□□□ -0.28
ATF3-204ENST00000366983 MROH2AA6NES4 1674 aa13.33□□□□□ -0.28
ATF3-204ENST00000366983 ATP7AQ04656 1500 aa13.33□□□□□ -0.28
ATF3-204ENST00000366983 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
ATF3-204ENST00000366983 CEP162Q5TB80 1403 aa13.32□□□□□ -0.28
ATF3-204ENST00000366983 CNTLNQ9NXG0 1405 aa13.32□□□□□ -0.28
ATF3-204ENST00000366983 MTUS2Q5JR59 1369 aa13.32□□□□□ -0.28
ATF3-204ENST00000366983 C3P01024 1663 aa13.31□□□□□ -0.28
ATF3-204ENST00000366983 MLECQ14165 292 aa13.29□□□□□ -0.28
ATF3-204ENST00000366983 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
ATF3-204ENST00000366983 UHRF1BP1Q6BDS2 1440 aa13.29□□□□□ -0.28
ATF3-204ENST00000366983 ADGBQ8N7X0 1667 aa13.28□□□□□ -0.28
ATF3-204ENST00000366983 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.28
ATF3-204ENST00000366983 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
ATF3-204ENST00000366983 SETD1BQ9UPS6 1966 aaKnown RBP13.25□□□□□ -0.29
ATF3-204ENST00000366983 FAM135AQ9P2D6 1515 aa13.25□□□□□ -0.29
ATF3-204ENST00000366983 NPATQ14207 1427 aa13.25□□□□□ -0.29
ATF3-204ENST00000366983 FBXO41Q8TF61 875 aa13.25□□□□□ -0.29
ATF3-204ENST00000366983 A2MP01023 1474 aa13.24□□□□□ -0.29
ATF3-204ENST00000366983 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
ATF3-204ENST00000366983 CFDP1Q9UEE9 299 aaPredicted RBP13.24□□□□□ -0.29
ATF3-204ENST00000366983 POTEDQ86YR6 584 aa13.23□□□□□ -0.29
ATF3-204ENST00000366983 ZNF142P52746 1687 aaPredicted RBP13.23□□□□□ -0.29
ATF3-204ENST00000366983 MBD5Q9P267 1494 aa13.23□□□□□ -0.29
ATF3-204ENST00000366983 RTEL1-TNFRSF6BF6WH68 1400 aa13.22□□□□□ -0.29
ATF3-204ENST00000366983 STRCQ7RTU9 1775 aa13.22□□□□□ -0.29
ATF3-204ENST00000366983 MSH5O43196 834 aa13.22□□□□□ -0.29
ATF3-204ENST00000366983 HSPA2P54652 639 aa13.22□□□□□ -0.29
ATF3-204ENST00000366983 NCOA2Q15596 1464 aa13.22□□□□□ -0.29
ATF3-204ENST00000366983 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
ATF3-204ENST00000366983 ESF1Q9H501 851 aaKnown RBP13.21□□□□□ -0.29
ATF3-204ENST00000366983 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
ATF3-204ENST00000366983 CCDC141Q6ZP82 1450 aa13.21□□□□□ -0.3
ATF3-204ENST00000366983 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
ATF3-204ENST00000366983 MAP3K1Q13233 1512 aa13.2□□□□□ -0.3
ATF3-204ENST00000366983 CAMSAP2Q08AD1 1489 aa13.2□□□□□ -0.3
ATF3-204ENST00000366983 CLTCQ00610 1675 aaKnown RBP13.2□□□□□ -0.3
ATF3-204ENST00000366983 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
ATF3-204ENST00000366983 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
ATF3-204ENST00000366983 CEBPAP49715 358 aaPredicted RBP13.18□□□□□ -0.3
ATF3-204ENST00000366983 PTPRTO14522 1441 aa13.18□□□□□ -0.3
ATF3-204ENST00000366983 HNRNPMP52272 730 aaKnown RBP eCLIP13.17□□□□□ -0.3
ATF3-204ENST00000366983 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
ATF3-204ENST00000366983 LRRC9Q6ZRR7 1453 aa13.16□□□□□ -0.3
ATF3-204ENST00000366983 NCOA1Q15788 1441 aa13.16□□□□□ -0.3
ATF3-204ENST00000366983 PPP6R1Q9UPN7 881 aa13.16□□□□□ -0.3
ATF3-204ENST00000366983 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
ATF3-204ENST00000366983 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
ATF3-204ENST00000366983 KDM5DQ9BY66 1539 aa13.15□□□□□ -0.3
ATF3-204ENST00000366983 MAST1Q9Y2H9 1570 aa13.15□□□□□ -0.3
ATF3-204ENST00000366983 RSPH4AQ5TD94 716 aa13.14□□□□□ -0.31
ATF3-204ENST00000366983 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
ATF3-204ENST00000366983 IQSEC2Q5JU85 1478 aa13.13□□□□□ -0.31
ATF3-204ENST00000366983 CAMSAP1Q5T5Y3 1602 aa13.13□□□□□ -0.31
ATF3-204ENST00000366983 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
ATF3-204ENST00000366983 PTPRKQ15262 1439 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms