RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 GPATCH8Q9UKJ3 1502 aaKnown RBP24.09■■□□□ 1.45
CNIH4-204ENST00000366860 MIA2Q96PC5 1412 aa24.08■■□□□ 1.44
CNIH4-204ENST00000366860 ARHGAP5Q13017 1502 aa24.06■■□□□ 1.44
CNIH4-204ENST00000366860 FGD6Q6ZV73 1430 aa24.06■■□□□ 1.44
CNIH4-204ENST00000366860 PLCH2O75038 1416 aa24.04■■□□□ 1.44
CNIH4-204ENST00000366860 PTPN23Q9H3S7 1636 aa24.04■■□□□ 1.44
CNIH4-204ENST00000366860 CD109Q6YHK3 1445 aa24.03■■□□□ 1.44
CNIH4-204ENST00000366860 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
CNIH4-204ENST00000366860 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
CNIH4-204ENST00000366860 TEX14Q8IWB6 1497 aa24■■□□□ 1.43
CNIH4-204ENST00000366860 PPRC1Q5VV67 1664 aaKnown RBP23.99■■□□□ 1.43
CNIH4-204ENST00000366860 TCOF1Q13428 1488 aaKnown RBP23.99■■□□□ 1.43
CNIH4-204ENST00000366860 TSPOAP1O95153 1857 aa23.98■■□□□ 1.43
CNIH4-204ENST00000366860 FANCAO15360 1455 aa23.98■■□□□ 1.43
CNIH4-204ENST00000366860 CAMSAP2Q08AD1 1489 aa23.97■■□□□ 1.43
CNIH4-204ENST00000366860 PLEKHH2Q8IVE3 1493 aa23.97■■□□□ 1.43
CNIH4-204ENST00000366860 SAMD9LQ8IVG5 1584 aa23.97■■□□□ 1.43
CNIH4-204ENST00000366860 CFDP1Q9UEE9 299 aaPredicted RBP23.96■■□□□ 1.43
CNIH4-204ENST00000366860 NEO1Q92859 1461 aa23.95■■□□□ 1.42
CNIH4-204ENST00000366860 ABCC1P33527 1531 aa23.94■■□□□ 1.42
CNIH4-204ENST00000366860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.94■■□□□ 1.427e-7■■■■■ 52.8
CNIH4-204ENST00000366860 EFCAB2Q5VUJ9 269 aa23.91■■□□□ 1.42
CNIH4-204ENST00000366860 PPP6R1Q9UPN7 881 aa23.91■■□□□ 1.42
CNIH4-204ENST00000366860 ADRA2BP18089 450 aa23.9■■□□□ 1.42
CNIH4-204ENST00000366860 ARHGEF5Q12774 1597 aa23.89■■□□□ 1.41
CNIH4-204ENST00000366860 SYCP2Q9BX26 1530 aa23.89■■□□□ 1.41
CNIH4-204ENST00000366860 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.41
CNIH4-204ENST00000366860 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
CNIH4-204ENST00000366860 ADGRL1O94910 1474 aa23.87■■□□□ 1.41
CNIH4-204ENST00000366860 KIAA1107Q9UPP5 1409 aa23.87■■□□□ 1.41
CNIH4-204ENST00000366860 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
CNIH4-204ENST00000366860 TRHP20396 242 aaPredicted RBP23.85■■□□□ 1.41
CNIH4-204ENST00000366860 ZNF777Q9ULD5 760 aaPredicted RBP23.84■■□□□ 1.41
CNIH4-204ENST00000366860 CCDC141Q6ZP82 1450 aa23.82■■□□□ 1.4
CNIH4-204ENST00000366860 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
CNIH4-204ENST00000366860 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
CNIH4-204ENST00000366860 TRIM26Q12899 539 aaPredicted RBP23.79■■□□□ 1.4
CNIH4-204ENST00000366860 MBD5Q9P267 1494 aa23.79■■□□□ 1.4
CNIH4-204ENST00000366860 ADGBQ8N7X0 1667 aa23.79■■□□□ 1.4
CNIH4-204ENST00000366860 ZNF518AQ6AHZ1 1483 aa23.78■■□□□ 1.4
CNIH4-204ENST00000366860 ZNF644Q9H582 1327 aaPredicted RBP23.78■■□□□ 1.4
CNIH4-204ENST00000366860 DAPK1P53355 1430 aa23.77■■□□□ 1.4
CNIH4-204ENST00000366860 POGZQ7Z3K3 1410 aa23.77■■□□□ 1.4
CNIH4-204ENST00000366860 RICTORQ6R327 1708 aa23.77■■□□□ 1.4
CNIH4-204ENST00000366860 ARHGEF12Q9NZN5 1544 aa23.76■■□□□ 1.39
CNIH4-204ENST00000366860 MAST1Q9Y2H9 1570 aa23.76■■□□□ 1.39
CNIH4-204ENST00000366860 SCAPERQ9BY12 1400 aa23.76■■□□□ 1.39
CNIH4-204ENST00000366860 DENND4BO75064 1496 aaPredicted RBP23.75■■□□□ 1.39
CNIH4-204ENST00000366860 KDM5CP41229 1560 aa23.75■■□□□ 1.39
CNIH4-204ENST00000366860 RSPH4AQ5TD94 716 aa23.75■■□□□ 1.39
CNIH4-204ENST00000366860 ABCC5O15440 1437 aa23.72■■□□□ 1.39
CNIH4-204ENST00000366860 FRMPD1Q5SYB0 1578 aa23.71■■□□□ 1.39
CNIH4-204ENST00000366860 HECW2Q9P2P5 1572 aa23.71■■□□□ 1.39
CNIH4-204ENST00000366860 INO80Q9ULG1 1556 aaPredicted RBP23.71■■□□□ 1.39
CNIH4-204ENST00000366860 ZMYM4Q5VZL5 1548 aa23.7■■□□□ 1.38
CNIH4-204ENST00000366860 KDM6BO15054 1643 aa23.7■■□□□ 1.38
CNIH4-204ENST00000366860 PLXNC1O60486 1568 aa23.69■■□□□ 1.38
CNIH4-204ENST00000366860 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
CNIH4-204ENST00000366860 C9orf84Q5VXU9 1444 aa23.69■■□□□ 1.38
CNIH4-204ENST00000366860 TRAPPC8Q9Y2L5 1435 aa23.69■■□□□ 1.38
CNIH4-204ENST00000366860 ADGRL2O95490 1459 aa23.68■■□□□ 1.38
CNIH4-204ENST00000366860 HNRNPMP52272 730 aaKnown RBP eCLIP23.67■■□□□ 1.38
CNIH4-204ENST00000366860 ATP7AQ04656 1500 aa23.66■■□□□ 1.38
CNIH4-204ENST00000366860 GCC2Q8IWJ2 1684 aa23.65■■□□□ 1.38
CNIH4-204ENST00000366860 ROCK1Q13464 1354 aa23.64■■□□□ 1.37
CNIH4-204ENST00000366860 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
CNIH4-204ENST00000366860 TSPY4P0CV99 314 aa23.63■■□□□ 1.37
CNIH4-204ENST00000366860 TSPY10P0CW01 314 aa23.63■■□□□ 1.37
CNIH4-204ENST00000366860 MLH3Q9UHC1 1453 aa23.62■■□□□ 1.37
CNIH4-204ENST00000366860 KIDINS220Q9ULH0 1771 aa23.62■■□□□ 1.37
CNIH4-204ENST00000366860 PTPRKQ15262 1439 aa23.61■■□□□ 1.37
CNIH4-204ENST00000366860 ITGAEP38570 1179 aa23.61■■□□□ 1.37
CNIH4-204ENST00000366860 MAGI2Q86UL8 1455 aa23.61■■□□□ 1.37
CNIH4-204ENST00000366860 ANKRD30AQ9BXX3 1397 aa23.6■■□□□ 1.37
CNIH4-204ENST00000366860 SPAG9O60271 1321 aaKnown RBP23.59■■□□□ 1.37
CNIH4-204ENST00000366860 ARHGEF40Q8TER5 1519 aa23.58■■□□□ 1.36
CNIH4-204ENST00000366860 HFM1A2PYH4 1435 aa23.57■■□□□ 1.36
CNIH4-204ENST00000366860 COL17A1Q9UMD9 1497 aaPredicted RBP23.56■■□□□ 1.36
CNIH4-204ENST00000366860 ABCA6Q8N139 1617 aa23.56■■□□□ 1.36
CNIH4-204ENST00000366860 AFAP1Q8N556 730 aa23.56■■□□□ 1.36
CNIH4-204ENST00000366860 NCOA1Q15788 1441 aa23.55■■□□□ 1.36
CNIH4-204ENST00000366860 DIP2CQ9Y2E4 1556 aa23.54■■□□□ 1.36
CNIH4-204ENST00000366860 RAPGEF3O95398 923 aa23.54■■□□□ 1.36
CNIH4-204ENST00000366860 DUOX2Q9NRD8 1548 aa23.53■■□□□ 1.36
CNIH4-204ENST00000366860 KIF15Q9NS87 1388 aa23.52■■□□□ 1.36
CNIH4-204ENST00000366860 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
CNIH4-204ENST00000366860 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
CNIH4-204ENST00000366860 EIF2AK4Q9P2K8 1649 aaKnown RBP23.5■■□□□ 1.35
CNIH4-204ENST00000366860 REREQ9P2R6 1566 aa23.49■■□□□ 1.35
CNIH4-204ENST00000366860 NAIPQ13075 1403 aa23.49■■□□□ 1.35
CNIH4-204ENST00000366860 MYT1LQ9UL68 1186 aa23.48■■□□□ 1.35
CNIH4-204ENST00000366860 ERBINQ96RT1 1412 aa23.48■■□□□ 1.35
CNIH4-204ENST00000366860 BCORL1Q5H9F3 1711 aa23.45■■□□□ 1.34
CNIH4-204ENST00000366860 A2MP01023 1474 aa23.44■■□□□ 1.34
CNIH4-204ENST00000366860 SETD5Q9C0A6 1442 aa23.44■■□□□ 1.34
CNIH4-204ENST00000366860 YEATS2Q9ULM3 1422 aa23.44■■□□□ 1.34
CNIH4-204ENST00000366860 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
CNIH4-204ENST00000366860 RRP7BPQ9NSQ0 103 aa23.42■■□□□ 1.34
CNIH4-204ENST00000366860 ATP10AO60312 1499 aa23.41■■□□□ 1.34
CNIH4-204ENST00000366860 ACIN1Q9UKV3 1341 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms