RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 TMEM121BQ9BXQ6 578 aaPredicted RBP10.64□□□□□ -0.71
CNIH4-201ENST00000366856 NCKAP5LQ9HCH0 1330 aa10.63□□□□□ -0.71
CNIH4-201ENST00000366856 POTEB2H3BUK9 544 aa10.63□□□□□ -0.71
CNIH4-201ENST00000366856 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.63□□□□□ -0.71
CNIH4-201ENST00000366856 DDX27Q96GQ7 796 aaKnown RBP10.6□□□□□ -0.71
CNIH4-201ENST00000366856 C2orf72A6NCS6 295 aa10.59□□□□□ -0.71
CNIH4-201ENST00000366856 CRISPLD2Q9H0B8 497 aa10.59□□□□□ -0.71
CNIH4-201ENST00000366856 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
CNIH4-201ENST00000366856 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
CNIH4-201ENST00000366856 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
CNIH4-201ENST00000366856 GPHNQ9NQX3 736 aaPredicted RBP10.57□□□□□ -0.72
CNIH4-201ENST00000366856 PPP1R15BQ5SWA1 713 aa10.56□□□□□ -0.72
CNIH4-201ENST00000366856 DSG2Q14126 1118 aa10.55□□□□□ -0.72
CNIH4-201ENST00000366856 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
CNIH4-201ENST00000366856 SLAIN1Q8ND83 568 aa10.54□□□□□ -0.72
CNIH4-201ENST00000366856 LHX8Q68G74 356 aa10.52□□□□□ -0.73
CNIH4-201ENST00000366856 PLPP6Q8IY26 295 aa10.52□□□□□ -0.73
CNIH4-201ENST00000366856 MFSD10Q14728 455 aa10.51□□□□□ -0.73
CNIH4-201ENST00000366856 E2F4Q16254 413 aa10.51□□□□□ -0.73
CNIH4-201ENST00000366856 KIF3CO14782 793 aa10.5□□□□□ -0.73
CNIH4-201ENST00000366856 FOXK1P85037 733 aa10.49□□□□□ -0.73
CNIH4-201ENST00000366856 P3H3Q8IVL6 736 aa10.49□□□□□ -0.73
CNIH4-201ENST00000366856 KCNV2Q8TDN2 545 aa10.49□□□□□ -0.73
CNIH4-201ENST00000366856 UPF1Q92900 1129 aaKnown RBP eCLIP10.47□□□□□ -0.73
CNIH4-201ENST00000366856 NBR1Q14596 966 aa10.44□□□□□ -0.74
CNIH4-201ENST00000366856 OTUD5Q96G74 571 aa10.44□□□□□ -0.74
CNIH4-201ENST00000366856 DPYSL4O14531 572 aa10.4□□□□□ -0.74
CNIH4-201ENST00000366856 EMILIN3Q9NT22 766 aa10.4□□□□□ -0.74
CNIH4-201ENST00000366856 MAP3K9P80192 1104 aa10.38□□□□□ -0.75
CNIH4-201ENST00000366856 CAMK2BQ13554 666 aa10.38□□□□□ -0.75
CNIH4-201ENST00000366856 BCANQ96GW7 911 aa10.38□□□□□ -0.75
CNIH4-201ENST00000366856 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
CNIH4-201ENST00000366856 ARHGEF1Q92888 912 aaKnown RBP10.36□□□□□ -0.75
CNIH4-201ENST00000366856 DOK7Q18PE1 504 aa10.35□□□□□ -0.75
CNIH4-201ENST00000366856 RIMBP2O15034 1052 aa10.34□□□□□ -0.75
CNIH4-201ENST00000366856 TBC1D12O60347 775 aa10.32□□□□□ -0.76
CNIH4-201ENST00000366856 OXER1Q8TDS5 423 aa10.32□□□□□ -0.76
CNIH4-201ENST00000366856 ZNF316A6NFI3 1004 aaPredicted RBP10.31□□□□□ -0.76
CNIH4-201ENST00000366856 SNPHO15079 494 aa10.31□□□□□ -0.76
CNIH4-201ENST00000366856 PCDHGA4Q9Y5G9 962 aa10.31□□□□□ -0.76
CNIH4-201ENST00000366856 SEMA3EO15041 775 aa10.3□□□□□ -0.76
CNIH4-201ENST00000366856 HOXB3P14651 431 aaPredicted RBP10.3□□□□□ -0.76
CNIH4-201ENST00000366856 ARSIQ5FYB1 569 aa10.29□□□□□ -0.76
CNIH4-201ENST00000366856 KHSRPQ92945 711 aaKnown RBP eCLIP10.29□□□□□ -0.761e-11■■■■□ 19.9
CNIH4-201ENST00000366856 EVI5O60447 810 aa10.28□□□□□ -0.76
CNIH4-201ENST00000366856 SLC34A2O95436 690 aa10.28□□□□□ -0.76
CNIH4-201ENST00000366856 PTCD2Q8WV60 388 aaKnown RBP10.28□□□□□ -0.76
CNIH4-201ENST00000366856 NUDT7P0C024 238 aa10.27□□□□□ -0.77
CNIH4-201ENST00000366856 PDIA6Q15084 440 aa10.25□□□□□ -0.77
CNIH4-201ENST00000366856 ARIH1Q9Y4X5 557 aaPredicted RBP10.25□□□□□ -0.77
CNIH4-201ENST00000366856 GRXCR2A6NFK2 248 aa10.24□□□□□ -0.77
CNIH4-201ENST00000366856 SPDYE16A6NNV3 312 aaPredicted RBP10.24□□□□□ -0.77
CNIH4-201ENST00000366856 DDX12PQ92771 950 aa10.24□□□□□ -0.77
CNIH4-201ENST00000366856 TULP1O00294 542 aaPredicted RBP10.23□□□□□ -0.77
CNIH4-201ENST00000366856 FAM163AQ96GL9 167 aaPredicted RBP10.23□□□□□ -0.77
CNIH4-201ENST00000366856 MLLT3P42568 568 aaPredicted RBP10.22□□□□□ -0.77
CNIH4-201ENST00000366856 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
CNIH4-201ENST00000366856 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
CNIH4-201ENST00000366856 TESPA1A2RU30 521 aaPredicted RBP10.18□□□□□ -0.78
CNIH4-201ENST00000366856 ST18O60284 1047 aa10.17□□□□□ -0.78
CNIH4-201ENST00000366856 SMYD5Q6GMV2 418 aa10.17□□□□□ -0.78
CNIH4-201ENST00000366856 MARVELD3Q96A59 401 aa10.17□□□□□ -0.78
CNIH4-201ENST00000366856 HOXB1P14653 301 aaPredicted RBP10.16□□□□□ -0.78
CNIH4-201ENST00000366856 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
CNIH4-201ENST00000366856 LHX6Q9UPM6 363 aa10.15□□□□□ -0.78
CNIH4-201ENST00000366856 EMP3P54852 163 aa10.14□□□□□ -0.79
CNIH4-201ENST00000366856 RBM33Q96EV2 1170 aaKnown RBP10.14□□□□□ -0.79
CNIH4-201ENST00000366856 RBM26Q5T8P6 1007 aaKnown RBP10.12□□□□□ -0.79
CNIH4-201ENST00000366856 LMOD2Q6P5Q4 547 aa10.12□□□□□ -0.79
CNIH4-201ENST00000366856 ERBB3P21860 1342 aa10.11□□□□□ -0.79
CNIH4-201ENST00000366856 ANO8Q9HCE9 1232 aaPredicted RBP10.11□□□□□ -0.79
CNIH4-201ENST00000366856 KDM4FA0A1W2PPD8 638 aa10.09□□□□□ -0.79
CNIH4-201ENST00000366856 MAP3K7O43318 606 aa10.09□□□□□ -0.79
CNIH4-201ENST00000366856 PHF14O94880 888 aa10.09□□□□□ -0.79
CNIH4-201ENST00000366856 PTGER2P43116 358 aa10.09□□□□□ -0.79
CNIH4-201ENST00000366856 JPH4Q96JJ6 628 aa10.09□□□□□ -0.79
CNIH4-201ENST00000366856 PCDHGA10Q9Y5H3 936 aa10.09□□□□□ -0.79
CNIH4-201ENST00000366856 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
CNIH4-201ENST00000366856 FAM205CA6NFA0 338 aa10.08□□□□□ -0.8
CNIH4-201ENST00000366856 PPP4R3BQ5MIZ7 849 aa10.08□□□□□ -0.8
CNIH4-201ENST00000366856 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
CNIH4-201ENST00000366856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.08□□□□□ -0.8
CNIH4-201ENST00000366856 OSBPP22059 807 aa10.07□□□□□ -0.8
CNIH4-201ENST00000366856 FOSBP53539 338 aa10.07□□□□□ -0.8
CNIH4-201ENST00000366856 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
CNIH4-201ENST00000366856 TPRNQ4KMQ1 711 aa10.06□□□□□ -0.8
CNIH4-201ENST00000366856 ZDHHC16Q969W1 377 aa10.06□□□□□ -0.8
CNIH4-201ENST00000366856 EPAS1Q99814 870 aa10.06□□□□□ -0.8
CNIH4-201ENST00000366856 PRIM1P49642 420 aaKnown RBP10.05□□□□□ -0.8
CNIH4-201ENST00000366856 GPIHBP1Q8IV16 184 aa10.05□□□□□ -0.8
CNIH4-201ENST00000366856 PSDA5PKW4 1024 aaPredicted RBP10.04□□□□□ -0.8
CNIH4-201ENST00000366856 EN1Q05925 392 aaPredicted RBP10.03□□□□□ -0.8
CNIH4-201ENST00000366856 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
CNIH4-201ENST00000366856 FBXW7Q969H0 707 aa10.03□□□□□ -0.8
CNIH4-201ENST00000366856 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
CNIH4-201ENST00000366856 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
CNIH4-201ENST00000366856 CDHR5Q9HBB8 845 aa10.01□□□□□ -0.81
CNIH4-201ENST00000366856 PRKCSHP14314 528 aaPredicted RBP10□□□□□ -0.81
CNIH4-201ENST00000366856 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
CNIH4-201ENST00000366856 KCNK17Q96T54 332 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms