RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 MAGI3Q5TCQ9 1506 aa16.31■□□□□ 0.2
H3F3A-202ENST00000366814 ABCA9Q8IUA7 1624 aa16.28■□□□□ 0.2
H3F3A-202ENST00000366814 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
H3F3A-202ENST00000366814 CDK13Q14004 1512 aaKnown RBP16.28■□□□□ 0.2
H3F3A-202ENST00000366814 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
H3F3A-202ENST00000366814 CCNB3Q8WWL7 1395 aa16.27■□□□□ 0.19
H3F3A-202ENST00000366814 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
H3F3A-202ENST00000366814 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
H3F3A-202ENST00000366814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.19■□□□□ 0.181e-31■■■■□ 21.2
H3F3A-202ENST00000366814 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
H3F3A-202ENST00000366814 CCDC18Q5T9S5 1454 aa16.18■□□□□ 0.18
H3F3A-202ENST00000366814 ARAP3Q8WWN8 1544 aa16.18■□□□□ 0.18
H3F3A-202ENST00000366814 NEO1Q92859 1461 aa16.17■□□□□ 0.18
H3F3A-202ENST00000366814 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
H3F3A-202ENST00000366814 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
H3F3A-202ENST00000366814 RAPGEF3O95398 923 aa16.15■□□□□ 0.18
H3F3A-202ENST00000366814 TROQ12816 1431 aaPredicted RBP16.14■□□□□ 0.17
H3F3A-202ENST00000366814 ZBTB22O15209 634 aa16.14■□□□□ 0.17
H3F3A-202ENST00000366814 FANCAO15360 1455 aa16.14■□□□□ 0.17
H3F3A-202ENST00000366814 EHBP1L1Q8N3D4 1523 aa16.13■□□□□ 0.17
H3F3A-202ENST00000366814 AKNAQ7Z591 1439 aa16.12■□□□□ 0.17
H3F3A-202ENST00000366814 KDM4FA0A1W2PPD8 638 aa16.12■□□□□ 0.17
H3F3A-202ENST00000366814 SUPT6HQ7KZ85 1726 aaKnown RBP16.12■□□□□ 0.17
H3F3A-202ENST00000366814 KIF14Q15058 1648 aa16.12■□□□□ 0.17
H3F3A-202ENST00000366814 CFAP74Q9C0B2 1584 aa16.11■□□□□ 0.17
H3F3A-202ENST00000366814 PLCH2O75038 1416 aa16.11■□□□□ 0.17
H3F3A-202ENST00000366814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.1■□□□□ 0.17
H3F3A-202ENST00000366814 CLSPNQ9HAW4 1339 aa16.1■□□□□ 0.17
H3F3A-202ENST00000366814 MYO5CQ9NQX4 1742 aa16.1■□□□□ 0.17
H3F3A-202ENST00000366814 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
H3F3A-202ENST00000366814 DENND4BO75064 1496 aaPredicted RBP16.08■□□□□ 0.17
H3F3A-202ENST00000366814 ITGAEP38570 1179 aa16.08■□□□□ 0.17
H3F3A-202ENST00000366814 FAM50AQ14320 339 aaKnown RBP16.08■□□□□ 0.17
H3F3A-202ENST00000366814 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
H3F3A-202ENST00000366814 ADGRL1O94910 1474 aa16.05■□□□□ 0.16
H3F3A-202ENST00000366814 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
H3F3A-202ENST00000366814 FGD6Q6ZV73 1430 aa16.05■□□□□ 0.16
H3F3A-202ENST00000366814 SCAPERQ9BY12 1400 aa16.04■□□□□ 0.16
H3F3A-202ENST00000366814 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
H3F3A-202ENST00000366814 FRMPD1Q5SYB0 1578 aa16.04■□□□□ 0.16
H3F3A-202ENST00000366814 RICTORQ6R327 1708 aa16.03■□□□□ 0.16
H3F3A-202ENST00000366814 DHX57Q6P158 1386 aaKnown RBP16.03■□□□□ 0.16
H3F3A-202ENST00000366814 MYOM3Q5VTT5 1437 aa16.03■□□□□ 0.16
H3F3A-202ENST00000366814 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
H3F3A-202ENST00000366814 CDC42BPBQ9Y5S2 1711 aa16.01■□□□□ 0.15
H3F3A-202ENST00000366814 SETD5Q9C0A6 1442 aa16.01■□□□□ 0.15
H3F3A-202ENST00000366814 ARID4BQ4LE39 1312 aaPredicted RBP16.01■□□□□ 0.15
H3F3A-202ENST00000366814 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
H3F3A-202ENST00000366814 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
H3F3A-202ENST00000366814 ZNF777Q9ULD5 760 aaPredicted RBP15.98■□□□□ 0.15
H3F3A-202ENST00000366814 PREX2Q70Z35 1606 aa15.97■□□□□ 0.15
H3F3A-202ENST00000366814 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
H3F3A-202ENST00000366814 POGZQ7Z3K3 1410 aa15.97■□□□□ 0.15
H3F3A-202ENST00000366814 AFAP1Q8N556 730 aa15.96■□□□□ 0.15
H3F3A-202ENST00000366814 PTPN23Q9H3S7 1636 aa15.96■□□□□ 0.15
H3F3A-202ENST00000366814 ZMYM4Q5VZL5 1548 aa15.95■□□□□ 0.14
H3F3A-202ENST00000366814 ZFYVE16Q7Z3T8 1539 aa15.94■□□□□ 0.14
H3F3A-202ENST00000366814 MAGI2Q86UL8 1455 aa15.94■□□□□ 0.14
H3F3A-202ENST00000366814 CFDP1Q9UEE9 299 aaPredicted RBP15.94■□□□□ 0.14
H3F3A-202ENST00000366814 ARHGEF40Q8TER5 1519 aa15.94■□□□□ 0.14
H3F3A-202ENST00000366814 YEATS2Q9ULM3 1422 aa15.93■□□□□ 0.14
H3F3A-202ENST00000366814 GPATCH8Q9UKJ3 1502 aaKnown RBP15.93■□□□□ 0.14
H3F3A-202ENST00000366814 ZNF518AQ6AHZ1 1483 aa15.93■□□□□ 0.14
H3F3A-202ENST00000366814 MIA2Q96PC5 1412 aa15.92■□□□□ 0.14
H3F3A-202ENST00000366814 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
H3F3A-202ENST00000366814 HNRNPMP52272 730 aaKnown RBP eCLIP15.89■□□□□ 0.132e-40■□□□□ 10.6
H3F3A-202ENST00000366814 ABCC1P33527 1531 aa15.89■□□□□ 0.13
H3F3A-202ENST00000366814 TRAPPC8Q9Y2L5 1435 aa15.89■□□□□ 0.13
H3F3A-202ENST00000366814 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
H3F3A-202ENST00000366814 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
H3F3A-202ENST00000366814 ARHGEF12Q9NZN5 1544 aa15.88■□□□□ 0.13
H3F3A-202ENST00000366814 BCORL1Q5H9F3 1711 aa15.88■□□□□ 0.13
H3F3A-202ENST00000366814 ATP10AO60312 1499 aa15.88■□□□□ 0.13
H3F3A-202ENST00000366814 MLECQ14165 292 aa15.87■□□□□ 0.13
H3F3A-202ENST00000366814 KDM5CP41229 1560 aa15.87■□□□□ 0.13
H3F3A-202ENST00000366814 SAMD9LQ8IVG5 1584 aa15.87■□□□□ 0.13
H3F3A-202ENST00000366814 ADAMTSL3P82987 1691 aa15.87■□□□□ 0.13
H3F3A-202ENST00000366814 HFM1A2PYH4 1435 aa15.87■□□□□ 0.13
H3F3A-202ENST00000366814 ZNF316A6NFI3 1004 aaPredicted RBP15.86■□□□□ 0.13
H3F3A-202ENST00000366814 HECW2Q9P2P5 1572 aa15.85■□□□□ 0.13
H3F3A-202ENST00000366814 C9orf84Q5VXU9 1444 aa15.85■□□□□ 0.13
H3F3A-202ENST00000366814 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
H3F3A-202ENST00000366814 SYCP2Q9BX26 1530 aa15.84■□□□□ 0.13
H3F3A-202ENST00000366814 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
H3F3A-202ENST00000366814 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
H3F3A-202ENST00000366814 SIGLEC1Q9BZZ2 1709 aa15.83■□□□□ 0.13
H3F3A-202ENST00000366814 SPAG9O60271 1321 aaKnown RBP15.83■□□□□ 0.12
H3F3A-202ENST00000366814 KIAA1107Q9UPP5 1409 aa15.83■□□□□ 0.12
H3F3A-202ENST00000366814 MADDQ8WXG6 1647 aa15.82■□□□□ 0.12
H3F3A-202ENST00000366814 PTPRMP28827 1452 aa15.81■□□□□ 0.12
H3F3A-202ENST00000366814 PTPRKQ15262 1439 aa15.81■□□□□ 0.12
H3F3A-202ENST00000366814 DIP2CQ9Y2E4 1556 aa15.8■□□□□ 0.12
H3F3A-202ENST00000366814 RIMS1Q86UR5 1692 aaKnown RBP15.8■□□□□ 0.12
H3F3A-202ENST00000366814 GCC2Q8IWJ2 1684 aa15.8■□□□□ 0.12
H3F3A-202ENST00000366814 KIDINS220Q9ULH0 1771 aa15.8■□□□□ 0.12
H3F3A-202ENST00000366814 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
H3F3A-202ENST00000366814 ABCA6Q8N139 1617 aa15.79■□□□□ 0.12
H3F3A-202ENST00000366814 NAIPQ13075 1403 aa15.79■□□□□ 0.12
H3F3A-202ENST00000366814 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
H3F3A-202ENST00000366814 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms