RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 SCAPERQ9BY12 1400 aa16.99■□□□□ 0.31
PARP1-201ENST00000366790 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
PARP1-201ENST00000366790 PTPRMP28827 1452 aa16.99■□□□□ 0.31
PARP1-201ENST00000366790 PCF11O94913 1555 aaKnown RBP16.98■□□□□ 0.31
PARP1-201ENST00000366790 ZFYVE16Q7Z3T8 1539 aa16.98■□□□□ 0.31
PARP1-201ENST00000366790 FYCO1Q9BQS8 1478 aa16.96■□□□□ 0.31
PARP1-201ENST00000366790 MADDQ8WXG6 1647 aa16.96■□□□□ 0.3
PARP1-201ENST00000366790 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.3
PARP1-201ENST00000366790 ARID4BQ4LE39 1312 aaPredicted RBP16.96■□□□□ 0.3
PARP1-201ENST00000366790 ARHGAP5Q13017 1502 aa16.93■□□□□ 0.3
PARP1-201ENST00000366790 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
PARP1-201ENST00000366790 SIGLEC1Q9BZZ2 1709 aa16.92■□□□□ 0.3
PARP1-201ENST00000366790 ZNF518AQ6AHZ1 1483 aa16.92■□□□□ 0.3
PARP1-201ENST00000366790 KDM5CP41229 1560 aa16.91■□□□□ 0.3
PARP1-201ENST00000366790 PREX2Q70Z35 1606 aa16.91■□□□□ 0.3
PARP1-201ENST00000366790 RIMS1Q86UR5 1692 aaKnown RBP16.89■□□□□ 0.29
PARP1-201ENST00000366790 ATP10AO60312 1499 aa16.89■□□□□ 0.29
PARP1-201ENST00000366790 C9orf84Q5VXU9 1444 aa16.88■□□□□ 0.29
PARP1-201ENST00000366790 CDC42BPAQ5VT25 1732 aa16.87■□□□□ 0.29
PARP1-201ENST00000366790 ABCC1P33527 1531 aa16.86■□□□□ 0.29
PARP1-201ENST00000366790 MLH3Q9UHC1 1453 aa16.85■□□□□ 0.29
PARP1-201ENST00000366790 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
PARP1-201ENST00000366790 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
PARP1-201ENST00000366790 REREQ9P2R6 1566 aa16.84■□□□□ 0.29
PARP1-201ENST00000366790 FER1L4A9Z1Z3 1794 aa16.84■□□□□ 0.29
PARP1-201ENST00000366790 ITSN2Q9NZM3 1697 aa16.83■□□□□ 0.28
PARP1-201ENST00000366790 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
PARP1-201ENST00000366790 LMTK3Q96Q04 1460 aa16.81■□□□□ 0.28
PARP1-201ENST00000366790 TRAPPC8Q9Y2L5 1435 aa16.8■□□□□ 0.28
PARP1-201ENST00000366790 GPATCH8Q9UKJ3 1502 aaKnown RBP16.8■□□□□ 0.28
PARP1-201ENST00000366790 ABCA6Q8N139 1617 aa16.78■□□□□ 0.28
PARP1-201ENST00000366790 MLECQ14165 292 aa16.78■□□□□ 0.28
PARP1-201ENST00000366790 SAMD9LQ8IVG5 1584 aa16.77■□□□□ 0.28
PARP1-201ENST00000366790 AGLP35573 1532 aa16.77■□□□□ 0.28
PARP1-201ENST00000366790 KIDINS220Q9ULH0 1771 aa16.77■□□□□ 0.27
PARP1-201ENST00000366790 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
PARP1-201ENST00000366790 ILDR1Q86SU0 546 aaPredicted RBP16.75■□□□□ 0.27
PARP1-201ENST00000366790 KIAA1107Q9UPP5 1409 aa16.75■□□□□ 0.27
PARP1-201ENST00000366790 MTUS2Q5JR59 1369 aa16.75■□□□□ 0.27
PARP1-201ENST00000366790 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
PARP1-201ENST00000366790 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
PARP1-201ENST00000366790 MYT1LQ9UL68 1186 aa16.73■□□□□ 0.27
PARP1-201ENST00000366790 EHBP1L1Q8N3D4 1523 aa16.73■□□□□ 0.27
PARP1-201ENST00000366790 CCNB3Q8WWL7 1395 aa16.73■□□□□ 0.27
PARP1-201ENST00000366790 SYCP2Q9BX26 1530 aa16.72■□□□□ 0.27
PARP1-201ENST00000366790 CFDP1Q9UEE9 299 aaPredicted RBP16.71■□□□□ 0.27
PARP1-201ENST00000366790 ZNF777Q9ULD5 760 aaPredicted RBP16.7■□□□□ 0.26
PARP1-201ENST00000366790 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
PARP1-201ENST00000366790 TIAM1Q13009 1591 aa16.69■□□□□ 0.26
PARP1-201ENST00000366790 SPAG9O60271 1321 aaKnown RBP16.68■□□□□ 0.26
PARP1-201ENST00000366790 HNRNPMP52272 730 aaKnown RBP eCLIP16.67■□□□□ 0.26
PARP1-201ENST00000366790 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
PARP1-201ENST00000366790 INO80Q9ULG1 1556 aaPredicted RBP16.67■□□□□ 0.26
PARP1-201ENST00000366790 ATP7AQ04656 1500 aa16.66■□□□□ 0.26
PARP1-201ENST00000366790 HSPA2P54652 639 aa16.66■□□□□ 0.26
PARP1-201ENST00000366790 CNTLNQ9NXG0 1405 aa16.65■□□□□ 0.26
PARP1-201ENST00000366790 C3P01024 1663 aa16.65■□□□□ 0.26
PARP1-201ENST00000366790 CEBPAP49715 358 aaPredicted RBP16.64■□□□□ 0.25
PARP1-201ENST00000366790 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
PARP1-201ENST00000366790 MBD5Q9P267 1494 aa16.63■□□□□ 0.25
PARP1-201ENST00000366790 SUPT6HQ7KZ85 1726 aaKnown RBP16.63■□□□□ 0.25
PARP1-201ENST00000366790 MROH2AA6NES4 1674 aa16.62■□□□□ 0.25
PARP1-201ENST00000366790 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
PARP1-201ENST00000366790 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
PARP1-201ENST00000366790 ESF1Q9H501 851 aaKnown RBP16.61■□□□□ 0.25
PARP1-201ENST00000366790 A2MP01023 1474 aa16.61■□□□□ 0.25
PARP1-201ENST00000366790 NCOA2Q15596 1464 aa16.61■□□□□ 0.25
PARP1-201ENST00000366790 ADGBQ8N7X0 1667 aa16.6■□□□□ 0.25
PARP1-201ENST00000366790 FBXO41Q8TF61 875 aa16.6■□□□□ 0.25
PARP1-201ENST00000366790 RTEL1-TNFRSF6BF6WH68 1400 aa16.6■□□□□ 0.25
PARP1-201ENST00000366790 ZNF644Q9H582 1327 aaPredicted RBP16.59■□□□□ 0.25
PARP1-201ENST00000366790 LOC105371045A0A1W2PR82 267 aa16.58■□□□□ 0.24
PARP1-201ENST00000366790 MAP3K1Q13233 1512 aa16.58■□□□□ 0.24
PARP1-201ENST00000366790 NPATQ14207 1427 aa16.57■□□□□ 0.24
PARP1-201ENST00000366790 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
PARP1-201ENST00000366790 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
PARP1-201ENST00000366790 STRCQ7RTU9 1775 aa16.56■□□□□ 0.24
PARP1-201ENST00000366790 CCDC141Q6ZP82 1450 aa16.55■□□□□ 0.24
PARP1-201ENST00000366790 LRRC9Q6ZRR7 1453 aa16.55■□□□□ 0.24
PARP1-201ENST00000366790 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
PARP1-201ENST00000366790 ZMYM3Q14202 1370 aa16.54■□□□□ 0.24
PARP1-201ENST00000366790 ARHGEF5Q12774 1597 aa16.53■□□□□ 0.24
PARP1-201ENST00000366790 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
PARP1-201ENST00000366790 DHX29Q7Z478 1369 aaKnown RBP16.52■□□□□ 0.24
PARP1-201ENST00000366790 CLTCQ00610 1675 aaKnown RBP16.52■□□□□ 0.23
PARP1-201ENST00000366790 PTPRTO14522 1441 aa16.49■□□□□ 0.23
PARP1-201ENST00000366790 FAM135AQ9P2D6 1515 aa16.49■□□□□ 0.23
PARP1-201ENST00000366790 PTPRKQ15262 1439 aa16.48■□□□□ 0.23
PARP1-201ENST00000366790 GGT6Q6P531 493 aa16.48■□□□□ 0.23
PARP1-201ENST00000366790 MIA2Q96PC5 1412 aa16.47■□□□□ 0.23
PARP1-201ENST00000366790 CERKQ8TCT0 537 aa16.47■□□□□ 0.23
PARP1-201ENST00000366790 ZNF142P52746 1687 aaPredicted RBP16.46■□□□□ 0.23
PARP1-201ENST00000366790 NCOA1Q15788 1441 aa16.46■□□□□ 0.23
PARP1-201ENST00000366790 KANK4Q5T7N3 995 aaPredicted RBP16.45■□□□□ 0.22
PARP1-201ENST00000366790 MAST1Q9Y2H9 1570 aa16.45■□□□□ 0.22
PARP1-201ENST00000366790 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
PARP1-201ENST00000366790 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
PARP1-201ENST00000366790 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
PARP1-201ENST00000366790 MYO3AQ8NEV4 1616 aa16.44■□□□□ 0.22
PARP1-201ENST00000366790 CAMSAP1Q5T5Y3 1602 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms