RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 PREX2Q70Z35 1606 aa23.21■■□□□ 1.31
MRPL55-218ENST00000366747 ZMYM4Q5VZL5 1548 aa23.2■■□□□ 1.3
MRPL55-218ENST00000366747 MAP3K1Q13233 1512 aa23.19■■□□□ 1.3
MRPL55-218ENST00000366747 MAGI2Q86UL8 1455 aa23.19■■□□□ 1.3
MRPL55-218ENST00000366747 POGZQ7Z3K3 1410 aa23.19■■□□□ 1.3
MRPL55-218ENST00000366747 RICTORQ6R327 1708 aa23.19■■□□□ 1.3
MRPL55-218ENST00000366747 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
MRPL55-218ENST00000366747 TIAM1Q13009 1591 aa23.16■■□□□ 1.3
MRPL55-218ENST00000366747 GPATCH8Q9UKJ3 1502 aaKnown RBP23.15■■□□□ 1.3
MRPL55-218ENST00000366747 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
MRPL55-218ENST00000366747 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.3
MRPL55-218ENST00000366747 CDC42BPBQ9Y5S2 1711 aa23.14■■□□□ 1.3
MRPL55-218ENST00000366747 ARHGEF40Q8TER5 1519 aa23.13■■□□□ 1.29
MRPL55-218ENST00000366747 KDM4FA0A1W2PPD8 638 aa23.12■■□□□ 1.29
MRPL55-218ENST00000366747 CDC42BPAQ5VT25 1732 aa23.12■■□□□ 1.29
MRPL55-218ENST00000366747 ABCC1P33527 1531 aa23.11■■□□□ 1.29
MRPL55-218ENST00000366747 PLEKHH2Q8IVE3 1493 aa23.1■■□□□ 1.29
MRPL55-218ENST00000366747 ZFYVE16Q7Z3T8 1539 aa23.09■■□□□ 1.29
MRPL55-218ENST00000366747 KDM5CP41229 1560 aa23.09■■□□□ 1.29
MRPL55-218ENST00000366747 CFDP1Q9UEE9 299 aaPredicted RBP23.08■■□□□ 1.29
MRPL55-218ENST00000366747 LRRC9Q6ZRR7 1453 aa23.08■■□□□ 1.29
MRPL55-218ENST00000366747 KIAA1107Q9UPP5 1409 aa23.08■■□□□ 1.28
MRPL55-218ENST00000366747 SUPT6HQ7KZ85 1726 aaKnown RBP23.06■■□□□ 1.28
MRPL55-218ENST00000366747 ITSN2Q9NZM3 1697 aa23.06■■□□□ 1.28
MRPL55-218ENST00000366747 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
MRPL55-218ENST00000366747 APLP2Q06481 763 aa23.05■■□□□ 1.28
MRPL55-218ENST00000366747 MLH3Q9UHC1 1453 aa23.03■■□□□ 1.28
MRPL55-218ENST00000366747 SAMD9LQ8IVG5 1584 aa23.02■■□□□ 1.28
MRPL55-218ENST00000366747 YEATS2Q9ULM3 1422 aa23.02■■□□□ 1.28
MRPL55-218ENST00000366747 ARHGEF12Q9NZN5 1544 aa23.02■■□□□ 1.28
MRPL55-218ENST00000366747 AFAP1Q8N556 730 aa23.01■■□□□ 1.27
MRPL55-218ENST00000366747 HECW2Q9P2P5 1572 aa23.01■■□□□ 1.27
MRPL55-218ENST00000366747 TRAPPC8Q9Y2L5 1435 aa23■■□□□ 1.27
MRPL55-218ENST00000366747 ZNF777Q9ULD5 760 aaPredicted RBP23■■□□□ 1.27
MRPL55-218ENST00000366747 ATP10AO60312 1499 aa22.99■■□□□ 1.27
MRPL55-218ENST00000366747 C9orf84Q5VXU9 1444 aa22.99■■□□□ 1.27
MRPL55-218ENST00000366747 SYCP2Q9BX26 1530 aa22.98■■□□□ 1.27
MRPL55-218ENST00000366747 ARID4BQ4LE39 1312 aaPredicted RBP22.96■■□□□ 1.27
MRPL55-218ENST00000366747 REREQ9P2R6 1566 aa22.95■■□□□ 1.26
MRPL55-218ENST00000366747 KANK4Q5T7N3 995 aaPredicted RBP22.94■■□□□ 1.26
MRPL55-218ENST00000366747 RSPH4AQ5TD94 716 aa22.92■■□□□ 1.26
MRPL55-218ENST00000366747 MYT1LQ9UL68 1186 aa22.92■■□□□ 1.26
MRPL55-218ENST00000366747 MIA2Q96PC5 1412 aa22.91■■□□□ 1.26
MRPL55-218ENST00000366747 BCORL1Q5H9F3 1711 aa22.91■■□□□ 1.26
MRPL55-218ENST00000366747 ADAMTSL3P82987 1691 aa22.91■■□□□ 1.26
MRPL55-218ENST00000366747 HNRNPMP52272 730 aaKnown RBP eCLIP22.91■■□□□ 1.26
MRPL55-218ENST00000366747 DIP2CQ9Y2E4 1556 aa22.91■■□□□ 1.26
MRPL55-218ENST00000366747 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
MRPL55-218ENST00000366747 MBD5Q9P267 1494 aa22.9■■□□□ 1.26
MRPL55-218ENST00000366747 MYOM3Q5VTT5 1437 aa22.89■■□□□ 1.25
MRPL55-218ENST00000366747 CAMSAP2Q08AD1 1489 aa22.87■■□□□ 1.25
MRPL55-218ENST00000366747 KIDINS220Q9ULH0 1771 aa22.86■■□□□ 1.25
MRPL55-218ENST00000366747 ABCA6Q8N139 1617 aa22.86■■□□□ 1.25
MRPL55-218ENST00000366747 ZNF644Q9H582 1327 aaPredicted RBP22.86■■□□□ 1.25
MRPL55-218ENST00000366747 RTEL1-TNFRSF6BF6WH68 1400 aa22.86■■□□□ 1.25
MRPL55-218ENST00000366747 AGLP35573 1532 aa22.86■■□□□ 1.25
MRPL55-218ENST00000366747 CCDC141Q6ZP82 1450 aa22.85■■□□□ 1.25
MRPL55-218ENST00000366747 ATP7AQ04656 1500 aa22.85■■□□□ 1.25
MRPL55-218ENST00000366747 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
MRPL55-218ENST00000366747 ARHGEF5Q12774 1597 aa22.83■■□□□ 1.25
MRPL55-218ENST00000366747 PTPRMP28827 1452 aa22.82■■□□□ 1.24
MRPL55-218ENST00000366747 MADDQ8WXG6 1647 aa22.81■■□□□ 1.24
MRPL55-218ENST00000366747 SIGLEC1Q9BZZ2 1709 aa22.8■■□□□ 1.24
MRPL55-218ENST00000366747 TSPY4P0CV99 314 aa22.76■■□□□ 1.23
MRPL55-218ENST00000366747 TSPY10P0CW01 314 aa22.76■■□□□ 1.23
MRPL55-218ENST00000366747 A2MP01023 1474 aa22.76■■□□□ 1.23
MRPL55-218ENST00000366747 PLXNC1O60486 1568 aa22.75■■□□□ 1.23
MRPL55-218ENST00000366747 MLECQ14165 292 aa22.74■■□□□ 1.23
MRPL55-218ENST00000366747 FGD6Q6ZV73 1430 aa22.74■■□□□ 1.23
MRPL55-218ENST00000366747 ADGBQ8N7X0 1667 aa22.72■■□□□ 1.23
MRPL55-218ENST00000366747 TCOF1Q13428 1488 aaKnown RBP22.71■■□□□ 1.23
MRPL55-218ENST00000366747 MAST1Q9Y2H9 1570 aa22.71■■□□□ 1.23
MRPL55-218ENST00000366747 RIMS1Q86UR5 1692 aaKnown RBP22.71■■□□□ 1.23
MRPL55-218ENST00000366747 FER1L4A9Z1Z3 1794 aa22.7■■□□□ 1.22
MRPL55-218ENST00000366747 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
MRPL55-218ENST00000366747 CNTLNQ9NXG0 1405 aa22.69■■□□□ 1.22
MRPL55-218ENST00000366747 DHX29Q7Z478 1369 aaKnown RBP22.69■■□□□ 1.22
MRPL55-218ENST00000366747 PPP6R1Q9UPN7 881 aa22.68■■□□□ 1.22
MRPL55-218ENST00000366747 SHANK2Q9UPX8 1470 aa22.67■■□□□ 1.22
MRPL55-218ENST00000366747 ESF1Q9H501 851 aaKnown RBP22.67■■□□□ 1.22
MRPL55-218ENST00000366747 ABCC5O15440 1437 aa22.61■■□□□ 1.21
MRPL55-218ENST00000366747 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
MRPL55-218ENST00000366747 DAPK1P53355 1430 aa22.6■■□□□ 1.21
MRPL55-218ENST00000366747 DNMT1P26358 1616 aaKnown RBP22.6■■□□□ 1.21
MRPL55-218ENST00000366747 CROCC2H7BZ55 1655 aa22.56■■□□□ 1.2
MRPL55-218ENST00000366747 MROH2AA6NES4 1674 aa22.55■■□□□ 1.2
MRPL55-218ENST00000366747 GGT6Q6P531 493 aa22.55■■□□□ 1.2
MRPL55-218ENST00000366747 DUOX2Q9NRD8 1548 aa22.55■■□□□ 1.2
MRPL55-218ENST00000366747 KIF3BO15066 747 aa22.54■■□□□ 1.2
MRPL55-218ENST00000366747 EIF2AK4Q9P2K8 1649 aaKnown RBP22.53■■□□□ 1.2
MRPL55-218ENST00000366747 LMTK3Q96Q04 1460 aa22.53■■□□□ 1.2
MRPL55-218ENST00000366747 ANKRD30AQ9BXX3 1397 aa22.52■■□□□ 1.2
MRPL55-218ENST00000366747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.52■■□□□ 1.2
MRPL55-218ENST00000366747 KIF15Q9NS87 1388 aa22.52■■□□□ 1.2
MRPL55-218ENST00000366747 ZMYM3Q14202 1370 aa22.51■■□□□ 1.19
MRPL55-218ENST00000366747 NPATQ14207 1427 aa22.51■■□□□ 1.19
MRPL55-218ENST00000366747 ERBINQ96RT1 1412 aa22.51■■□□□ 1.19
MRPL55-218ENST00000366747 FAM50AQ14320 339 aaKnown RBP22.51■■□□□ 1.19
MRPL55-218ENST00000366747 C3P01024 1663 aa22.49■■□□□ 1.19
MRPL55-218ENST00000366747 ADGRL2O95490 1459 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms