RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 EMP3P54852 163 aa5.45□□□□□ -1.54
RNU4-41P-201ENST00000364426 ZSWIM6Q9HCJ5 1215 aa5.45□□□□□ -1.54
RNU4-41P-201ENST00000364426 RIMBP2O15034 1052 aa5.44□□□□□ -1.54
RNU4-41P-201ENST00000364426 ZNF710Q8N1W2 664 aa5.43□□□□□ -1.54
RNU4-41P-201ENST00000364426 HS3ST6Q96QI5 342 aa5.42□□□□□ -1.54
RNU4-41P-201ENST00000364426 POTEB3A0JP26 581 aa5.41□□□□□ -1.54
RNU4-41P-201ENST00000364426 GPR153Q6NV75 609 aa5.41□□□□□ -1.54
RNU4-41P-201ENST00000364426 POTEBQ6S5H4 581 aa5.41□□□□□ -1.54
RNU4-41P-201ENST00000364426 FAM205CA6NFA0 338 aa5.4□□□□□ -1.54
RNU4-41P-201ENST00000364426 PPP1R37O75864 691 aa5.4□□□□□ -1.54
RNU4-41P-201ENST00000364426 C2orf72A6NCS6 295 aa5.39□□□□□ -1.55
RNU4-41P-201ENST00000364426 SLC34A2O95436 690 aa5.39□□□□□ -1.55
RNU4-41P-201ENST00000364426 CHGAP10645 457 aaKnown RBP5.39□□□□□ -1.55
RNU4-41P-201ENST00000364426 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
RNU4-41P-201ENST00000364426 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
RNU4-41P-201ENST00000364426 RYDENQ9NUL5 291 aaKnown RBP5.38□□□□□ -1.55
RNU4-41P-201ENST00000364426 NKX1-1Q15270 411 aaPredicted RBP5.37□□□□□ -1.55
RNU4-41P-201ENST00000364426 SPNS2Q8IVW8 549 aa5.37□□□□□ -1.55
RNU4-41P-201ENST00000364426 TMC2Q8TDI7 906 aa5.36□□□□□ -1.55
RNU4-41P-201ENST00000364426 ERBB3P21860 1342 aa5.36□□□□□ -1.55
RNU4-41P-201ENST00000364426 FOXK1P85037 733 aa5.34□□□□□ -1.55
RNU4-41P-201ENST00000364426 MMRN1Q13201 1228 aa5.34□□□□□ -1.55
RNU4-41P-201ENST00000364426 ARSIQ5FYB1 569 aa5.34□□□□□ -1.55
RNU4-41P-201ENST00000364426 VARS2Q5ST30 1063 aaKnown RBP5.34□□□□□ -1.55
RNU4-41P-201ENST00000364426 ZNF687Q8N1G0 1237 aa5.34□□□□□ -1.55
RNU4-41P-201ENST00000364426 ZNF316A6NFI3 1004 aaPredicted RBP5.33□□□□□ -1.56
RNU4-41P-201ENST00000364426 GPHNQ9NQX3 736 aaPredicted RBP5.33□□□□□ -1.56
RNU4-41P-201ENST00000364426 PTCD2Q8WV60 388 aaKnown RBP5.32□□□□□ -1.56
RNU4-41P-201ENST00000364426 GTPBP6O43824 516 aaPredicted RBP5.31□□□□□ -1.56
RNU4-41P-201ENST00000364426 KHSRPQ92945 711 aaKnown RBP eCLIP5.31□□□□□ -1.56
RNU4-41P-201ENST00000364426 PCDHGA4Q9Y5G9 962 aa5.31□□□□□ -1.56
RNU4-41P-201ENST00000364426 KDM4FA0A1W2PPD8 638 aa5.3□□□□□ -1.56
RNU4-41P-201ENST00000364426 PLPP6Q8IY26 295 aa5.3□□□□□ -1.56
RNU4-41P-201ENST00000364426 CRISPLD2Q9H0B8 497 aa5.3□□□□□ -1.56
RNU4-41P-201ENST00000364426 NUDT7P0C024 238 aa5.29□□□□□ -1.56
RNU4-41P-201ENST00000364426 DSG2Q14126 1118 aa5.29□□□□□ -1.56
RNU4-41P-201ENST00000364426 PSDA5PKW4 1024 aaPredicted RBP5.28□□□□□ -1.56
RNU4-41P-201ENST00000364426 PBX2P40425 430 aa5.28□□□□□ -1.56
RNU4-41P-201ENST00000364426 LHX6Q9UPM6 363 aa5.27□□□□□ -1.57
RNU4-41P-201ENST00000364426 PDE4AP27815 886 aa5.26□□□□□ -1.57
RNU4-41P-201ENST00000364426 PTGER2P43116 358 aa5.26□□□□□ -1.57
RNU4-41P-201ENST00000364426 NCKAP5LQ9HCH0 1330 aa5.25□□□□□ -1.57
RNU4-41P-201ENST00000364426 TBC1D12O60347 775 aa5.25□□□□□ -1.57
RNU4-41P-201ENST00000364426 OXER1Q8TDS5 423 aa5.25□□□□□ -1.57
RNU4-41P-201ENST00000364426 LSM11P83369 360 aaKnown RBP eCLIP5.24□□□□□ -1.57
RNU4-41P-201ENST00000364426 MFSD10Q14728 455 aa5.24□□□□□ -1.57
RNU4-41P-201ENST00000364426 PPP1R15BQ5SWA1 713 aa5.24□□□□□ -1.57
RNU4-41P-201ENST00000364426 DCAF8L2P0C7V8 631 aa5.23□□□□□ -1.57
RNU4-41P-201ENST00000364426 AMER1Q5JTC6 1135 aaPredicted RBP5.23□□□□□ -1.57
RNU4-41P-201ENST00000364426 POTEEQ6S8J3 1075 aa5.23□□□□□ -1.57
RNU4-41P-201ENST00000364426 MYT1LQ9UL68 1186 aa5.22□□□□□ -1.57
RNU4-41P-201ENST00000364426 ARHGAP33O14559 1287 aa5.21□□□□□ -1.58
RNU4-41P-201ENST00000364426 BBXQ8WY36 941 aaPredicted RBP5.21□□□□□ -1.58
RNU4-41P-201ENST00000364426 RNF166Q96A37 237 aaPredicted RBP5.21□□□□□ -1.58
RNU4-41P-201ENST00000364426 DDX27Q96GQ7 796 aaKnown RBP5.21□□□□□ -1.58
RNU4-41P-201ENST00000364426 PPP4R3BQ5MIZ7 849 aa5.2□□□□□ -1.58
RNU4-41P-201ENST00000364426 ANO8Q9HCE9 1232 aaPredicted RBP5.2□□□□□ -1.58
RNU4-41P-201ENST00000364426 TK2O00142 265 aa5.19□□□□□ -1.58
RNU4-41P-201ENST00000364426 ANKRD13DQ6ZTN6 518 aa5.19□□□□□ -1.58
RNU4-41P-201ENST00000364426 LARP6Q9BRS8 491 aaKnown RBP5.19□□□□□ -1.58
RNU4-41P-201ENST00000364426 CADPS2Q86UW7 1296 aa5.18□□□□□ -1.58
RNU4-41P-201ENST00000364426 UPF1Q92900 1129 aaKnown RBP eCLIP5.18□□□□□ -1.58
RNU4-41P-201ENST00000364426 AXIN2Q9Y2T1 843 aa5.18□□□□□ -1.58
RNU4-41P-201ENST00000364426 FOSBP53539 338 aa5.17□□□□□ -1.58
RNU4-41P-201ENST00000364426 CAMK2BQ13554 666 aa5.16□□□□□ -1.58
RNU4-41P-201ENST00000364426 ADGRD1Q6QNK2 874 aa5.16□□□□□ -1.58
RNU4-41P-201ENST00000364426 JPH4Q96JJ6 628 aa5.16□□□□□ -1.58
RNU4-41P-201ENST00000364426 BCL2L12Q9HB09 334 aa5.16□□□□□ -1.58
RNU4-41P-201ENST00000364426 RTN4Q9NQC3 1192 aaKnown RBP5.16□□□□□ -1.58
RNU4-41P-201ENST00000364426 HRO43593 1189 aa5.15□□□□□ -1.59
RNU4-41P-201ENST00000364426 EVI5O60447 810 aa5.15□□□□□ -1.59
RNU4-41P-201ENST00000364426 DMRTA1Q5VZB9 504 aa5.15□□□□□ -1.59
RNU4-41P-201ENST00000364426 SLC4A5Q9BY07 1137 aa5.15□□□□□ -1.59
RNU4-41P-201ENST00000364426 EMILIN3Q9NT22 766 aa5.15□□□□□ -1.59
RNU4-41P-201ENST00000364426 PSEN2P49810 448 aa5.14□□□□□ -1.59
RNU4-41P-201ENST00000364426 ZNF454Q8N9F8 522 aa5.14□□□□□ -1.59
RNU4-41P-201ENST00000364426 MAP3K9P80192 1104 aa5.13□□□□□ -1.59
RNU4-41P-201ENST00000364426 SPRYD3Q8NCJ5 442 aa5.13□□□□□ -1.59
RNU4-41P-201ENST00000364426 KCNH8Q96L42 1107 aa5.13□□□□□ -1.59
RNU4-41P-201ENST00000364426 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.13□□□□□ -1.59
RNU4-41P-201ENST00000364426 ZDHHC16Q969W1 377 aa5.12□□□□□ -1.59
RNU4-41P-201ENST00000364426 KCNK17Q96T54 332 aa5.12□□□□□ -1.59
RNU4-41P-201ENST00000364426 PTPREP23469 700 aa5.11□□□□□ -1.59
RNU4-41P-201ENST00000364426 VPS9D1Q9Y2B5 631 aa5.11□□□□□ -1.59
RNU4-41P-201ENST00000364426 PCDHGA10Q9Y5H3 936 aa5.1□□□□□ -1.59
RNU4-41P-201ENST00000364426 BHMG1C9JSJ3 638 aaPredicted RBP5.09□□□□□ -1.59
RNU4-41P-201ENST00000364426 PHF14O94880 888 aa5.09□□□□□ -1.59
RNU4-41P-201ENST00000364426 FBXW7Q969H0 707 aa5.09□□□□□ -1.59
RNU4-41P-201ENST00000364426 ZBED2Q9BTP6 218 aa5.09□□□□□ -1.59
RNU4-41P-201ENST00000364426 ADAM33Q9BZ11 813 aa5.09□□□□□ -1.59
RNU4-41P-201ENST00000364426 HCSTQ9UBK5 93 aa5.09□□□□□ -1.59
RNU4-41P-201ENST00000364426 ARIH1Q9Y4X5 557 aaPredicted RBP5.09□□□□□ -1.59
RNU4-41P-201ENST00000364426 PPP1R3GB7ZBB8 358 aa5.08□□□□□ -1.6
RNU4-41P-201ENST00000364426 TYW1BQ6NUM6 668 aa5.08□□□□□ -1.6
RNU4-41P-201ENST00000364426 EPAS1Q99814 870 aa5.08□□□□□ -1.6
RNU4-41P-201ENST00000364426 DPYSL4O14531 572 aa5.07□□□□□ -1.6
RNU4-41P-201ENST00000364426 PDIA6Q15084 440 aa5.07□□□□□ -1.6
RNU4-41P-201ENST00000364426 SPDYE16A6NNV3 312 aaPredicted RBP5.06□□□□□ -1.6
RNU4-41P-201ENST00000364426 PAXIP1Q6ZW49 1069 aaPredicted RBP5.06□□□□□ -1.6
RNU4-41P-201ENST00000364426 STAC3Q96MF2 364 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms