RNA–Protein interactions for RNA: ENST00000364281.1

SNORD56.5-201, Transcript of small nucleolar RNA, C/D box 56, humanhuman

BASIC

Gene SNORD56, Length 72 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD56.5-201ENST00000364281 ZC3H4Q9UPT8 1303 aaKnown RBP3.82□□□□□ -1.8
SNORD56.5-201ENST00000364281 TRAK2O60296 914 aa3.82□□□□□ -1.8
SNORD56.5-201ENST00000364281 KDM4AO75164 1064 aa3.82□□□□□ -1.8
SNORD56.5-201ENST00000364281 RETREG2Q8NC44 543 aa3.82□□□□□ -1.8
SNORD56.5-201ENST00000364281 MYH16Q9H6N6 1097 aa3.82□□□□□ -1.8
SNORD56.5-201ENST00000364281 PRDM10Q9NQV6 1147 aa3.82□□□□□ -1.8
SNORD56.5-201ENST00000364281 HMGB1P1B2RPK0 211 aaPredicted RBP3.81□□□□□ -1.8
SNORD56.5-201ENST00000364281 RTL5Q5HYW3 569 aaPredicted RBP3.81□□□□□ -1.8
SNORD56.5-201ENST00000364281 NOL8Q76FK4 1167 aaKnown RBP3.81□□□□□ -1.8
SNORD56.5-201ENST00000364281 CNPY4Q8N129 248 aa3.81□□□□□ -1.8
SNORD56.5-201ENST00000364281 GORABQ5T7V8 394 aa3.8□□□□□ -1.8
SNORD56.5-201ENST00000364281 SPTY2D1Q68D10 685 aaPredicted RBP3.8□□□□□ -1.8
SNORD56.5-201ENST00000364281 PIAS4Q8N2W9 510 aaPredicted RBP3.8□□□□□ -1.8
SNORD56.5-201ENST00000364281 TMTC2Q8N394 836 aa3.8□□□□□ -1.8
SNORD56.5-201ENST00000364281 IPO4Q8TEX9 1081 aaKnown RBP3.8□□□□□ -1.8
SNORD56.5-201ENST00000364281 WDR70Q9NW82 654 aa3.8□□□□□ -1.8
SNORD56.5-201ENST00000364281 RNF216Q9NWF9 866 aaPredicted RBP3.8□□□□□ -1.8
SNORD56.5-201ENST00000364281 SERPINA10Q9UK55 444 aa3.8□□□□□ -1.8
SNORD56.5-201ENST00000364281 MYT1LQ9UL68 1186 aa3.8□□□□□ -1.8
SNORD56.5-201ENST00000364281 SCAF1Q9H7N4 1312 aaKnown RBP3.79□□□□□ -1.8
SNORD56.5-201ENST00000364281 SPDYE4A6NLX3 237 aa3.79□□□□□ -1.8
SNORD56.5-201ENST00000364281 SLC4A2P04920 1241 aa3.79□□□□□ -1.8
SNORD56.5-201ENST00000364281 ERCC3P19447 782 aa3.79□□□□□ -1.8
SNORD56.5-201ENST00000364281 KCNA1Q09470 495 aa3.79□□□□□ -1.8
SNORD56.5-201ENST00000364281 IRF5Q13568 498 aa3.79□□□□□ -1.8
SNORD56.5-201ENST00000364281 CCDC97Q96F63 343 aaPredicted RBP3.79□□□□□ -1.8
SNORD56.5-201ENST00000364281 NAP1L2Q9ULW6 460 aaPredicted RBP3.79□□□□□ -1.8
SNORD56.5-201ENST00000364281 ARIH1Q9Y4X5 557 aaPredicted RBP3.79□□□□□ -1.8
SNORD56.5-201ENST00000364281 TPD52L2O43399 206 aaKnown RBP3.78□□□□□ -1.8
SNORD56.5-201ENST00000364281 SMARCA5O60264 1052 aaPredicted RBP3.78□□□□□ -1.8
SNORD56.5-201ENST00000364281 ONECUT3O60422 494 aaPredicted RBP3.78□□□□□ -1.8
SNORD56.5-201ENST00000364281 ZMYND10O75800 440 aa3.78□□□□□ -1.8
SNORD56.5-201ENST00000364281 MCCD1P59942 119 aaPredicted RBP3.78□□□□□ -1.8
SNORD56.5-201ENST00000364281 FTSJ3Q8IY81 847 aaKnown RBP3.78□□□□□ -1.8
SNORD56.5-201ENST00000364281 KCNV2Q8TDN2 545 aa3.78□□□□□ -1.8
SNORD56.5-201ENST00000364281 SECISBP2LQ93073 1101 aaKnown RBP3.78□□□□□ -1.8
SNORD56.5-201ENST00000364281 LAS1LQ9Y4W2 734 aaKnown RBP3.78□□□□□ -1.8
SNORD56.5-201ENST00000364281 GTPBP6O43824 516 aaPredicted RBP3.77□□□□□ -1.81
SNORD56.5-201ENST00000364281 PHF14O94880 888 aa3.77□□□□□ -1.81
SNORD56.5-201ENST00000364281 BRD1O95696 1058 aa3.77□□□□□ -1.81
SNORD56.5-201ENST00000364281 FAM43BQ6ZT52 329 aaPredicted RBP3.77□□□□□ -1.81
SNORD56.5-201ENST00000364281 IL27Q8NEV9 243 aa3.77□□□□□ -1.81
SNORD56.5-201ENST00000364281 UBA5Q9GZZ9 404 aa3.77□□□□□ -1.81
SNORD56.5-201ENST00000364281 GPBP1L1Q9HC44 474 aaPredicted RBP3.77□□□□□ -1.81
SNORD56.5-201ENST00000364281 PPME1Q9Y570 386 aa3.77□□□□□ -1.81
SNORD56.5-201ENST00000364281 ANKRD62A6NC57 917 aa3.76□□□□□ -1.81
SNORD56.5-201ENST00000364281 MARCH6O60337 910 aa3.76□□□□□ -1.81
SNORD56.5-201ENST00000364281 SREK1Q8WXA9 508 aaKnown RBP3.76□□□□□ -1.81
SNORD56.5-201ENST00000364281 DRC1Q96MC2 740 aa3.76□□□□□ -1.81
SNORD56.5-201ENST00000364281 YTHDC1Q96MU7 727 aaKnown RBP3.76□□□□□ -1.81
SNORD56.5-201ENST00000364281 C8orf37Q96NL8 207 aa3.76□□□□□ -1.81
SNORD56.5-201ENST00000364281 KDM4CQ9H3R0 1056 aa3.76□□□□□ -1.81
SNORD56.5-201ENST00000364281 CLGNO14967 610 aa3.75□□□□□ -1.81
SNORD56.5-201ENST00000364281 TCF3P15923 654 aa3.75□□□□□ -1.81
SNORD56.5-201ENST00000364281 WWC1Q8IX03 1113 aa3.75□□□□□ -1.81
SNORD56.5-201ENST00000364281 SGSM3Q96HU1 749 aa3.75□□□□□ -1.81
SNORD56.5-201ENST00000364281 HIRIP3Q9BW71 556 aaPredicted RBP3.75□□□□□ -1.81
SNORD56.5-201ENST00000364281 TERF2IPQ9NYB0 399 aa3.75□□□□□ -1.81
SNORD56.5-201ENST00000364281 RBM27Q9P2N5 1060 aaKnown RBP3.75□□□□□ -1.81
SNORD56.5-201ENST00000364281 UNCXA6NJT0 531 aa3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 VGFO15240 615 aaPredicted RBP3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 PPP1R15AO75807 674 aaPredicted RBP3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 MAPK8IP2Q13387 824 aaPredicted RBP3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 OS9Q13438 667 aaPredicted RBP3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 FAM50AQ14320 339 aaKnown RBP3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 NKX1-1Q15270 411 aaPredicted RBP3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 RALBP1Q15311 655 aa3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 TSR1Q2NL82 804 aaKnown RBP3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 CCDC181Q5TID7 509 aa3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 NME8Q8N427 588 aa3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 CLUAP1Q96AJ1 413 aa3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 AK7Q96M32 723 aa3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 MAGEC2Q9UBF1 373 aaPredicted RBP3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 SUGT1Q9Y2Z0 365 aa3.74□□□□□ -1.81
SNORD56.5-201ENST00000364281 RBM47A0AV96 593 aaKnown RBP3.73□□□□□ -1.81
SNORD56.5-201ENST00000364281 CALRP27797 417 aaKnown RBP3.73□□□□□ -1.81
SNORD56.5-201ENST00000364281 DEKP35659 375 aaKnown RBP3.73□□□□□ -1.81
SNORD56.5-201ENST00000364281 SND1Q7KZF4 910 aaKnown RBP eCLIP3.73□□□□□ -1.81
SNORD56.5-201ENST00000364281 PROSER2Q86WR7 435 aaPredicted RBP3.73□□□□□ -1.81
SNORD56.5-201ENST00000364281 MICAL1Q8TDZ2 1067 aa3.73□□□□□ -1.81
SNORD56.5-201ENST00000364281 MORC4Q8TE76 937 aa3.73□□□□□ -1.81
SNORD56.5-201ENST00000364281 TRIM41Q8WV44 630 aa3.73□□□□□ -1.81
SNORD56.5-201ENST00000364281 ZNF622Q969S3 477 aaKnown RBP eCLIP3.73□□□□□ -1.81
SNORD56.5-201ENST00000364281 TESPA1A2RU30 521 aaPredicted RBP3.72□□□□□ -1.81
SNORD56.5-201ENST00000364281 FAM193AP78312 1265 aa3.72□□□□□ -1.81
SNORD56.5-201ENST00000364281 TSHZ1Q6ZSZ6 1077 aa3.72□□□□□ -1.81
SNORD56.5-201ENST00000364281 UBXN4Q92575 508 aa3.72□□□□□ -1.81
SNORD56.5-201ENST00000364281 RYDENQ9NUL5 291 aaKnown RBP3.72□□□□□ -1.81
SNORD56.5-201ENST00000364281 KCNG1Q9UIX4 513 aa3.72□□□□□ -1.81
SNORD56.5-201ENST00000364281 EIF3JO75822 258 aaKnown RBP3.71□□□□□ -1.82
SNORD56.5-201ENST00000364281 MMP14P50281 582 aa3.71□□□□□ -1.82
SNORD56.5-201ENST00000364281 MYBPC2Q14324 1141 aa3.71□□□□□ -1.82
SNORD56.5-201ENST00000364281 LONRF3Q496Y0 759 aa3.71□□□□□ -1.82
SNORD56.5-201ENST00000364281 APBB1IPQ7Z5R6 666 aaPredicted RBP3.71□□□□□ -1.82
SNORD56.5-201ENST00000364281 SMC5Q8IY18 1101 aa3.71□□□□□ -1.82
SNORD56.5-201ENST00000364281 SDR16C5Q8N3Y7 309 aa3.71□□□□□ -1.82
SNORD56.5-201ENST00000364281 METTL14Q9HCE5 456 aaKnown RBP3.71□□□□□ -1.82
SNORD56.5-201ENST00000364281 SALL2Q9Y467 1007 aaPredicted RBP3.71□□□□□ -1.82
SNORD56.5-201ENST00000364281 EXOC5O00471 708 aa3.7□□□□□ -1.82
SNORD56.5-201ENST00000364281 LIG1P18858 919 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms