RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 VARS2Q5ST30 1063 aaKnown RBP5.96□□□□□ -1.46
RNU6-1048P-201ENST00000364054 POTEB3A0JP26 581 aa5.95□□□□□ -1.46
RNU6-1048P-201ENST00000364054 POTEBQ6S5H4 581 aa5.95□□□□□ -1.46
RNU6-1048P-201ENST00000364054 MS4A4AQ96JQ5 239 aa5.95□□□□□ -1.46
RNU6-1048P-201ENST00000364054 KRTAP3-3Q9BYR6 98 aa5.94□□□□□ -1.46
RNU6-1048P-201ENST00000364054 KRTAP3-2Q9BYR7 98 aa5.94□□□□□ -1.46
RNU6-1048P-201ENST00000364054 PKD2Q13563 968 aa5.92□□□□□ -1.46
RNU6-1048P-201ENST00000364054 TMEM92Q6UXU6 159 aa5.92□□□□□ -1.46
RNU6-1048P-201ENST00000364054 RYDENQ9NUL5 291 aaKnown RBP5.92□□□□□ -1.46
RNU6-1048P-201ENST00000364054 ARSIQ5FYB1 569 aa5.9□□□□□ -1.46
RNU6-1048P-201ENST00000364054 FBXO22Q8NEZ5 403 aa5.9□□□□□ -1.46
RNU6-1048P-201ENST00000364054 RGL2O15211 777 aa5.89□□□□□ -1.47
RNU6-1048P-201ENST00000364054 TMC2Q8TDI7 906 aa5.89□□□□□ -1.47
RNU6-1048P-201ENST00000364054 RNF166Q96A37 237 aaPredicted RBP5.89□□□□□ -1.47
RNU6-1048P-201ENST00000364054 MFRPQ9BY79 579 aa5.89□□□□□ -1.47
RNU6-1048P-201ENST00000364054 GPR153Q6NV75 609 aa5.87□□□□□ -1.47
RNU6-1048P-201ENST00000364054 ANKRD13DQ6ZTN6 518 aa5.87□□□□□ -1.47
RNU6-1048P-201ENST00000364054 MYT1LQ9UL68 1186 aa5.87□□□□□ -1.47
RNU6-1048P-201ENST00000364054 ZNF687Q8N1G0 1237 aa5.86□□□□□ -1.47
RNU6-1048P-201ENST00000364054 KHSRPQ92945 711 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNU6-1048P-201ENST00000364054 C2orf72A6NCS6 295 aa5.85□□□□□ -1.47
RNU6-1048P-201ENST00000364054 ZNF316A6NFI3 1004 aaPredicted RBP5.85□□□□□ -1.47
RNU6-1048P-201ENST00000364054 PTGER2P43116 358 aa5.85□□□□□ -1.47
RNU6-1048P-201ENST00000364054 HS6ST3Q8IZP7 471 aa5.85□□□□□ -1.47
RNU6-1048P-201ENST00000364054 PSDA5PKW4 1024 aaPredicted RBP5.83□□□□□ -1.48
RNU6-1048P-201ENST00000364054 SLC34A2O95436 690 aa5.83□□□□□ -1.48
RNU6-1048P-201ENST00000364054 NUDT7P0C024 238 aa5.83□□□□□ -1.48
RNU6-1048P-201ENST00000364054 KIF3CO14782 793 aa5.81□□□□□ -1.48
RNU6-1048P-201ENST00000364054 TBC1D12O60347 775 aa5.81□□□□□ -1.48
RNU6-1048P-201ENST00000364054 CHGAP10645 457 aaKnown RBP5.81□□□□□ -1.48
RNU6-1048P-201ENST00000364054 PBX2P40425 430 aa5.81□□□□□ -1.48
RNU6-1048P-201ENST00000364054 LSM11P83369 360 aaKnown RBP eCLIP5.8□□□□□ -1.48
RNU6-1048P-201ENST00000364054 PCDHGA4Q9Y5G9 962 aa5.8□□□□□ -1.48
RNU6-1048P-201ENST00000364054 DNAJC5Q9H3Z4 198 aa5.79□□□□□ -1.48
RNU6-1048P-201ENST00000364054 LHX6Q9UPM6 363 aa5.78□□□□□ -1.48
RNU6-1048P-201ENST00000364054 PPP1R37O75864 691 aa5.77□□□□□ -1.49
RNU6-1048P-201ENST00000364054 KCNH8Q96L42 1107 aa5.77□□□□□ -1.49
RNU6-1048P-201ENST00000364054 GPHNQ9NQX3 736 aaPredicted RBP5.77□□□□□ -1.49
RNU6-1048P-201ENST00000364054 FOXK1P85037 733 aa5.76□□□□□ -1.49
RNU6-1048P-201ENST00000364054 STAC3Q96MF2 364 aa5.76□□□□□ -1.49
RNU6-1048P-201ENST00000364054 AXIN2Q9Y2T1 843 aa5.76□□□□□ -1.49
RNU6-1048P-201ENST00000364054 PLPP6Q8IY26 295 aa5.74□□□□□ -1.49
RNU6-1048P-201ENST00000364054 PTCD2Q8WV60 388 aaKnown RBP5.74□□□□□ -1.49
RNU6-1048P-201ENST00000364054 PPP4R3BQ5MIZ7 849 aa5.73□□□□□ -1.49
RNU6-1048P-201ENST00000364054 ARHGAP33O14559 1287 aa5.72□□□□□ -1.49
RNU6-1048P-201ENST00000364054 DCAF8L2P0C7V8 631 aa5.72□□□□□ -1.49
RNU6-1048P-201ENST00000364054 PDE4AP27815 886 aa5.72□□□□□ -1.49
RNU6-1048P-201ENST00000364054 DSG2Q14126 1118 aa5.7□□□□□ -1.5
RNU6-1048P-201ENST00000364054 ADGRD1Q6QNK2 874 aa5.7□□□□□ -1.5
RNU6-1048P-201ENST00000364054 UPF1Q92900 1129 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU6-1048P-201ENST00000364054 HCSTQ9UBK5 93 aa5.7□□□□□ -1.5
RNU6-1048P-201ENST00000364054 KCNK17Q96T54 332 aa5.69□□□□□ -1.5
RNU6-1048P-201ENST00000364054 TK2O00142 265 aa5.68□□□□□ -1.5
RNU6-1048P-201ENST00000364054 PSEN2P49810 448 aa5.68□□□□□ -1.5
RNU6-1048P-201ENST00000364054 PLA2G2EQ9NZK7 142 aa5.68□□□□□ -1.5
RNU6-1048P-201ENST00000364054 PPP1R15BQ5SWA1 713 aa5.67□□□□□ -1.5
RNU6-1048P-201ENST00000364054 POTEEQ6S8J3 1075 aa5.67□□□□□ -1.5
RNU6-1048P-201ENST00000364054 NKX1-1Q15270 411 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1048P-201ENST00000364054 DMRTA1Q5VZB9 504 aa5.66□□□□□ -1.5
RNU6-1048P-201ENST00000364054 KCTD12Q96CX2 325 aaKnown RBP5.66□□□□□ -1.5
RNU6-1048P-201ENST00000364054 CRISPLD2Q9H0B8 497 aa5.66□□□□□ -1.5
RNU6-1048P-201ENST00000364054 ZNF454Q8N9F8 522 aa5.65□□□□□ -1.5
RNU6-1048P-201ENST00000364054 OXER1Q8TDS5 423 aa5.65□□□□□ -1.5
RNU6-1048P-201ENST00000364054 KDM4FA0A1W2PPD8 638 aa5.64□□□□□ -1.51
RNU6-1048P-201ENST00000364054 GOLGA8CPA6NN73 597 aa5.64□□□□□ -1.51
RNU6-1048P-201ENST00000364054 DDX27Q96GQ7 796 aaKnown RBP5.64□□□□□ -1.51
RNU6-1048P-201ENST00000364054 GTPBP6O43824 516 aaPredicted RBP5.63□□□□□ -1.51
RNU6-1048P-201ENST00000364054 MAP3K9P80192 1104 aa5.62□□□□□ -1.51
RNU6-1048P-201ENST00000364054 LARP6Q9BRS8 491 aaKnown RBP5.62□□□□□ -1.51
RNU6-1048P-201ENST00000364054 PTPREP23469 700 aa5.61□□□□□ -1.51
RNU6-1048P-201ENST00000364054 PTPN5P54829 565 aa5.61□□□□□ -1.51
RNU6-1048P-201ENST00000364054 JPH4Q96JJ6 628 aa5.6□□□□□ -1.51
RNU6-1048P-201ENST00000364054 BCL2L12Q9HB09 334 aa5.6□□□□□ -1.51
RNU6-1048P-201ENST00000364054 HRO43593 1189 aa5.59□□□□□ -1.51
RNU6-1048P-201ENST00000364054 MFSD10Q14728 455 aa5.59□□□□□ -1.51
RNU6-1048P-201ENST00000364054 BBXQ8WY36 941 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1048P-201ENST00000364054 SLC4A5Q9BY07 1137 aa5.59□□□□□ -1.51
RNU6-1048P-201ENST00000364054 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1048P-201ENST00000364054 VPS9D1Q9Y2B5 631 aa5.59□□□□□ -1.51
RNU6-1048P-201ENST00000364054 NCKAP5LQ9HCH0 1330 aa5.58□□□□□ -1.52
RNU6-1048P-201ENST00000364054 EVI5O60447 810 aa5.58□□□□□ -1.52
RNU6-1048P-201ENST00000364054 AMER1Q5JTC6 1135 aaPredicted RBP5.58□□□□□ -1.52
RNU6-1048P-201ENST00000364054 MRPL50Q8N5N7 158 aaKnown RBP5.58□□□□□ -1.52
RNU6-1048P-201ENST00000364054 ZDHHC16Q969W1 377 aa5.58□□□□□ -1.52
RNU6-1048P-201ENST00000364054 ANO8Q9HCE9 1232 aaPredicted RBP5.58□□□□□ -1.52
RNU6-1048P-201ENST00000364054 FOSBP53539 338 aa5.57□□□□□ -1.52
RNU6-1048P-201ENST00000364054 FBXW7Q969H0 707 aa5.57□□□□□ -1.52
RNU6-1048P-201ENST00000364054 NBPF3Q9H094 633 aa5.57□□□□□ -1.52
RNU6-1048P-201ENST00000364054 WNT2BQ93097 391 aa5.56□□□□□ -1.52
RNU6-1048P-201ENST00000364054 SPRYD3Q8NCJ5 442 aa5.54□□□□□ -1.52
RNU6-1048P-201ENST00000364054 PHF14O94880 888 aa5.53□□□□□ -1.52
RNU6-1048P-201ENST00000364054 TYW1BQ6NUM6 668 aa5.53□□□□□ -1.52
RNU6-1048P-201ENST00000364054 THSD4Q6ZMP0 1018 aa5.53□□□□□ -1.52
RNU6-1048P-201ENST00000364054 EPAS1Q99814 870 aa5.53□□□□□ -1.52
RNU6-1048P-201ENST00000364054 ZBED2Q9BTP6 218 aa5.53□□□□□ -1.52
RNU6-1048P-201ENST00000364054 ADAM33Q9BZ11 813 aa5.53□□□□□ -1.52
RNU6-1048P-201ENST00000364054 PPP1R3GB7ZBB8 358 aa5.52□□□□□ -1.53
RNU6-1048P-201ENST00000364054 ANKK1Q8NFD2 765 aa5.52□□□□□ -1.53
RNU6-1048P-201ENST00000364054 WDR70Q9NW82 654 aa5.51□□□□□ -1.53
RNU6-1048P-201ENST00000364054 ONECUT3O60422 494 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms