RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 C2orf72A6NCS6 295 aa11.18□□□□□ -0.62
RNU6-553P-201ENST00000364047 KIF3CO14782 793 aa11.16□□□□□ -0.62
RNU6-553P-201ENST00000364047 SNPHO15079 494 aa11.16□□□□□ -0.62
RNU6-553P-201ENST00000364047 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
RNU6-553P-201ENST00000364047 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
RNU6-553P-201ENST00000364047 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
RNU6-553P-201ENST00000364047 CRISPLD2Q9H0B8 497 aa11.1□□□□□ -0.63
RNU6-553P-201ENST00000364047 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
RNU6-553P-201ENST00000364047 HOXB3P14651 431 aaPredicted RBP11.09□□□□□ -0.63
RNU6-553P-201ENST00000364047 PDE4AP27815 886 aa11.09□□□□□ -0.63
RNU6-553P-201ENST00000364047 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
RNU6-553P-201ENST00000364047 PLCB2Q00722 1185 aa11.08□□□□□ -0.64
RNU6-553P-201ENST00000364047 FOXK1P85037 733 aa11.07□□□□□ -0.64
RNU6-553P-201ENST00000364047 DSG2Q14126 1118 aa11.07□□□□□ -0.64
RNU6-553P-201ENST00000364047 ZNF710Q8N1W2 664 aa11.06□□□□□ -0.64
RNU6-553P-201ENST00000364047 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
RNU6-553P-201ENST00000364047 ST18O60284 1047 aa11.05□□□□□ -0.64
RNU6-553P-201ENST00000364047 PLPP6Q8IY26 295 aa11.05□□□□□ -0.64
RNU6-553P-201ENST00000364047 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
RNU6-553P-201ENST00000364047 PPP1R15BQ5SWA1 713 aa11.04□□□□□ -0.64
RNU6-553P-201ENST00000364047 LCE2DQ5TA82 110 aaPredicted RBP11.04□□□□□ -0.64
RNU6-553P-201ENST00000364047 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
RNU6-553P-201ENST00000364047 TSHZ2Q9NRE2 1034 aa11.02□□□□□ -0.65
RNU6-553P-201ENST00000364047 MFSD10Q14728 455 aa11□□□□□ -0.65
RNU6-553P-201ENST00000364047 ZSWIM6Q9HCJ5 1215 aa10.98□□□□□ -0.65
RNU6-553P-201ENST00000364047 SLC34A2O95436 690 aa10.97□□□□□ -0.65
RNU6-553P-201ENST00000364047 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
RNU6-553P-201ENST00000364047 HOXB1P14653 301 aaPredicted RBP10.95□□□□□ -0.66
RNU6-553P-201ENST00000364047 ARSIQ5FYB1 569 aa10.95□□□□□ -0.66
RNU6-553P-201ENST00000364047 GPR153Q6NV75 609 aa10.94□□□□□ -0.66
RNU6-553P-201ENST00000364047 PCDHGA4Q9Y5G9 962 aa10.94□□□□□ -0.66
RNU6-553P-201ENST00000364047 POTEMA6NI47 508 aa10.93□□□□□ -0.66
RNU6-553P-201ENST00000364047 HAP1P54257 671 aaPredicted RBP10.93□□□□□ -0.66
RNU6-553P-201ENST00000364047 EMP3P54852 163 aa10.93□□□□□ -0.66
RNU6-553P-201ENST00000364047 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
RNU6-553P-201ENST00000364047 PTCD2Q8WV60 388 aaKnown RBP10.92□□□□□ -0.66
RNU6-553P-201ENST00000364047 UPF1Q92900 1129 aaKnown RBP eCLIP10.92□□□□□ -0.66
RNU6-553P-201ENST00000364047 WDR70Q9NW82 654 aa10.92□□□□□ -0.66
RNU6-553P-201ENST00000364047 KHSRPQ92945 711 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNU6-553P-201ENST00000364047 TBC1D12O60347 775 aa10.89□□□□□ -0.67
RNU6-553P-201ENST00000364047 OXER1Q8TDS5 423 aa10.89□□□□□ -0.67
RNU6-553P-201ENST00000364047 NUDT7P0C024 238 aa10.87□□□□□ -0.67
RNU6-553P-201ENST00000364047 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
RNU6-553P-201ENST00000364047 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
RNU6-553P-201ENST00000364047 FAM205CA6NFA0 338 aa10.85□□□□□ -0.67
RNU6-553P-201ENST00000364047 ERBB3P21860 1342 aa10.84□□□□□ -0.67
RNU6-553P-201ENST00000364047 E2F4Q16254 413 aa10.84□□□□□ -0.67
RNU6-553P-201ENST00000364047 MAP3K9P80192 1104 aa10.82□□□□□ -0.68
RNU6-553P-201ENST00000364047 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
RNU6-553P-201ENST00000364047 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
RNU6-553P-201ENST00000364047 VARS2Q5ST30 1063 aaKnown RBP10.8□□□□□ -0.68
RNU6-553P-201ENST00000364047 KDM4FA0A1W2PPD8 638 aa10.79□□□□□ -0.68
RNU6-553P-201ENST00000364047 DPYSL4O14531 572 aa10.79□□□□□ -0.68
RNU6-553P-201ENST00000364047 LHX6Q9UPM6 363 aa10.79□□□□□ -0.68
RNU6-553P-201ENST00000364047 POTEB3A0JP26 581 aa10.78□□□□□ -0.68
RNU6-553P-201ENST00000364047 POTEBQ6S5H4 581 aa10.78□□□□□ -0.68
RNU6-553P-201ENST00000364047 EVI5O60447 810 aa10.77□□□□□ -0.69
RNU6-553P-201ENST00000364047 CDAN1Q8IWY9 1227 aa10.75□□□□□ -0.69
RNU6-553P-201ENST00000364047 KCNV2Q8TDN2 545 aa10.73□□□□□ -0.69
RNU6-553P-201ENST00000364047 KDM2AQ9Y2K7 1162 aa10.73□□□□□ -0.69
RNU6-553P-201ENST00000364047 PSDA5PKW4 1024 aaPredicted RBP10.72□□□□□ -0.69
RNU6-553P-201ENST00000364047 VSIG10Q8N0Z9 540 aa10.72□□□□□ -0.69
RNU6-553P-201ENST00000364047 ANO8Q9HCE9 1232 aaPredicted RBP10.72□□□□□ -0.69
RNU6-553P-201ENST00000364047 PCDH10Q9P2E7 1040 aa10.71□□□□□ -0.69
RNU6-553P-201ENST00000364047 ARIH1Q9Y4X5 557 aaPredicted RBP10.71□□□□□ -0.69
RNU6-553P-201ENST00000364047 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
RNU6-553P-201ENST00000364047 PDIA6Q15084 440 aa10.69□□□□□ -0.7
RNU6-553P-201ENST00000364047 ZNF687Q8N1G0 1237 aa10.69□□□□□ -0.7
RNU6-553P-201ENST00000364047 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
RNU6-553P-201ENST00000364047 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
RNU6-553P-201ENST00000364047 ZNF454Q8N9F8 522 aa10.68□□□□□ -0.7
RNU6-553P-201ENST00000364047 ARHGEF1Q92888 912 aaKnown RBP10.67□□□□□ -0.7
RNU6-553P-201ENST00000364047 JPH4Q96JJ6 628 aa10.67□□□□□ -0.7
RNU6-553P-201ENST00000364047 FOSBP53539 338 aa10.66□□□□□ -0.7
RNU6-553P-201ENST00000364047 DDX12PQ92771 950 aa10.63□□□□□ -0.71
RNU6-553P-201ENST00000364047 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
RNU6-553P-201ENST00000364047 KRTAP3-2Q9BYR7 98 aa10.63□□□□□ -0.71
RNU6-553P-201ENST00000364047 PBX2P40425 430 aa10.62□□□□□ -0.71
RNU6-553P-201ENST00000364047 PTGER2P43116 358 aa10.61□□□□□ -0.71
RNU6-553P-201ENST00000364047 ZDHHC16Q969W1 377 aa10.61□□□□□ -0.71
RNU6-553P-201ENST00000364047 PCDHGA10Q9Y5H3 936 aa10.61□□□□□ -0.71
RNU6-553P-201ENST00000364047 PHF14O94880 888 aa10.6□□□□□ -0.71
RNU6-553P-201ENST00000364047 AXIN2Q9Y2T1 843 aa10.6□□□□□ -0.71
RNU6-553P-201ENST00000364047 TYW1BQ6NUM6 668 aa10.59□□□□□ -0.71
RNU6-553P-201ENST00000364047 POTEEQ6S8J3 1075 aa10.59□□□□□ -0.71
RNU6-553P-201ENST00000364047 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
RNU6-553P-201ENST00000364047 EPAS1Q99814 870 aa10.58□□□□□ -0.72
RNU6-553P-201ENST00000364047 ADAM33Q9BZ11 813 aa10.58□□□□□ -0.72
RNU6-553P-201ENST00000364047 GRXCR2A6NFK2 248 aa10.57□□□□□ -0.72
RNU6-553P-201ENST00000364047 NBR1Q14596 966 aa10.57□□□□□ -0.72
RNU6-553P-201ENST00000364047 FBXW7Q969H0 707 aa10.57□□□□□ -0.72
RNU6-553P-201ENST00000364047 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
RNU6-553P-201ENST00000364047 KCNK17Q96T54 332 aa10.57□□□□□ -0.72
RNU6-553P-201ENST00000364047 BCL2L12Q9HB09 334 aa10.57□□□□□ -0.72
RNU6-553P-201ENST00000364047 PSEN2P49810 448 aa10.56□□□□□ -0.72
RNU6-553P-201ENST00000364047 LSM11P83369 360 aaKnown RBP eCLIP10.55□□□□□ -0.72
RNU6-553P-201ENST00000364047 PTPREP23469 700 aa10.54□□□□□ -0.72
RNU6-553P-201ENST00000364047 ANKRD13DQ6ZTN6 518 aa10.53□□□□□ -0.72
RNU6-553P-201ENST00000364047 RBM33Q96EV2 1170 aaKnown RBP10.53□□□□□ -0.72
RNU6-553P-201ENST00000364047 SEMA3EO15041 775 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms